Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0615
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    25   2.3  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          25   3.0  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          25   3.0  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          25   3.0  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           25   3.0  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   9.2  

>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 248 QPPKLFLKNYDFNYY 204
           +PP+++  NY +NYY
Sbjct: 154 KPPRIYNNNYYYNYY 168


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +3

Query: 36  YAFSCSFHR*TVANLKQNICFVSLE 110
           Y+F+ +  R  V ++K+ +C+V+L+
Sbjct: 199 YSFTTTAEREIVRDIKEKLCYVALD 223


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +3

Query: 36  YAFSCSFHR*TVANLKQNICFVSLE 110
           Y+F+ +  R  V ++K+ +C+V+L+
Sbjct: 199 YSFTTTAEREIVRDIKEKLCYVALD 223


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +3

Query: 36  YAFSCSFHR*TVANLKQNICFVSLE 110
           Y+F+ +  R  V ++K+ +C+V+L+
Sbjct: 199 YSFTTTAEREIVRDIKEKLCYVALD 223


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +3

Query: 36  YAFSCSFHR*TVANLKQNICFVSLE 110
           Y+F+ +  R  V ++K+ +C+V+L+
Sbjct: 199 YSFTTTAEREIVRDIKEKLCYVALD 223


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 531 RHWYGAILNFTCLDFSSKINYQF*L*ILNGCNNCAIESPTTLRWQLF 671
           R    A  +F+ L FS  I Y +   ++ G   C I+     RWQL+
Sbjct: 342 RKLVAAAWSFSIL-FSLPITYFYEERLIQGKMQCWIDLVEAWRWQLY 387


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,194
Number of Sequences: 2352
Number of extensions: 11779
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)