Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0616
(674 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 44 6e-06
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 44 6e-06
AY045760-2|AAK84943.1| 169|Anopheles gambiae D7-related 3 prote... 26 1.3
AJ133854-1|CAB39729.1| 169|Anopheles gambiae D7-related 3 prote... 26 1.3
AJ000035-1|CAA03871.1| 156|Anopheles gambiae D7r3 protein protein. 25 2.2
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 24 3.8
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 24 5.0
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 24 5.0
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 23 6.7
AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsiv... 23 8.8
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 43.6 bits (98), Expect = 6e-06
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +1
Query: 346 DFDGLDTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCRVDT 501
D + L C +CRE+F+DP V C H FC C + R C C V T
Sbjct: 239 DDEELPFKCYVCRESFVDPIVTKCKHYFCERCALAQYKKSSR--CAICGVQT 288
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 43.6 bits (98), Expect = 6e-06
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +1
Query: 346 DFDGLDTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCRVDT 501
D + L C +CRE+F+DP V C H FC C + R C C V T
Sbjct: 239 DDEELPFKCYVCRESFVDPIVTKCKHYFCERCALAQYKKSSR--CAICGVQT 288
>AY045760-2|AAK84943.1| 169|Anopheles gambiae D7-related 3 protein
protein.
Length = 169
Score = 25.8 bits (54), Expect = 1.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 567 LVDSSGDH*IRKKAVNTTGWQLSVNTTSNARYSVRVGLFSVQA 439
+VD GDH K N ++ ++ +N Y+ +G S QA
Sbjct: 87 MVDPDGDHAGSMKKCNAEAEKVDTSSKANTFYTCFLGTSSAQA 129
>AJ133854-1|CAB39729.1| 169|Anopheles gambiae D7-related 3 protein
protein.
Length = 169
Score = 25.8 bits (54), Expect = 1.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 567 LVDSSGDH*IRKKAVNTTGWQLSVNTTSNARYSVRVGLFSVQA 439
+VD GDH K N ++ ++ +N Y+ +G S QA
Sbjct: 87 MVDPDGDHAGSMKKCNAEAEKVDTSSKANTFYTCFLGTSSAQA 129
>AJ000035-1|CAA03871.1| 156|Anopheles gambiae D7r3 protein protein.
Length = 156
Score = 25.0 bits (52), Expect = 2.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 567 LVDSSGDH*IRKKAVNTTGWQLSVNTTSNARYSVRVGLFSVQA 439
+VD GDH K N ++ ++ +N Y+ +G S QA
Sbjct: 87 MVDPDGDHAGSMKKCNGEAEKVDTSSKANTFYTCFLGTSSAQA 129
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 24.2 bits (50), Expect = 3.8
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 233 SRCPVPTQ*VRWSVAPYRPSLSAVHHPLRATPPYVIYATSTDSIPLAP 376
S P +Q V V P +PS + P + TPP AT D P P
Sbjct: 370 SHIPAGSQPVPAVVNPQQPSRPTIPAPQQQTPPRQPPATG-DRAPAHP 416
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 23.8 bits (49), Expect = 5.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 153 ICFLRLLIKDLNYGTHTRTVISKKELTYSKFVRIV 49
+C L + IKD G H + +++ TY+ R V
Sbjct: 8 LCLLVIYIKDSLQGPHEKRLLNNLLATYNTLERPV 42
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 23.8 bits (49), Expect = 5.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 153 ICFLRLLIKDLNYGTHTRTVISKKELTYSKFVRIV 49
+C L + IKD G H + +++ TY+ R V
Sbjct: 8 LCLLVIYIKDSLQGPHEKRLLNNLLATYNTLERPV 42
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 23.4 bits (48), Expect = 6.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 346 DFDGLDTTCAICRETFIDPK 405
DF+ TTC + E ++ PK
Sbjct: 82 DFEANGTTCELEEEVYLQPK 101
>AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsive
protein 2 protein.
Length = 439
Score = 23.0 bits (47), Expect = 8.8
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -1
Query: 323 SLAGGDEPLRVRGDMEPRSSEPIELAPGSDSRDGV 219
+L G D PLR GD R P S+ GV
Sbjct: 351 ALKGADAPLRKVGDPTKRFGSYAFRLPDSNGEHGV 385
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,128
Number of Sequences: 2352
Number of extensions: 15016
Number of successful extensions: 54
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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