Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0615
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   0.70 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.3  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect(2) = 0.70
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -3

Query: 475 YNTLCIFFFFYFEEPRNASVVTNKIV 398
           ++  CI FF Y    + +++ T+K++
Sbjct: 13  FSFCCILFFIYLYWQQTSNLTTSKLL 38



 Score = 20.6 bits (41), Expect(2) = 0.70
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 292 LFTSKLLYSFKIP 254
           L TSKLLY+++ P
Sbjct: 32  LTTSKLLYTYRQP 44


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -3

Query: 589 LILLLKSRHVKLRIAPYQCLCEFMTR--INTVYRISLYLLYNTLCIFFFFY 443
           L+ LL   +  L +    C+  F +   I T++ +   +L   LCI++F+Y
Sbjct: 193 LLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYY 243


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -3

Query: 232 FLKITILITINSNFYCTQFTTIFATLQTVRLITTVTFLQ 116
           +L+   L ++ ++  CT+   +FA    + ++TTVT  +
Sbjct: 62  WLQDDALKSVYASLLCTEKIFLFAIYTNLSILTTVTIFK 100


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
 Frame = -1

Query: 369 NMSIEMPNTRTLAMFYHFKKNNCTFNYLLLNYFT----HLKYHQ 250
           ++ I   N RT +  + F +     +YLL +YF       KY+Q
Sbjct: 120 SLIINYENQRTRSRIHLFVRYVFVTSYLLFDYFVQRNQEYKYYQ 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,270
Number of Sequences: 336
Number of extensions: 3231
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)