Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0615
         (696 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0RNG7 Cluster: Putative uncharacterized protein; n=1; ...    35   2.2  
UniRef50_A5CEM8 Cluster: SpoT-like ppGpp synthetase; n=1; Orient...    34   3.8  
UniRef50_Q50FS8 Cluster: Cj81-102; n=5; Campylobacter jejuni|Rep...    33   6.7  
UniRef50_Q6YWH6 Cluster: ATP synthase subunit-like protein; n=9;...    33   6.7  
UniRef50_Q8IAR8 Cluster: Putative uncharacterized protein MAL8P1...    33   6.7  
UniRef50_Q7REN0 Cluster: Putative uncharacterized protein PY0503...    33   6.7  
UniRef50_Q8M9V8 Cluster: Cell division protein; n=1; Chaetosphae...    33   8.8  
UniRef50_Q7RQJ8 Cluster: Putative uncharacterized protein PY0109...    33   8.8  
UniRef50_Q7RQ69 Cluster: Putative uncharacterized protein PY0123...    33   8.8  

>UniRef50_A0RNG7 Cluster: Putative uncharacterized protein; n=1;
           Campylobacter fetus subsp. fetus 82-40|Rep: Putative
           uncharacterized protein - Campylobacter fetus subsp.
           fetus (strain 82-40)
          Length = 393

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -3

Query: 481 LLYNTLCIFF-FFYFEEPRNASVVTNKIVLIKNNHNYLKYVN*NAK 347
           L++N L IFF FF FE      ++ + I+++ N  N+L+Y+N   K
Sbjct: 347 LIFNMLAIFFIFFKFEYLAQVFMLVSVILVLVNMINFLRYINFGVK 392


>UniRef50_A5CEM8 Cluster: SpoT-like ppGpp synthetase; n=1; Orientia
            tsutsugamushi Boryong|Rep: SpoT-like ppGpp synthetase -
            Orientia tsutsugamushi (strain Boryong) (Rickettsia
            tsutsugamushi)
          Length = 1388

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -3

Query: 202  NSNFYCTQFTTIFATLQTVRLITTVTFL-QPHSNDTKHMFCFKLAT 68
            N+N YCT  T I   L+TV+ +  +TF+ +   N  KH  C+ + T
Sbjct: 900  NNNNYCTIGTVILEYLKTVKKLWPITFICKQLENAGKHESCYMILT 945


>UniRef50_Q50FS8 Cluster: Cj81-102; n=5; Campylobacter jejuni|Rep:
           Cj81-102 - Campylobacter jejuni
          Length = 192

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 194 FLLHSIYYNFRYITNSKVDHDGNFFATSF**HKAYVLLQISY 69
           +++ S  Y +R   NS  +HDGNF  TSF  +  Y+L   ++
Sbjct: 49  YIIKSKKYKYRLRQNSSSNHDGNFNKTSFPLYLDYILKDFNH 90


>UniRef50_Q6YWH6 Cluster: ATP synthase subunit-like protein; n=9;
           Oryza sativa|Rep: ATP synthase subunit-like protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 364

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 580 LLKSRHVKLRIAPYQCLCEFMTRINTVYRISLYLLYNTLC 461
           LLK++  K+ +A YQC+   MT++   Y +  + LY T C
Sbjct: 88  LLKAKFPKISMADYQCV---MTQVERQYNVRRHKLYKTYC 124


>UniRef50_Q8IAR8 Cluster: Putative uncharacterized protein MAL8P1.124;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL8P1.124 - Plasmodium
            falciparum (isolate 3D7)
          Length = 1346

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 20/89 (22%), Positives = 44/89 (49%)
 Frame = -3

Query: 565  HVKLRIAPYQCLCEFMTRINTVYRISLYLLYNTLCIFFFFYFEEPRNASVVTNKIVLIKN 386
            ++ L +  Y  +C   +  N++   + Y+ Y  L I +F+Y++  +N    ++K     N
Sbjct: 1239 NILLYLNKYDIIC---SNYNSIKYFTKYIHYKNLTINYFYYYDNDQNILDESHK--QHNN 1293

Query: 385  NHNYLKYVN*NAKH*NISNVLPF*EKQLH 299
              N++ + N N ++ N +  + F +K  H
Sbjct: 1294 KLNFINFKNNNEQNENANFYISFSDKGGH 1322


>UniRef50_Q7REN0 Cluster: Putative uncharacterized protein PY05034;
           n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05034 - Plasmodium yoelii yoelii
          Length = 1661

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
 Frame = -3

Query: 538 QCLCEFMTRINTVYRISLYLLYNTL-CIFFFFYFEEPRNAS--VVTNKIVLIKNNHNYLK 368
           +CL      IN VY++SLY+LY ++  I  + YF  P       +   ++  K     + 
Sbjct: 69  KCLYHLNDNINFVYQLSLYVLYKSIKMIITYLYFNLPEYMCHYFLNIYVMFFKKKKGNMS 128

Query: 367 YVN*NAKH*NISNVLPF*EKQLHIQLFTSKLLYSF 263
           Y+    K  N  N++    KQ +     +KL  SF
Sbjct: 129 YIMKKMKK-NYRNIMIHVNKQ-NKSYIRAKLCNSF 161


>UniRef50_Q8M9V8 Cluster: Cell division protein; n=1;
           Chaetosphaeridium globosum|Rep: Cell division protein -
           Chaetosphaeridium globosum
          Length = 1627

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 24/89 (26%), Positives = 39/89 (43%)
 Frame = -3

Query: 454 FFFYFEEPRNASVVTNKIVLIKNNHNYLKYVN*NAKH*NISNVLPF*EKQLHIQLFTSKL 275
           F F+ ++  N  + +   VLI NN+N+ K +  N K   +S    F      I +     
Sbjct: 304 FKFFIQKTNNRFLESKNRVLISNNYNFYKNIKKNLKKQQLSQ-FKFNSLLQIIYILKENR 362

Query: 274 LYSFKIPSSNPQSCFLKITILITINSNFY 188
            YS+ I   N ++  LK     T N+N +
Sbjct: 363 NYSYNIHLENNRN--LKTIYYFTDNNNLF 389


>UniRef50_Q7RQJ8 Cluster: Putative uncharacterized protein PY01098;
           n=13; Plasmodium (Vinckeia)|Rep: Putative
           uncharacterized protein PY01098 - Plasmodium yoelii
           yoelii
          Length = 1866

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 260 NTIKQPPKLFLKNYDFNYY*FKFLLHSIYYNFRYITNSKVD 138
           N + +  KL L  Y+ N Y +K L H  Y N  +IT++ +D
Sbjct: 745 NILDEFIKLVLNLYNINIYVYKNLFHKFYINSLFITSTFID 785


>UniRef50_Q7RQ69 Cluster: Putative uncharacterized protein PY01234;
            n=13; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY01234 - Plasmodium yoelii yoelii
          Length = 3623

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
 Frame = -3

Query: 388  NNHN-YLKYVN*NAK-H*NISNVL---PF*EKQLHIQLFTSKLLYSFKIPSSNPQSCFLK 224
            N HN ++KY++ N   + NISN +   P  + Q+HI  + +KLL +  + ++N  S  L 
Sbjct: 1746 NQHNEHIKYLSNNQSFNQNISNQINNIPLEDLQMHIDNYNTKLLQNTNLNNNNNNSENLM 1805

Query: 223  ITILITINSNFY 188
                I +NS  Y
Sbjct: 1806 SNKYIYLNSKKY 1817


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,936,489
Number of Sequences: 1657284
Number of extensions: 10374133
Number of successful extensions: 21765
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21745
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)