Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0615
(696 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 26 0.30
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.2
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 3.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.7
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 4.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 4.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 4.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 4.8
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 4.8
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 6.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 8.5
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 8.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 8.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 8.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 8.5
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 8.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 8.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 8.5
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 8.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.5
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 26.2 bits (55), Expect = 0.30
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 436 EPRNASVVTNKIVLIKNNHNYLKYVN*NAKH*NISN 329
EP+ S ++NK + NN+N Y N N + N +N
Sbjct: 78 EPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNN 113
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 436 EPRNASVVTNKIVLIKNNHNYLKYVN*NAKH*NISN 329
EP+ S ++NK + NN+ Y Y N N + N +N
Sbjct: 311 EPKIISSLSNKTIHNNNNYKY-NYNNNNYNNNNYNN 345
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 436 EPRNASVVTNKIVLIKNNHNYLKYVN*NAKH*NISNV 326
EP+ S ++NK + NN+N Y N + NI+ +
Sbjct: 78 EPKIISSLSNKTIHNNNNYNNNNYNNYKKLYYNINYI 114
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 436 EPRNASVVTNKIVLIKNNHNYLKYVN*NAK 347
EP+ S ++NK I NN+NY N N K
Sbjct: 78 EPKIISSLSNK--TIHNNNNYKYNYNNNCK 105
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 436 EPRNASVVTNKIVLIKNNHNYLKYVN 359
EP+ S ++NK + NN+N Y N
Sbjct: 311 EPKIISSLSNKTIHNNNNYNNNNYNN 336
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 436 EPRNASVVTNKIVLIKNNHNYLKYVN*N 353
EP+ S + N + NN+ L+Y N N
Sbjct: 300 EPKIISSLLNNTIHNNNNYKKLQYYNIN 327
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 436 EPRNASVVTNKIVLIKNNHNYLKYVN*N 353
EP+ S + N + NN+ L+Y N N
Sbjct: 311 EPKIISSLLNNTIHNNNNYKKLQYYNIN 338
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 436 EPRNASVVTNKIVLIKNNHNYLKYVN*N 353
EP+ S + N + NN+ L+Y N N
Sbjct: 311 EPKIISSLLNNTIHNNNNYKKLQYYNIN 338
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 436 EPRNASVVTNKIVLIKNNHNYLKYVN*N 353
EP+ S + N + NN+ L+Y N N
Sbjct: 300 EPKIISSLLNNTIHNNNNYKKLQYYNIN 327
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -1
Query: 321 HFKKNNCTFNYLLLNYFTHLKYH 253
+F KN + +++L+NYF L ++
Sbjct: 6 YFGKNFPSTSFILINYFIFLYFN 28
Score = 21.4 bits (43), Expect = 8.5
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 677 VTKQLPA-KRGWGFNSTIIASI*NLKLKLIINFTAKI*TC 561
+T P K+ +G NSTII + K ++NF C
Sbjct: 117 ITNSTPLLKKLYGGNSTIIFLLIRFKSFSLLNFNLLFFNC 156
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.4
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -3
Query: 436 EPRNASVVTNKIVLIKNNHNYLKYVN*NAKH*NISN 329
EP+ S ++NK I NN+NY KY N N K+ N +N
Sbjct: 78 EPKIISSLSNK--TIHNNNNY-KY-NYNNKY-NYNN 108
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 394 IKNNHNYLKYVN*NAKH*NISNVL 323
+ NN+NY Y N N + N + L
Sbjct: 85 LSNNYNYSNYNNYNNNYNNYNKKL 108
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 251 KQPPKLFLKNYDFNYY*FKFLLHSIYYNFRYI 156
K+P + + ++NY + +YYN YI
Sbjct: 77 KEPKIISSLSNNYNYNNYNNNYKPLYYNINYI 108
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 251 KQPPKLFLKNYDFNYY*FKFLLHSIYYNFRYI 156
K+P + + ++NY + +YYN YI
Sbjct: 77 KEPKIISSLSNNYNYNNYNNNYKPLYYNINYI 108
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 251 KQPPKLFLKNYDFNYY*FKFLLHSIYYNFRYI 156
K+P + + ++NY + +YYN YI
Sbjct: 77 KEPKIISSLSNNYNYNNYNNNYKPLYYNINYI 108
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 251 KQPPKLFLKNYDFNYY*FKFLLHSIYYNFRYI 156
K+P + + ++NY + +YYN YI
Sbjct: 77 KEPKIISSLSNNYNYNNYNNNYKPLYYNINYI 108
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 436 EPRNASVVTNKIVLIKNNHNYLKYVN*N 353
EP+ S ++NK + NN+ Y Y N N
Sbjct: 78 EPKIISSLSNKTIHNNNNYKY-NYNNNN 104
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 436 EPRNASVVTNKIVLIKNNHNYLKYVN*N 353
EP+ S ++NK + NN+ Y Y N N
Sbjct: 78 EPKIISSLSNKTIHNNNNYKY-NYNNNN 104
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 436 EPRNASVVTNKIVLIKNNHNYLKYVN*N 353
EP+ S ++NK + NN+ Y Y N N
Sbjct: 78 EPKIISSLSNKTIHNNNNYKY-NYNNNN 104
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3
Query: 532 LCEFMTRINTVYRISLYL 479
+C+ +T + +YR+ LYL
Sbjct: 27 VCKDITSTSALYRLKLYL 44
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 251 KQPPKLFLKNYDFNYY*FKFLLHSIYYNFRYI 156
K+P + + ++NY + +YYN YI
Sbjct: 310 KEPKIISSLSNNYNYNNYNNNYKPLYYNINYI 341
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 251 KQPPKLFLKNYDFNYY*FKFLLHSIYYNFRYI 156
K+P + + ++NY + +YYN YI
Sbjct: 310 KEPKIISSLSNNYNYNNYNNNYKPLYYNINYI 341
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 251 KQPPKLFLKNYDFNYY*FKFLLHSIYYNFRYI 156
K+P + + ++NY + +YYN YI
Sbjct: 310 KEPKIISSLSNNYNYNNYNNNYKPLYYNINYI 341
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 251 KQPPKLFLKNYDFNYY*FKFLLHSIYYNFRYI 156
K+P + + ++NY + +YYN YI
Sbjct: 299 KEPKIISSLSNNYNYNNYNNNYKPLYYNINYI 330
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,160
Number of Sequences: 438
Number of extensions: 3342
Number of successful extensions: 36
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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