Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0615
         (696 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT006023-1|AAO74706.1|  116|Drosophila melanogaster GH28883p pro...    31   2.0  
AE014298-2815|AAF48932.3|  347|Drosophila melanogaster CG7990-PB...    31   2.0  
AE014298-2814|AAN09483.1|  325|Drosophila melanogaster CG7990-PA...    31   2.0  
BT029081-1|ABJ17014.1|  339|Drosophila melanogaster IP10546p pro...    29   8.0  
AE014296-2627|AAF49545.1|  339|Drosophila melanogaster CG13075-P...    29   8.0  

>BT006023-1|AAO74706.1|  116|Drosophila melanogaster GH28883p
           protein.
          Length = 116

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 302 QLFFLKW*NIANVLVFGISIDIFQIVMIIFYKNNFICHNARVAWF 436
           QL  +KW  I    +F +SI     +++ F K+ F CH+   +WF
Sbjct: 28  QLLSIKWKKI----LFAVSILSTVGLLVFFAKHRFYCHDLAFSWF 68


>AE014298-2815|AAF48932.3|  347|Drosophila melanogaster CG7990-PB,
           isoform B protein.
          Length = 347

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 302 QLFFLKW*NIANVLVFGISIDIFQIVMIIFYKNNFICHNARVAWF 436
           QL  +KW  I    +F +SI     +++ F K+ F CH+   +WF
Sbjct: 259 QLLSIKWKKI----LFAVSILSTVGLLVFFAKHRFYCHDLAFSWF 299


>AE014298-2814|AAN09483.1|  325|Drosophila melanogaster CG7990-PA,
           isoform A protein.
          Length = 325

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 302 QLFFLKW*NIANVLVFGISIDIFQIVMIIFYKNNFICHNARVAWF 436
           QL  +KW  I    +F +SI     +++ F K+ F CH+   +WF
Sbjct: 237 QLLSIKWKKI----LFAVSILSTVGLLVFFAKHRFYCHDLAFSWF 277


>BT029081-1|ABJ17014.1|  339|Drosophila melanogaster IP10546p
           protein.
          Length = 339

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 256 PSSNPQSCFLKITILITINSNFYCTQFTTIFATL 155
           PS+NP   F +IT   T NS  YC +  T +  L
Sbjct: 192 PSTNPSYFFTRITDDSTCNSYLYCQKSGTTWVAL 225


>AE014296-2627|AAF49545.1|  339|Drosophila melanogaster CG13075-PA
           protein.
          Length = 339

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 256 PSSNPQSCFLKITILITINSNFYCTQFTTIFATL 155
           PS+NP   F +IT   T NS  YC +  T +  L
Sbjct: 192 PSTNPSYFFTRITDDSTCNSYLYCQKSGTTWVAL 225


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,670,478
Number of Sequences: 53049
Number of extensions: 475171
Number of successful extensions: 793
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)