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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0616
         (674 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)              66   2e-11
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)              66   2e-11
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)                66   2e-11
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)              66   3e-11
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)               65   6e-11
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)              64   7e-11
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)              64   1e-10
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)                64   1e-10
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)                64   1e-10
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)              63   2e-10
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)              63   2e-10
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)              63   2e-10
SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.)              62   3e-10
SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)              62   4e-10
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)                62   5e-10
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)                 61   9e-10
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)                   60   1e-09
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)                60   2e-09
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)              59   4e-09
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)              59   4e-09
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)              58   6e-09
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)              58   6e-09
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)                57   1e-08
SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)                     57   1e-08
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)               57   1e-08
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)                56   2e-08
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)              56   2e-08
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)               55   5e-08
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)                 55   6e-08
SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)              54   1e-07
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)              54   1e-07
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)              54   1e-07
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)              53   2e-07
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)                52   3e-07
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)                52   3e-07
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   3e-07
SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)              52   6e-07
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   6e-07
SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)              52   6e-07
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)              51   1e-06
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)               51   1e-06
SB_23995| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-05)              50   1e-06
SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   2e-06
SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)               48   9e-06
SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)                45   5e-05
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)                   45   6e-05
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)                    45   6e-05
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   9e-05
SB_20928| Best HMM Match : NHL (HMM E-Value=0)                         44   1e-04
SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12)              44   1e-04
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   1e-04
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)                 44   1e-04
SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)              44   1e-04
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   2e-04
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)              42   5e-04
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)                 42   5e-04
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)              42   5e-04
SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019)               42   6e-04
SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   8e-04
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)                    41   0.001
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)               41   0.001
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)                40   0.001
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)                     40   0.001
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_15354| Best HMM Match : NHL (HMM E-Value=4.4e-14)                   38   0.006
SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012)               38   0.007
SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)                38   0.007
SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25)               38   0.007
SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.010
SB_31924| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00073)              38   0.010
SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12)              37   0.013
SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17)                 37   0.013
SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10)              36   0.023
SB_14207| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0048)               36   0.023
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.023
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)            36   0.023
SB_58465| Best HMM Match : zf-B_box (HMM E-Value=0.00022)              34   0.12 
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)                 34   0.12 
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)              33   0.16 
SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09)               33   0.16 
SB_12693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0014)          33   0.16 
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.21 
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)              33   0.21 
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)              33   0.21 
SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.28 
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.28 
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)              33   0.28 
SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.37 
SB_18583| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.49 
SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.64 
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.64 
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)                31   0.85 
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)                31   0.85 
SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)              31   1.1  
SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)                31   1.1  
SB_59800| Best HMM Match : SPRY (HMM E-Value=7.8e-05)                  30   1.5  
SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035)               30   1.5  
SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.0  
SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06)                    30   2.0  
SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)              29   2.6  
SB_49784| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)              29   2.6  
SB_38758| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)                      29   3.4  
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.4  
SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)                  29   3.4  
SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.5  
SB_698| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00037)                29   4.5  
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)                   28   6.0  
SB_43998| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.0  
SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.0  
SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.)                28   6.0  
SB_47760| Best HMM Match : DUF1168 (HMM E-Value=2.1)                   28   7.9  
SB_4531| Best HMM Match : zf-C3HC4 (HMM E-Value=0.098)                 28   7.9  
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)                     28   7.9  

>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
          Length = 442

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           + TC+IC E F DP+VL CFH+FCR CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 12  EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPADVPSL 71

Query: 532 LTNLVIAAAV 561
             N +I + +
Sbjct: 72  KVNFMINSII 81


>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
          Length = 291

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           + TC+IC E F DP+VL CFH+FCR CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 12  EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPADVPSL 71

Query: 532 LTNLVIAAAV 561
             N +I + +
Sbjct: 72  KVNFMINSII 81


>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
          Length = 745

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           + TC+IC E F DP+VL CFH+FCR CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 12  EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPADVPSL 71

Query: 532 LTNLVIAAAV 561
             N +I + +
Sbjct: 72  KVNFMINSII 81


>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
          Length = 405

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           + TC+IC E F DP+VL CFH+FCR CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 11  EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPADVPSL 70

Query: 532 LTNLVI 549
             N +I
Sbjct: 71  KVNFMI 76


>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2342

 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           + TC++C E F DP+VL CFH+FCR CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 12  EVTCSLCIEHFNDPRVLPCFHSFCRHCLEELAVHSEGKGKLVCPLCKAEFQISPADVPSL 71

Query: 532 LTNLVI 549
             N +I
Sbjct: 72  KVNFMI 77


>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
          Length = 355

 Score = 64.5 bits (150), Expect = 7e-11
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           +  C+IC E F DP+VL CFH+FCR CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 12  EVRCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPADVPSL 71

Query: 532 LTNLVIAAAVDQD 570
             N +I   +  D
Sbjct: 72  KVNFMILPLLTSD 84


>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 667

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           + TC+IC E F DP+VL C H+FCR CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 17  EVTCSICIEHFDDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPADVSSL 76

Query: 532 LTNLVIAAAV 561
             N +I + +
Sbjct: 77  KVNFMINSII 86


>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
          Length = 463

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           + TC+IC E F DP+VL C H+FCR CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 12  EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPADVSSL 71

Query: 532 LTNLVIAAAV 561
             N +I + +
Sbjct: 72  KVNFMINSII 81


>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
          Length = 119

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           + TC+IC E F DP+VL C H+FCR CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 12  EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPADVPSL 71

Query: 532 LTNLVIAAAV 561
             N +I + +
Sbjct: 72  KVNFMINSII 81


>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 639

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           + TC++C E F DP+VL C H+FCR CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 12  EVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPADVSSL 71

Query: 532 LTNLVIAAAV 561
             N +I + +
Sbjct: 72  KVNFMINSII 81


>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 391

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           + TC++C E F DP+VL C H+FCR CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 12  EVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPADVPSL 71

Query: 532 LTNLVIAAAVDQDAELLSSGRQTSSPL 612
             N +I + +     LL+S      P+
Sbjct: 72  KVNFMINSIISV-LPLLTSEDSKKKPV 97


>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 887

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = +1

Query: 325 SAVCDLRDFDGLDTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPDRV-TCVTCRVDT 501
           SAV   R  D     C IC+ET+ +PKVL C H+FC+ CLD+     +RV  C TC+   
Sbjct: 2   SAVLVNRIQDHYRLVCGICQETYNNPKVLPCLHSFCQNCLDKSIRSQERVLVCPTCQCSV 61

Query: 502 QLPPGGVDSLLTNLVI 549
            +P  G+++   N  I
Sbjct: 62  PVPAKGIEAFPVNFFI 77


>SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 288

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACL---DREQTHPDRVTCVTCRVDTQLPPGGVDSLLTN 540
           C  C + F +PK+L+C HTFC+ CL   D      + + C  CR  T +P  GV+SL +N
Sbjct: 16  CRACHKVFTEPKILDCLHTFCQKCLGTHDILGAGTNSIVCPLCRKPTPIPESGVESLPSN 75

Query: 541 LVIAAAVDQ 567
            ++  A+DQ
Sbjct: 76  FLLNNALDQ 84


>SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)
          Length = 455

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           + TC+IC E F DP+VL CFH+FC  CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 12  EVTCSICIEHFNDPRVLPCFHSFCLHCLEELAVHSEGRGKLVCPLCKAEFQISPADVLSL 71

Query: 532 LTNLVIAAAV 561
             N +I + +
Sbjct: 72  KVNFMINSII 81


>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
          Length = 629

 Score = 61.7 bits (143), Expect = 5e-10
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           + TC++C E F DP+VL C H+FCR CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 132 EVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGKGKLVCPLCKSEFQISPADVPSL 191

Query: 532 LTNLVI 549
             N +I
Sbjct: 192 KVNFMI 197


>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
          Length = 316

 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQLPPGGVDSL 531
           + TC+IC E   DP+VL C H+FCR CL+    H +   ++ C  C+ + Q+ P  V SL
Sbjct: 12  EVTCSICIEHLNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPADVPSL 71

Query: 532 LTNLVI 549
             N +I
Sbjct: 72  KVNFMI 77


>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
          Length = 645

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = +1

Query: 298 SGSSPPASDSAVCDLRDFDGLDTTCAICRETFIDPKVLNCFHTFCRACLDR-EQTHPDRV 474
           SGSS  +S S++  +R+    + TC++C E F +PK+L CFHTFC+ CL++ +Q+    +
Sbjct: 3   SGSSI-SSQSSIEKVRE----ELTCSVCLEQFREPKMLPCFHTFCKECLEKTKQSFRGNL 57

Query: 475 TCVTCRVDTQLPPGG-VDSLLTNLVIAAAVD 564
            C TCR  T +     +  L  N ++   +D
Sbjct: 58  LCPTCRTKTSVTEHEMIQKLPNNFIVNRVLD 88


>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
          Length = 470

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLD--REQTHPDRVTCVTCRVDTQLPPGGVDSLL 534
           + TCAIC E F DP++L C HTFCR CL+   E +   ++ C  C+V+ ++    + SL 
Sbjct: 12  EVTCAICIEHFTDPRLLPCLHTFCRHCLEDLAEHSGKGKLVCPLCKVEYEIAVADIPSLK 71

Query: 535 TNLVI 549
            N  I
Sbjct: 72  VNFPI 76


>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
          Length = 584

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
 Frame = +1

Query: 352 DGLDTTCAICRETFIDPKVLNCFHTFCRACLD--REQTHPDRVTCVTCRVDTQLPPGGV- 522
           D  D TC +C E + DP+VL C HT+CR CL+   E +  D ++C  CR   Q+    V 
Sbjct: 10  DVKDVTCCLCLEQYQDPRVLACLHTYCRHCLESLAEHSQGDSISCPQCREKIQISVDKVQ 69

Query: 523 ----DSLLTNLVIAAAVDQ 567
               D LL+NL+   ++ Q
Sbjct: 70  NLKEDFLLSNLIKRISLSQ 88


>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 549

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVL-NCFHTFCRACLDREQTHPDR-VTCVTCRVDTQLPPGGVDSLL 534
           + TC +C E   +PK L +C H  C+ CLDR   + ++ + C TCR  T +P GGV +L 
Sbjct: 14  ELTCPVCLEELKEPKCLTSCAHNVCKPCLDRMTFNGEKEIRCPTCRRSTLIPDGGVKALP 73

Query: 535 TNLVIAAAVD 564
           TN ++   ++
Sbjct: 74  TNTILVRLLE 83


>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
          Length = 581

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDR-EQTHPDRVTCVTCRVDTQLPPGGVDSLLTNLV 546
           C +C E F +P++L C HTFC+ CL+         ++C +CR+D  L   G++    N V
Sbjct: 145 CPLCHEMFANPRLLPCLHTFCKRCLENLVPPRSHTLSCPSCRLDVALGERGINGFAPNFV 204

Query: 547 IAAAVD 564
           +   +D
Sbjct: 205 VTTMID 210


>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
          Length = 207

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
 Frame = +1

Query: 370 CAICRETFIDPKVLN-CFHTFCRACLDREQTHPDR-VTCVTCRVDTQLPPGGVDSLLTNL 543
           C++C E F DP+ L  C H+FC+ CL +  +   + + C  CR  T +P  GV  L  N 
Sbjct: 68  CSVCYEVFSDPRTLTACLHSFCKECLHKMLSKRSKYIHCPLCRKKTAVPRRGVKGLPLNS 127

Query: 544 VIAAAVD-QDAELLSSGRQTSSPLGSLHRLQVQ 639
           VI   VD   +E ++S R       S H ++ Q
Sbjct: 128 VIRRLVDVHSSEGMTSARHRKRHPVSTHMIEQQ 160


>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
          Length = 82

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQ--LP--PGG 519
           + TC+IC E F DP+VL CFH+FCR CL+    H +   ++ C  C+ + Q  LP  PG 
Sbjct: 12  EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQSALPALPGS 71

Query: 520 VDSL 531
            D +
Sbjct: 72  ADKM 75


>SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)
          Length = 589

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVL-NCFHTFCRACLDREQTHPD--RVTCVTCRVDTQLPPGGVDSL 531
           + +C +C E F++PK L NC H  CR CL+   T  +   + C  CR ++ LP  G++ L
Sbjct: 20  ECSCPVCLEDFLEPKSLPNCAHNVCRKCLEGMATDSESKEIRCPVCRKESTLPEDGINGL 79

Query: 532 LTNLVIAAAVD 564
            TN +I   ++
Sbjct: 80  PTNCLIVKLLE 90


>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 937

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACL-DREQTHPDRV-TCVTCRVDTQLPPGGVDSLLTNL 543
           C IC + F +PK L+C H  CR CL D       RV  C  CR +  +P GGV +L TNL
Sbjct: 21  CPICLDEFKEPKTLSCMHDLCRKCLEDMAARESSRVIRCPLCRSEIDIPRGGVKNLPTNL 80

Query: 544 VIAAAVD 564
            +   V+
Sbjct: 81  RLMKLVE 87


>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
          Length = 594

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +1

Query: 352 DGLDTTCAICRETFIDPKVLNCFHTFCRACLDR--EQTHPDRVTCVTCRVDTQLPPGGVD 525
           D  D TC +C E + DP+VL C HT+CR CL+   E +    V+C  CR   ++    V+
Sbjct: 10  DVKDVTCCLCLEQYQDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCREKIEISVDEVE 69

Query: 526 SLLTNLVIAAAVD 564
            L  N ++   ++
Sbjct: 70  ELKVNFMLKDLIE 82


>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1022

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +1

Query: 358 LDTTCAICRETFIDPKVLNCFHTFCRACLDREQT-HPDRVTCVTCRVDTQLPPGGVDSLL 534
           + T C +CRET+ DP+V  C H+FC+ C+ +  T    +  C  C+ D Q+    V++L 
Sbjct: 401 MSTICGVCRETYTDPRVAPCLHSFCKECVTKLVTERQGKFVCPDCQADFQMSVKDVENLS 460

Query: 535 TNLVI 549
            N  I
Sbjct: 461 QNFSI 465


>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
          Length = 599

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDR--EQTHPDRVTCVTCRVDTQLPPGGVDSL- 531
           D TC++C E + DP+VL C HT+CR CL+   E +    V+C  CR   ++    V SL 
Sbjct: 23  DVTCSLCLEQYQDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCREKIEISVEEVKSLK 82

Query: 532 ----LTNLVIAAAVDQD 570
               L +L+   +VDQ+
Sbjct: 83  VDFMLIDLIEKMSVDQE 99


>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
          Length = 89

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQ 504
           + TC+IC E F DP+VL CFH+FCR CL+    H +   ++ C  C+ + Q
Sbjct: 12  EVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62


>SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)
          Length = 406

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = +1

Query: 355 GLDTTCAICRETFIDPKVL-NCFHTFCRACLDR--EQTHPDRVTCVTCRVDTQLPPGGVD 525
           G +  C +C E F++PK L +C H  CR CL++  ++     V C  CR  +++P  GV+
Sbjct: 17  GDEGACPVCIEVFVEPKSLPSCAHNVCRECLEKITKRNSIRFVECPICRARSEIPQNGVN 76

Query: 526 SLLTNLVIAAAVD 564
           S  TN ++   ++
Sbjct: 77  SFPTNTLLVRIIE 89


>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
          Length = 604

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
 Frame = +1

Query: 352 DGLDTTCAICRETFIDPKVLNCFHTFCRACLDR--EQTHPDRVTCVTCRVD-----TQLP 510
           D  D TC++C E + DP+VL C HT+CR CL+   E +    V+C  CR        ++ 
Sbjct: 11  DVSDVTCSLCLEQYQDPRVLACLHTYCRHCLESLVEHSQERTVSCPQCREKIVISVEEVK 70

Query: 511 PGGVDSLLTNLVIAAAVDQD 570
              VD +L +++   ++DQ+
Sbjct: 71  DLKVDFMLNDMIRKMSLDQE 90


>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
          Length = 462

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
 Frame = +1

Query: 352 DGLDTTCAICRETFIDPKVLNCFHTFCRACLDR--EQTHPDRVTCVTCRVD-----TQLP 510
           D  D TC++C E + DP+VL C HT+CR CL+   E +    V+C  CR        ++ 
Sbjct: 11  DVSDVTCSLCLEQYQDPRVLACLHTYCRHCLESLVEHSQERTVSCPQCREKIVISVEEVK 70

Query: 511 PGGVDSLLTNLVIAAAVDQD 570
              VD +L +++   ++DQ+
Sbjct: 71  DLKVDFMLNDMIKKMSLDQE 90


>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1829

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
 Frame = +1

Query: 352 DGLDTTCAICRETFIDPKVLNCFHTFCRACLDR--EQTHPDRVTCVTCRVDTQLPPGGVD 525
           D  D TC++C   + DP+VL C HT+CR CL+   E +    V+C  CR   ++    V 
Sbjct: 11  DVSDVTCSLCLGQYQDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCREKIEISVEEVK 70

Query: 526 SL-----LTNLVIAAAVDQD 570
           SL     L +L+   +VDQ+
Sbjct: 71  SLKVDFMLIDLIEKMSVDQE 90


>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
          Length = 62

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQ 504
           + TC+IC E F DP+VL C H+FCR CL+    H +   ++ C  C+ + Q
Sbjct: 12  EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62


>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
          Length = 62

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQ 504
           + TC+IC E F DP+VL C H+FCR CL+    H +   ++ C  C+ + Q
Sbjct: 12  EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62


>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 888

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPD---RVTCVTCRVDTQ 504
           + TC+IC E F DP+VL C H+FCR CL+    H +   ++ C  C+ + Q
Sbjct: 11  EVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQ 61


>SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)
          Length = 691

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
 Frame = +1

Query: 352 DGLDTTCAICRETFIDPKVLNCFHTFCRACLD---REQTHPDRVTCVTCRVDTQLPPGGV 522
           D  D TC +C + F DP++L C HT+C+ CL+    +      + C  CR + ++    V
Sbjct: 10  DEKDVTCLLCLDIFTDPRLLPCLHTYCKKCLEDLVSQCQKKGEIYCPQCRHEVKITCAQV 69

Query: 523 DSLLTNLVIAAAVDQDAELLSSGRQTSSPLG 615
            +L  N V    +   A  L+S     SP G
Sbjct: 70  SNLKINTVANDII--AALALTSEENADSPPG 98


>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 956

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
 Frame = +1

Query: 265 LERGSISPLTLSGSSPPASDSAVCDLRDFDGLDTTCAICRETFIDPKVLNCFHTFCRACL 444
           L RG+ SP +    SP    S +  LR     +  C++C +T  +PK+L CFHTFC  CL
Sbjct: 67  LIRGNPSPSSRRERSPLQMASILDSLRQ----EAECSLCHKTPSEPKILKCFHTFCNECL 122

Query: 445 DREQTH----PDRVTCVTCRVDTQLP 510
             +        +  +C +C+    LP
Sbjct: 123 TEKSAEFKGDGETFSCPSCKTRIDLP 148


>SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)
          Length = 576

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
 Frame = +1

Query: 337 DLRDFDGLDTTCAICRETFIDPKVL-NCFHTFCRACLDREQTHPDR--VTCVTCRVDTQL 507
           D     G +  C +C E F +PK L +C H  CR CL++         V C  CR  +++
Sbjct: 11  DFHTLLGDEGACPVCIEVFEEPKSLPSCAHNVCRECLEKITARNSSRFVECPICRARSEI 70

Query: 508 PPGGVDSLLTNLVIAAAVD 564
           P  GV+S  TN ++   ++
Sbjct: 71  PQNGVNSFPTNTLLVRIIE 89


>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 362

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACL----DREQTHPDRVTCVTCRVDTQLPPGGVDS 528
           +  C IC E F DP+VL C HTFC  CL     R +T   +  C  C++  Q+ P  V S
Sbjct: 13  EVECPICLERFKDPRVLPCLHTFCYECLVGLASRYKTE-GKWPCPQCKMVVQVSPAEVSS 71

Query: 529 LLTNLVI 549
           L  N ++
Sbjct: 72  LKVNFLM 78


>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
          Length = 203

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACL----DREQTHPDRVTCVTCRVDTQLPPGGVDS 528
           +  C IC E F DP+VL C HTFC  CL     R +T   +  C  C++  Q+ P  V S
Sbjct: 13  EVECPICLERFKDPRVLPCLHTFCYECLVGLASRYKTE-GKWPCPQCKMVVQVSPAEVSS 71

Query: 529 LLTNLVI 549
           L  N ++
Sbjct: 72  LKVNFLM 78


>SB_23995| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-05)
          Length = 96

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCRVDTQ---LPPGGVDSLLTN 540
           C IC E + DPK L C HT C  CL  E   P     + C +D Q   +P GG+++L ++
Sbjct: 22  CPICEEEYDDPKRLPCMHTICLGCL--ESMVPKNALIMKCPIDEQELPMPMGGINALPSD 79

Query: 541 LVIAAAVDQDAELLSSGRQT 600
           L I   ++     ++SG QT
Sbjct: 80  LRIVRLLE-----VASGGQT 94


>SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 387

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVL-NCFHTFCRACLDR--EQTHPDRVTCVTCRVDTQLPPGGVDSL 531
           + +C IC E F +PK L  C H  CR CL    E+   +R  C  CR    +P  G+D  
Sbjct: 22  EISCPICYEDFEEPKCLPKCAHNICRECLLGIIEKAQLERFECPICRAIVAVPKDGIDGF 81

Query: 532 LTNLVIAAAVD 564
            TN ++   V+
Sbjct: 82  PTNSLLVRLVE 92


>SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 632

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +1

Query: 367 TCAICRETFIDPKVLNCFHTFCRACLD---REQTHPDRVTCVTCRVDTQLPPGGVDSLL 534
           TC  C   F +P++  C H+FC  CL+   R + +   + C TC+ + + P GG+ + L
Sbjct: 15  TCRQCSNVFKNPRITPCLHSFCAECLNEIARSRPYQAYIACPTCKYEIRKPEGGLFNTL 73


>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
          Length = 784

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLD--REQTHPDRVTCVTCRVDTQLP--PGGVDSLLT 537
           C +C + F  PK+L+C H+FC++C++    +T  D +  + C V   L   P  V+SL T
Sbjct: 62  CRVCNQRFNKPKLLHCLHSFCQSCIEGLARKTEDDCLELI-CPVCDSLGAIPRSVESLPT 120

Query: 538 NLVIAAAVDQDAELLS 585
           N  +   V + A   S
Sbjct: 121 NFALWDTVRKHANTTS 136


>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
          Length = 553

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 25/66 (37%), Positives = 33/66 (50%)
 Frame = +1

Query: 367 TCAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCRVDTQLPPGGVDSLLTNLV 546
           +C +C+E FI    L C H+FC  CL  +     R TC  CR   Q  P  V S++ +  
Sbjct: 370 SCIVCQELFIRATTLTCSHSFCEYCL--QSWLRKRNTCPICRCAVQSQP--VRSIVLDNA 425

Query: 547 IAAAVD 564
           IA  VD
Sbjct: 426 IAKMVD 431


>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
          Length = 843

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
 Frame = +1

Query: 361 DTTCAICRETFID------PKVLNCFHTFCRACLDR-EQTHPDRVTCVTCRVDTQLPPGG 519
           D TC +C   +        P++L+C HTFC  C+ + ++   D V C TC++ T L    
Sbjct: 327 DLTCPLCYTAYGTGYPQRIPRILDCSHTFCTECIMKIKELQGDVVECPTCKLRTLL-TSS 385

Query: 520 VDSLLTNLVIAAAV 561
           VD L  N+ I  AV
Sbjct: 386 VDCLKKNMDILTAV 399


>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 514

 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDREQTHPD-RVTCVTCRVDTQLPPGGVDSLLTNLV 546
           C++C      PK+L C H+FC ACL+   T  D    C  C  + ++    +  L TN  
Sbjct: 20  CSLCHRLIRGPKLLPCLHSFCLACLEDLVTENDVGFNCPQCHTEAKVSKAALRGLPTNFF 79

Query: 547 IAAAVD 564
           +   +D
Sbjct: 80  LDNMLD 85


>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
          Length = 795

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 24/59 (40%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDREQTHPD-----RVTCVTCRVDTQLPPGGVDSL 531
           C  C   + +PKVL C HTFC  CL  E+ H D      VTC  C  D  L  G  + L
Sbjct: 15  CPKCMNAYENPKVLPCLHTFCSQCLS-EELHRDCEGRLNVTCPKCLRDFPLRDGAENPL 72


>SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12)
          Length = 549

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACL-DREQTHPDRVTCVTCRVDTQ 504
           C  C   F DP++L C H+ C+ CL D EQ     + C  C  D +
Sbjct: 21  CRYCNGIFEDPRLLPCLHSLCKKCLKDIEQAQEGAIACPVCLTDVE 66


>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 649

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLD---REQTHPDRVTCVTCRVDTQLPPGGVDSLLTN 540
           C +C   + +P +L C+H+FC  C+     +      V C  CR + ++P   V  L +N
Sbjct: 20  CPVCLGEYKNPMLLRCYHSFCLRCVQELLHQSGEKGVVKCPQCRTEMEIPNSDVKRLKSN 79

Query: 541 LVIAAAVD 564
             I   +D
Sbjct: 80  FYINNLLD 87


>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
          Length = 321

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = +1

Query: 352 DGLDTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCRVDT 501
           D L   C +CR+TF +P V  C H FC AC    Q +     C  C V T
Sbjct: 239 DNLPFACIMCRKTFKNPVVTKCLHYFCEAC--ALQHYKKNSKCFVCGVQT 286


>SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)
          Length = 337

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 20/58 (34%), Positives = 29/58 (50%)
 Frame = +1

Query: 322 DSAVCDLRDFDGLDTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCRV 495
           DS   D +D +  D TC IC +  ++P VL C H FC+ C   +      + C  CR+
Sbjct: 23  DSTQQDEKDIE--DFTCPICLQLLVEPVVLPCEHEFCKMCF-TQNVQEANLQCPMCRI 77


>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 728

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDRE 453
           C++C E   +PK+L CFH +C+ CL  E
Sbjct: 14  CSLCSEVLTEPKILRCFHVYCQKCLQAE 41


>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
          Length = 858

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +1

Query: 274 GSISPLTLSGSSPPASDSAVCDLRDFDGLDTTCAICRETFIDPKVLN-CFHTFCRACLDR 450
           GS +PLT   SS   S   V    D  G    C IC ET   P+ L  C HTFCR C+  
Sbjct: 649 GSAAPLT---SSLGDSTLDVDMTEDGAGDSAECPICLETITYPETLQGCGHTFCRPCI-T 704

Query: 451 EQTHPDRVTCVTCR 492
           E +   ++ C TCR
Sbjct: 705 EASKSSKL-CPTCR 717


>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
          Length = 654

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCR 492
           C +C   F +P    C H FCRACL+R   H  R  C  CR
Sbjct: 379 CTLCCRLFYNPVTTPCGHVFCRACLNRSLDH--RPGCPICR 417



 Score = 31.1 bits (67), Expect = 0.85
 Identities = 15/44 (34%), Positives = 18/44 (40%)
 Frame = +1

Query: 367 TCAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCRVD 498
           +C  C    + P  L C HT C  CL + Q       CV C  D
Sbjct: 100 SCVRCCGILLGPCTLPCGHTVCEKCLSKSQAK----KCVDCGED 139


>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
          Length = 911

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +1

Query: 274 GSISPLTLSGSSPPASDSAVCDLRDFDGLDTTCAICRETFIDPKVLN-CFHTFCRACLDR 450
           GS +PLT   SS   S   V    D  G    C IC ET   P+ L  C HTFCR C+  
Sbjct: 724 GSAAPLT---SSLGDSTLDVDMTEDGAGDSAECPICLETITYPETLQGCGHTFCRPCI-T 779

Query: 451 EQTHPDRVTCVTCR 492
           E +   ++ C TCR
Sbjct: 780 EASKSSKL-CPTCR 792


>SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019)
          Length = 413

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 370 CAICRETFIDPKVLN-CFHTFCRACLDREQTHPDRVTCVTCRVDTQLPPGGVDSLLTNLV 546
           C IC E F  PK L  C H  C +CL + +     + C  CR  T++     +SL TN +
Sbjct: 22  CPICTEIFETPKCLPVCAHNVCLSCLKKMKIEQGFIKCPICRKKTKI-TNPAESLPTNSL 80

Query: 547 IAAAVD 564
           +   V+
Sbjct: 81  LVRLVE 86


>SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 254

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +1

Query: 277 SISPLTLSGSSPPASDSAVCDLRDFDGLDTTCAICRETFIDPKVLNCFHTFCRACLDR-E 453
           S+   + S S P AS +   D    +  +  C IC +T  D  +  C H FC  CL R  
Sbjct: 33  SVGAASSSSSEPTASHNPSEDPNSANA-NFECNICLDTARDAVISMCGHLFCWPCLHRWL 91

Query: 454 QTHPDRVTCVTCR 492
           +T P+R  C  C+
Sbjct: 92  ETRPNRSMCPVCK 104


>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
          Length = 877

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDREQTHPD--RVTCVTCRVDTQLPPGGVDSLLTNL 543
           C IC     D +VL C HT+CR C++    H    R  C +C  +  L        L   
Sbjct: 145 CGICHALLRDARVLPCLHTYCRRCIEDIILHRQSVRAHCPSCNREIPLDSYCTAKELPRD 204

Query: 544 VIAAAVDQDAELLSSG 591
            +A A+  +  L   G
Sbjct: 205 AVAIALQDELALRDGG 220


>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 645

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACL 444
           C +CR  F DP + +C HTFC+AC+
Sbjct: 194 CPLCRRVFKDPVITSCGHTFCQACI 218


>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
          Length = 471

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCRVDTQLPPGGVDSLLTNLV 546
           C +C + ++DP  + C HT+C AC+  E T  +   C  C          V+ LL N++
Sbjct: 22  CGLCGDFYVDPVTILCGHTYCLACIKDEFTGKN---CKKCGFKITEESNSVNILLCNII 77



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCR 492
           D  C +C    ++P    C H+FCR CL R   H  RV C  CR
Sbjct: 327 DFECKLCFNLLLEPVTSLCGHSFCRDCLYRSLDH--RVECPCCR 368


>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
          Length = 1387

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
 Frame = +1

Query: 211  ASRTPSLESLPGANSIGSLERGSISPLTLSGSSPPASDSAVCDLRDFDGLDTTCAICRET 390
            A+  P + +   A+++ +L+RGS   +    +    S  A   +R      + C IC   
Sbjct: 608  AAIDPPVAAHDSASTL-ALDRGSHDGVNNMAAPEERSKEAEGIIRSAHE-SSCCPICSRP 665

Query: 391  FIDPKVLNCFHTFCRACLD---REQTHPDRVTCVTCRVDTQLP-PGGVDSLLTNLVIAAA 558
            F  PK+L C HT+C  C+    R +     + C  C     +P P   D+L  +L     
Sbjct: 666  FKSPKILPCLHTYCSDCVKEIVRSRLGKLTLQCPKCPRSVDIPDPFTPDTLPFSLYHRRL 725

Query: 559  VDQDAELLSSGRQTSSPLGS 618
            +  D  LL + + +S+  GS
Sbjct: 726  L--DLRLLENPQDSSASCGS 743


>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 767

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +1

Query: 367 TCAICRETFIDPKVLNCFHTFCRACLDREQTHP---DRVTCVTCRVDTQL 507
           TC+ C+  + +PK L C H FC  CL + Q      +R+ C TC  +  L
Sbjct: 17  TCSACKGFYKNPKRLPCLHAFCCHCLKKTQRGTKLCERMRCPTCDYELDL 66


>SB_15354| Best HMM Match : NHL (HMM E-Value=4.4e-14)
          Length = 1071

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 367 TCAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCRV 495
           TC  C+ET  DP +L C  + CR+C  +       +  V CR+
Sbjct: 118 TCPSCKETMNDPVLLPCLDSICRSCCQKSAQKHGNMWNVLCRL 160


>SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012)
          Length = 450

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
 Frame = +1

Query: 367 TCAICRETFID----PKVLNCFHTFCRACLDREQTHPDRVTCVTCRVDTQLPPGGVDSLL 534
           TC IC   F D    P  L C HT C+ACL   Q H  +       V+T +    V++ L
Sbjct: 13  TCPICYHEFEDRQRGPISLACGHTICKACL--SQLHKTQCPFDQATVNTDIDKLPVNTAL 70

Query: 535 TNLVIAAAVDQDAEL--LSSGRQTSS 606
             LV+  A   D  L  + + R+ SS
Sbjct: 71  LQLVVLGASVMDYPLPDIPNVRENSS 96


>SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)
          Length = 474

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 355 GLDTTCAICRETFIDPKVLNCFHTFCRACLDRE 453
           G+   C  C     DP++L C H+ C+ CL+++
Sbjct: 14  GVSLYCPACSNVIKDPRILPCLHSICKTCLEKQ 46


>SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25)
          Length = 662

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 14/99 (14%)
 Frame = +1

Query: 346 DFDGLDTTCAICRETFI--DPKVLNCFHTFCRACL----DREQTHPDRVTCVTCRVDT-- 501
           D D +   C ICR++    +PK+L C H+FC  CL    D++Q    +    T       
Sbjct: 14  DEDSVFMICGICRKSSATSNPKLLPCLHSFCFGCLEEKFDQQQQQEQKQNSTTSSSSASS 73

Query: 502 ------QLPPGGVDSLLTNLVIAAAVDQDAELLSSGRQT 600
                 + P  G + L+    IA  +D    L S GRQT
Sbjct: 74  SPLQRLKCPTCGQEFLVPPKGIAGFLDNQFMLESLGRQT 112


>SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 609

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 4/32 (12%)
 Frame = +1

Query: 361 DTTCAICRETFID----PKVLNCFHTFCRACL 444
           + TC +C+E F +    PK+L+C HT C+AC+
Sbjct: 217 ECTCGVCQEEFNEKTRVPKLLHCSHTLCKACV 248


>SB_31924| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00073)
          Length = 498

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 4/32 (12%)
 Frame = +1

Query: 361 DTTCAICRETFID----PKVLNCFHTFCRACL 444
           + TC +C+E F +    PK+L+C HT C+AC+
Sbjct: 320 ECTCGVCQEEFNEKTRVPKLLHCSHTLCKACV 351


>SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12)
          Length = 379

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 367 TCAICRETFIDPKVLNCFHTFCRACLDR-EQTHPDRVTCVTCRV 495
           TC  C+ET   P +L C  + CR+C  +  Q H D  T V CR+
Sbjct: 26  TCPSCKETMNGPVLLPCLDSICRSCCQKTAQKHGDTWT-VPCRL 68


>SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17)
          Length = 605

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 367 TCAICRETFIDPKVLNCFHTFCRACLDR-EQTHPDRVTCVTCRV 495
           TC  C+ET   P +L C  + CR+C  +  Q H D  T V CR+
Sbjct: 26  TCPSCKETMNGPVLLPCLDSICRSCCQKTAQKHGDTWT-VPCRL 68


>SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10)
          Length = 169

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 367 TCAICRETFIDPKVLN-CFHTFCRACLDREQTHPDRVTCVTC 489
           TC +C    I P  +  C HTFC++C+       +  TC +C
Sbjct: 63  TCGLCEGYLIKPTTITECLHTFCKSCIVTYLQDSEDNTCPSC 104


>SB_14207| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0048)
          Length = 233

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCRVD 498
           C  C++  + P    C H  C+ CL R     +  TC  CR D
Sbjct: 105 CVCCQDLVLYPVTTKCLHNICKGCLQR-SFKAEVFTCPYCRTD 146


>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1555

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVT 477
           D+ CAIC     DP + +C H++C+ C+ + +   +  T
Sbjct: 27  DSMCAICHIVVKDPILTSCGHSYCKCCIQKWRNRMEEFT 65


>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
          Length = 380

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +1

Query: 355 GLDTTCAICRETFIDPKVLNCFHTFCRACL-DREQTHPDRVTCVTCR 492
           G+   C IC +   DP +  C H FC  CL D  +       C  CR
Sbjct: 60  GVSEECPICLDPLDDPSITRCAHVFCTGCLTDVIENEGLAPRCPMCR 106


>SB_58465| Best HMM Match : zf-B_box (HMM E-Value=0.00022)
          Length = 476

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
 Frame = +1

Query: 400 PKVLNCFHTFCRACLDR--EQTHPDRVTCVTCRVDTQLPP--GGVDSLLTNLVIAAAVD- 564
           P+ LNC HT+C  CL +   Q+    V C  C+ +T L     G+ SL  N  +   ++ 
Sbjct: 157 PRNLNCGHTYCTGCLGKLSAQSQYAFVRCPACKHETLLLSRFNGIPSLPKNFGLLEIIES 216

Query: 565 -QDAELLSSGRQTSSPLGSLHR 627
            ++A+   +   T     + HR
Sbjct: 217 KENADKAPASASTIDQERAKHR 238


>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
          Length = 856

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 400 PKVLNCFHTFCRACLDR-EQTHPDRVTCVTCRVDTQLPPGGVDSLL 534
           P +L C HT+C +C+ +  +    +V C  C+  TQL   G+  +L
Sbjct: 405 PLLLECGHTYCDSCIIKLSRLQKTQVACPECQHVTQLKAEGIAGVL 450


>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
          Length = 346

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCR 492
           C IC     +     C H+FC +CL+   + P+  +C +CR
Sbjct: 18  CNICVGVLENAITTICGHSFCESCLETWLSRPEVQSCPSCR 58


>SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09)
          Length = 310

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDREQTH 462
           C ICR+   +P +  C H++C AC+    TH
Sbjct: 18  CCICRDVLEEPLMAPCEHSYCSACVLGWLTH 48


>SB_12693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0014)
          Length = 413

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTF 429
           + TC++C E F DP+VL+C  +F
Sbjct: 73  EVTCSLCIEHFTDPRVLHCLRSF 95


>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 466

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDR--EQTHPDRVTCVTCRVDTQLPPG 516
           CAIC+E    P    C H FC  C+    +QT+ ++  C  C+    + PG
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTY-NKSGCPVCK--ASISPG 207


>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
          Length = 262

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDR--EQTHPDRVTCVTCRVDTQLPPG 516
           CAIC+E    P    C H FC  C+    +QT+ ++  C  C+    + PG
Sbjct: 34  CAICKEVLTQPIATPCDHYFCVLCICEWLDQTY-NKSGCPVCK--ASISPG 81


>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
          Length = 301

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDR--EQTHPDRVTCVTCRVDTQLPPG 516
           CAIC+E    P    C H FC  C+    +QT+ ++  C  C+    + PG
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTY-NKSGCPVCK--ASISPG 207


>SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1668

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 22/62 (35%), Positives = 31/62 (50%)
 Frame = +2

Query: 215 HAPRPLSRCPVPTQ*VRWSVAPYRPSLSAVHHPLRATPPYVIYATSTDSIPLAPSAVRHS 394
           HA +P+  C VPT  V  S++  R   S    P  +       + S+ S P++PSAV H 
Sbjct: 475 HAYQPVRTCAVPTSYVSTSLSASRIHTST-SSPQMSFSSRDSLSVSSLSPPISPSAVDHQ 533

Query: 395 ST 400
           ST
Sbjct: 534 ST 535


>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 337

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +1

Query: 361 DTTCAICRETFIDPKVLNCFHTFCRACL 444
           D  C IC     DP V  C H FC  CL
Sbjct: 54  DFKCGICFGVLEDPLVTTCGHVFCSQCL 81


>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
          Length = 301

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDR--EQTHPDRVTCVTCR 492
           CAIC+E    P    C H FC  C+    +QT+ ++  C  C+
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTY-NKSGCPVCK 201


>SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 332

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 9/46 (19%)
 Frame = +1

Query: 361 DTTCAICRETFIDP-KVLNCFHTFCRACLD--------REQTHPDR 471
           D  C IC+  F DP +  +C H FC +CL+        R++ +PD+
Sbjct: 39  DYQCPICQLPFRDPVQTRDCGHRFCESCLEPILRRCISRDKVYPDK 84


>SB_18583| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 965

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 472 VTCVTCRVDTQLPPGGVDSLLTNLVIAAAVD 564
           +TC TCR +T +P  GV+SL  N  +   +D
Sbjct: 165 LTCPTCRKETPIPETGVESLHLNFFVNQMLD 195


>SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 598

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 370 CAICRETFIDP-KVLNCFHTFCRACL 444
           C IC+  F DP ++  C H FC++CL
Sbjct: 26  CPICQLAFRDPIQIEECGHRFCQSCL 51


>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1094

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDR 450
           C+ CR+ ++ P V  C H  C  C ++
Sbjct: 18  CSYCRKVYLHPLVTGCGHVLCTKCYNK 44


>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
          Length = 398

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +1

Query: 367 TCAICRETFIDP---KVLNCFHTFCRACLDREQTHPDRVTCVTCRVDT 501
           +C IC E F      ++L C H +C  CL R     +  TC  CR  T
Sbjct: 261 SCPICLEEFTPETPTRLLVCGHKYCEPCLSR--WLENNTTCPICRKPT 306


>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
          Length = 306

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDR------EQTHPDRVTCVTCRVD 498
           C IC E      +  C H+FC  CL+       E+      +C +CR D
Sbjct: 18  CGICAEVLERAVLTPCGHSFCGVCLETWMNAKLEENEKCPASCPSCRAD 66


>SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 730

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = +1

Query: 376 ICRETFIDPKVLNCFHTFCRACLDR-EQTHPDR---VTCVTCRVDTQLPPGGV 522
           ICRE    PK L C H +C  C+D   +T  D+    TC  CR  +   PG V
Sbjct: 281 ICRER---PKTLPCLHHYCAKCIDPWIKTCSDQGINSTCPECR--SPFKPGDV 328


>SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
          Length = 291

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 370 CAICRETFIDPK-VLNCFHTFCRACLDR 450
           C +C    +D   ++ C H+FCR C+ R
Sbjct: 48  CVLCGGYLVDATTIIECLHSFCRCCIVR 75


>SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 486

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = +1

Query: 358 LDTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCR--VDT 501
           +D  C IC    I  + L C H  CR+C+ R     +   C  C+  VDT
Sbjct: 426 VDELCPICCAMRISVRFLPCRHVSCRSCITRHLM--NNKECFFCKEVVDT 473


>SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
          Length = 510

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 370 CAICRETFIDPK-VLNCFHTFCRACLDR 450
           C +C    +D   ++ C H+FCR C+ R
Sbjct: 16  CVLCGGYLVDATTIIECLHSFCRCCIVR 43


>SB_59800| Best HMM Match : SPRY (HMM E-Value=7.8e-05)
          Length = 1444

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +1

Query: 448 REQTHPDRVTCVTCRVDTQLPPGGVDSLLTNLVIAAAVDQ-DAELLSSGRQTSSP 609
           +    PD V C +CR    + P GVD+L  NL++   +++   E    GR  + P
Sbjct: 186 KSHLEPD-VKCPSCRRKIPVDPRGVDALPRNLILENVIERFKEERAVPGRGNTKP 239


>SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 305

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 367 TCAICRETFIDP-KVLNCFHTFCRACLDREQ 456
           +C +CR   +DP    +C H  CR CL +++
Sbjct: 40  SCRVCRGLVVDPFGSQSCLHYVCRGCLRKKR 70


>SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035)
          Length = 351

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 367 TCAICRETFIDP-KVLNCFHTFCRACLDREQ 456
           +C +CR   +DP    +C H  CR CL +++
Sbjct: 40  SCRVCRGLVVDPFGSQSCLHYVCRGCLRKKR 70


>SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 496

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 220 TPSLESLPGANSIGSLERGSISP--LTLSGSSPPASDSAVCDLRDFDGLDTT 369
           +P  E  PGAN   S +R   SP  LT +     + + AV    + +G D+T
Sbjct: 230 SPCSEPTPGANEFLSTQRNQTSPVQLTRNSDDEKSDEEAVDSNNELEGKDST 281


>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1716

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 370  CAICRETFIDPK-VLNCFHTFCRACL 444
            C +C    +D   ++ C H+FCR+C+
Sbjct: 1366 CVLCGGYLVDATTIVECLHSFCRSCI 1391


>SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06)
          Length = 2009

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
 Frame = +2

Query: 176  SVCFGMPVS*RWPHAPRPLSRCPVPTQ*VRWSVAPYRPSLSAVHH--PLRATPPY----V 337
            + C   P+  R  H P  LSR       +   V P R     +HH  P  A+ PY    +
Sbjct: 755  TACHIFPIRLRALHLPHTLSRAASTPYAIACRVYPIRHCAPHLHHTPPRAASTPYATVRL 814

Query: 338  IYATSTDSIPLAPSAVRHSSTPKYLTA 418
            IY     ++ L  +  R +S+P Y TA
Sbjct: 815  IYFIRHHALHLPHTPSRATSSP-YATA 840


>SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
          Length = 158

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 367 TCAICRETFIDPKVLNCFHTFCRACL 444
           TC  C     D  +  CFH FC  CL
Sbjct: 105 TCPCCNTRKKDAILTKCFHVFCYECL 130


>SB_49784| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 85

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = -1

Query: 452 SLSRQARQKV*KQLSTLGSMNVSRQMAQVVSS 357
           S SRQ RQ   KQ STLGS+  S  +  V SS
Sbjct: 5   SSSRQCRQNEWKQGSTLGSLKCSIHIEHVTSS 36


>SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
          Length = 406

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 367 TCAICRETFIDPKVLNCFHTFCRACL 444
           TC  C     D  +  CFH FC  CL
Sbjct: 353 TCPCCNTRKKDAILTKCFHVFCYECL 378


>SB_38758| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 324

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +1

Query: 220 TPSLESLPGANSIGSLERGSISPLTLSGSSPPASDSAVCDLRDFDGLDTTCAIC 381
           TP+ +S+      G  E+  +  L +SG++P A+  A C  R++ G+   C IC
Sbjct: 229 TPNPQSVRNLKERGFEEKEIMVALKVSGNNPEAASFAFC-FRNYQGI---CCIC 278


>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
          Length = 695

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDREQ 456
           C IC E   D ++  C H  C  CL++ Q
Sbjct: 185 CKICAENNKDVRIEPCGHLMCHLCLEQWQ 213


>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 867

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDREQ 456
           C IC E   D ++  C H  C  CL++ Q
Sbjct: 381 CKICAENNKDVRIEPCGHLMCHLCLEQWQ 409


>SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)
          Length = 562

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +1

Query: 370 CAICRETFIDPKVLNCFHTFCRACLDREQTH 462
           C IC+    +P    C H  C +C +    H
Sbjct: 34  CTICKHVLQEPLQTTCGHRICESCFELSLRH 64


>SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 585

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +1

Query: 364 TTCAICRETFIDPKVLNCFHT-FCRACLDREQTHPDRVTCVTCRVD 498
           T C IC E   +  +LNC H   CR C   +Q H     C  CR D
Sbjct: 536 TQCVICLENQRNVVLLNCGHVCSCRTC--AQQIH----QCPVCRGD 575


>SB_698| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00037)
          Length = 303

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = +1

Query: 352 DGLDTTCAICRETFI---DPKVLNCFHTFCRACL 444
           +G+D  C IC E +      K L C H F  AC+
Sbjct: 251 EGIDDVCLICMEEYAVGDSMKYLPCRHNFHSACI 284


>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
          Length = 665

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 227 PLSRCPVPTQ*VRWS-VAPYRPSLSAVHHPLRATPPYVIYATSTDSIP 367
           PLS  P+P +   ++ V  Y P  S++HH     P  +IY   + SIP
Sbjct: 282 PLSS-PIPHRHHLYTTVIIYTPPSSSIHHCHHLYPTVIIYTPPSSSIP 328


>SB_43998| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 170

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
 Frame = +2

Query: 296 SAVHHPLRATPPYVIYATST---DSIPLAPSAVRHS-------STPKYLTAFILFAGLAW 445
           S  HHP ++TP  +IY  +T         PS   H+       STP Y+T + + +   +
Sbjct: 13  SYAHHPQQSTPSTIIYTVNTYPHHQQLSTPSIAIHTYLHHPQLSTP-YITIYTIHSYPHY 71

Query: 446 TENRPTRTE*RALLVVLTLN 505
           T+     TE   +LVV  ++
Sbjct: 72  TQQSKALTELIGMLVVFFIS 91


>SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 690

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +1

Query: 337 DLRDFDGLDTTCAICRETFIDPKV---LNCFHTFCRAC 441
           D RD+  +   C IC   F + K+   ++C H+FC  C
Sbjct: 301 DTRDWFMVSKECGICFGDFRENKMTALMSCGHSFCTEC 338


>SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 362

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 15/69 (21%)
 Frame = +1

Query: 361 DTTCAICRETFID-PK--------VLNCFHTFCRACLD--REQTHPDRV---TCVTCRVD 498
           + TCA+C +  +  PK        + NC H FC  C+   R+ +H ++     C  CR  
Sbjct: 171 NVTCAVCLDVVMSKPKQSERRFGILPNCIHAFCLECIRKWRKASHAEKKVVRACPICRTP 230

Query: 499 T-QLPPGGV 522
           +  + P GV
Sbjct: 231 SGYVVPSGV 239


>SB_47760| Best HMM Match : DUF1168 (HMM E-Value=2.1)
          Length = 438

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 226 SLESLPGANSIGSLERGSISPLTLSGSSPPASD 324
           S + LP   +I S + G ++PL  S  SPP+S+
Sbjct: 313 SEDDLPTIPNIPSTDEGQVNPLYESEPSPPSSE 345


>SB_4531| Best HMM Match : zf-C3HC4 (HMM E-Value=0.098)
          Length = 533

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 331 VCDLRDFDGLDTTCAICRETFIDPKVLNCFHTFCRACLD 447
           +CD ++   L TT   C         LNCFHTF   CL+
Sbjct: 437 ICDYKNCTQLSTTNVNC---------LNCFHTFHNFCLE 466


>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
          Length = 2478

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
 Frame = -1

Query: 410  STLGSMNVSRQMAQVVSSPSKSRKSHTAESLAGGDEPLRVRGDMEPRS-SEPIELAPGSD 234
            S +   N  R  ++     SK    +  +++AG D  +   G+ +PRS SE +     S 
Sbjct: 2387 SKMDLFNSGRHFSRSGEIASKEEAYYHNKNMAGMDNDVFYSGETKPRSKSEAVYTNGTSS 2446

Query: 233  SRDGVREAIFRKPASQSKP 177
            SR   ++    + +SQ  P
Sbjct: 2447 SRSSDKDRKGSRSSSQRNP 2465


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,325,155
Number of Sequences: 59808
Number of extensions: 457729
Number of successful extensions: 1714
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 1449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1690
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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