Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0612
(733 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VR89 Cluster: RNA-binding protein pno1; n=25; Eukaryo... 212 7e-54
UniRef50_Q9NRX1 Cluster: RNA-binding protein PNO1; n=28; Eumetaz... 194 2e-48
UniRef50_Q99216 Cluster: Pre-rRNA-processing protein PNO1; n=36;... 175 9e-43
UniRef50_Q54K66 Cluster: Putative uncharacterized protein; n=2; ... 166 6e-40
UniRef50_O18216 Cluster: RNA-binding protein pno-1; n=4; Bilater... 163 4e-39
UniRef50_Q5KNN7 Cluster: Pre-rRNA-processing protein PNO1; n=3; ... 152 7e-36
UniRef50_Q4UI79 Cluster: Putative uncharacterized protein; n=3; ... 146 6e-34
UniRef50_A4IBP5 Cluster: Putative uncharacterized protein; n=4; ... 138 1e-31
UniRef50_Q7S929 Cluster: Putative uncharacterized protein NCU079... 135 1e-30
UniRef50_A5K364 Cluster: Putative uncharacterized protein; n=4; ... 132 6e-30
UniRef50_Q7QWE6 Cluster: GLP_336_28189_28794; n=1; Giardia lambl... 122 9e-27
UniRef50_A4QTA1 Cluster: Putative uncharacterized protein; n=1; ... 119 8e-26
UniRef50_A2F7I8 Cluster: KH domain containing protein; n=1; Tric... 112 7e-24
UniRef50_Q86EP0 Cluster: Clone ZZD158 mRNA sequence; n=1; Schist... 111 2e-23
UniRef50_Q8SU53 Cluster: Putative uncharacterized protein ECU11_... 102 1e-20
UniRef50_A4WLY5 Cluster: KH, type 1, domain protein; n=4; Pyroba... 41 0.036
UniRef50_Q8TH62 Cluster: Predicted RNA-binding protein containin... 40 0.063
UniRef50_A3DNJ3 Cluster: KH, type 1, domain protein; n=3; Desulf... 40 0.083
UniRef50_Q4JA52 Cluster: Conserved Archaeal protein; n=1; Sulfol... 37 0.44
UniRef50_A3XGW8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_A7D0D1 Cluster: KH, type 1, domain protein; n=6; Euryar... 35 2.4
UniRef50_Q5NW02 Cluster: RNA-binding protein; n=7; Archaea|Rep: ... 34 3.1
UniRef50_A0EEH9 Cluster: Chromosome undetermined scaffold_91, wh... 33 5.5
UniRef50_Q2FN99 Cluster: KH, type 1; n=1; Methanospirillum hunga... 33 5.5
UniRef50_Q9X6W1 Cluster: Class A beta-lactamase TLA-1; n=6; Bact... 33 9.5
>UniRef50_Q9VR89 Cluster: RNA-binding protein pno1; n=25;
Eukaryota|Rep: RNA-binding protein pno1 - Drosophila
melanogaster (Fruit fly)
Length = 240
Score = 212 bits (518), Expect = 7e-54
Identities = 115/204 (56%), Positives = 133/204 (65%)
Frame = +3
Query: 84 METENISVDDFLPAKKTMKLKNIKRKATDDTGDGMEVEEPTIGEXXXXXXXXXXXXXXXX 263
ME ENI D F PAK+ K + D M+V+E T E
Sbjct: 1 MEAENIRADAFEPAKRATK-RGASGGGQQDVE--MQVDEATGIEGQVLGSSRASAPPKAK 57
Query: 264 XDPNESKVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETK 443
+E +RKV+VP HRY+ LKE W+KIFTP+VEH+ LQ+RFN K R VE++VGPET
Sbjct: 58 RARSE----LRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETP 113
Query: 444 DIANLQKAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAG 623
DIANLQ+ ADFV+AF+ GFEV FVESFE+KDVKTL GDH SRAIGRLAG
Sbjct: 114 DIANLQRGADFVRAFLCGFEVDDALALLRLEDLFVESFEIKDVKTLRGDHQSRAIGRLAG 173
Query: 624 KAGRTKFTIENVTKTRIVLADSKI 695
K GRTKFTIENVTKTRIVLADSKI
Sbjct: 174 KGGRTKFTIENVTKTRIVLADSKI 197
>UniRef50_Q9NRX1 Cluster: RNA-binding protein PNO1; n=28;
Eumetazoa|Rep: RNA-binding protein PNO1 - Homo sapiens
(Human)
Length = 252
Score = 194 bits (473), Expect = 2e-48
Identities = 93/138 (67%), Positives = 109/138 (78%)
Frame = +3
Query: 282 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 461
K RK+ VPA+RYTPLKE+W+KIFTPIVEHL LQ+RFN K+RNVEI+ ETKD++ L
Sbjct: 72 KEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALT 131
Query: 462 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 641
KAADFVKAFI GF+V F+ESFE+ DVK L GDHLSRAIGR+AGK G+TK
Sbjct: 132 KAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTK 191
Query: 642 FTIENVTKTRIVLADSKI 695
FTIENVT+TRIVLAD K+
Sbjct: 192 FTIENVTRTRIVLADVKV 209
>UniRef50_Q99216 Cluster: Pre-rRNA-processing protein PNO1; n=36;
Eukaryota|Rep: Pre-rRNA-processing protein PNO1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 274
Score = 175 bits (426), Expect = 9e-43
Identities = 84/142 (59%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Frame = +3
Query: 273 NESKVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPE-TKDI 449
N+ K RK+ VP HR TPL+ SW KI+ P+VEHL LQVR N KT++VE++ P+ T D
Sbjct: 90 NKIKFESRKIMVPPHRMTPLRNSWTKIYPPLVEHLKLQVRMNLKTKSVELRTNPKFTTDP 149
Query: 450 ANLQKAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKA 629
LQK ADF+KAF GF++ ++E+FEVKDVKTL GDHLSRAIGR+AGK
Sbjct: 150 GALQKGADFIKAFTLGFDLDDSIALLRLDDLYIETFEVKDVKTLTGDHLSRAIGRIAGKD 209
Query: 630 GRTKFTIENVTKTRIVLADSKI 695
G+TKF IEN T+TRIVLADSKI
Sbjct: 210 GKTKFAIENATRTRIVLADSKI 231
>UniRef50_Q54K66 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Dictyostelium discoideum AX4
Length = 239
Score = 166 bits (403), Expect = 6e-40
Identities = 80/135 (59%), Positives = 99/135 (73%)
Frame = +3
Query: 291 MRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQKAA 470
+RKV +P +R PLK +W +I+ PIV HL LQ+R NTKTR VE+K TK+ + LQKAA
Sbjct: 62 IRKVTIPFNRIAPLKANWQQIYEPIVTHLKLQIRMNTKTRKVELKTSKSTKETSALQKAA 121
Query: 471 DFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTKFTI 650
DFV AF GFEV +++SF+V+DVK L GD+LSRAIGR+AGK G+TKFTI
Sbjct: 122 DFVHAFSLGFEVNDAVAILRLDDLYIDSFDVEDVKILKGDNLSRAIGRVAGKDGKTKFTI 181
Query: 651 ENVTKTRIVLADSKI 695
ENVTKTRIVLAD +I
Sbjct: 182 ENVTKTRIVLADKRI 196
>UniRef50_O18216 Cluster: RNA-binding protein pno-1; n=4;
Bilateria|Rep: RNA-binding protein pno-1 -
Caenorhabditis elegans
Length = 277
Score = 163 bits (396), Expect = 4e-39
Identities = 82/135 (60%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Frame = +3
Query: 294 RKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQKAAD 473
R V VP HRYTPLK++W+ IFTPIV++L LQVRFN K R VEI+ + +D +LQKA D
Sbjct: 100 RVVPVPKHRYTPLKDNWVNIFTPIVKNLGLQVRFNLKKRQVEIRNPVDREDTTDLQKATD 159
Query: 474 FVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVK-TLNGDHLSRAIGRLAGKAGRTKFTI 650
FV+AFI GFEV F+E+FEV DVK +L GDH+SRAIGR+AGK GRTK I
Sbjct: 160 FVRAFILGFEVNDAIALIRLDHLFLETFEVADVKHSLKGDHVSRAIGRIAGKDGRTKLVI 219
Query: 651 ENVTKTRIVLADSKI 695
EN TKTRIV+A++KI
Sbjct: 220 ENTTKTRIVVANTKI 234
>UniRef50_Q5KNN7 Cluster: Pre-rRNA-processing protein PNO1; n=3;
Dikarya|Rep: Pre-rRNA-processing protein PNO1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 266
Score = 152 bits (369), Expect = 7e-36
Identities = 70/138 (50%), Positives = 96/138 (69%)
Frame = +3
Query: 282 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 461
K R++ +P HR TPLK W+ ++TP+VE L LQVR N + + VE+K T D +Q
Sbjct: 86 KNEFRRIPIPPHRMTPLKRDWVNLYTPMVEMLGLQVRMNPQRKAVELKTSGHTVDSGAIQ 145
Query: 462 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 641
K ADFVKA+ GF+V +++SFE+KDVKTL+GDHL+RAIGR+AG+ G+ K
Sbjct: 146 KGADFVKAYALGFDVNDALALLRLDDLYLDSFEIKDVKTLHGDHLARAIGRIAGEGGKVK 205
Query: 642 FTIENVTKTRIVLADSKI 695
F+IEN ++TRIVLAD+ I
Sbjct: 206 FSIENASRTRIVLADTHI 223
>UniRef50_Q4UI79 Cluster: Putative uncharacterized protein; n=3;
Piroplasmida|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 238
Score = 146 bits (353), Expect = 6e-34
Identities = 68/137 (49%), Positives = 96/137 (70%)
Frame = +3
Query: 285 VAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQK 464
V +R++ VP +R TPL+ +W I +VE L LQ+R TKT+ VE++ E D++ LQK
Sbjct: 59 VNLRRIPVPPNRMTPLQNNWENIVRTVVERLELQIRMCTKTKCVEVRPSREGMDLSLLQK 118
Query: 465 AADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTKF 644
A D+++AF+ GFE+ F+ESFE+ DVK L+GDHLSR IGR++GK GRTK
Sbjct: 119 AQDYIRAFMLGFELKDAEAILRLEDIFIESFEINDVKRLHGDHLSRCIGRISGKDGRTKH 178
Query: 645 TIENVTKTRIVLADSKI 695
IEN+TKTR++LA++KI
Sbjct: 179 AIENMTKTRVILANNKI 195
>UniRef50_A4IBP5 Cluster: Putative uncharacterized protein; n=4;
Trypanosomatidae|Rep: Putative uncharacterized protein -
Leishmania infantum
Length = 221
Score = 138 bits (335), Expect = 1e-31
Identities = 68/145 (46%), Positives = 95/145 (65%), Gaps = 11/145 (7%)
Frame = +3
Query: 294 RKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIAN------ 455
R + +P HR+ PLK+ W++++TPIVE L++R N KTR+V+++ P T
Sbjct: 34 RSIKIPHHRFPPLKKVWMEVYTPIVEQCKLEIRMNLKTRSVDLRTSPSTSTAEGDQSGNA 93
Query: 456 ----LQKAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVK-TLNGDHLSRAIGRLA 620
LQKA DFVKA I GF+V ++E FE+KDV+ L GD+LSR IGR++
Sbjct: 94 SKVMLQKAEDFVKAVIAGFDVRDAVALLRMDDVYIEGFEIKDVRANLQGDNLSRCIGRIS 153
Query: 621 GKAGRTKFTIENVTKTRIVLADSKI 695
G G+TK+TIENVT+TRIV+AD+KI
Sbjct: 154 GSHGKTKYTIENVTRTRIVVADTKI 178
>UniRef50_Q7S929 Cluster: Putative uncharacterized protein
NCU07956.1; n=2; Sordariales|Rep: Putative
uncharacterized protein NCU07956.1 - Neurospora crassa
Length = 257
Score = 135 bits (326), Expect = 1e-30
Identities = 66/135 (48%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Frame = +3
Query: 294 RKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQKAAD 473
RK+ +P +R + LK +W KI+ P+VEH LQVR N K + VE++ T +LQ AD
Sbjct: 80 RKIGIPPNRMSALKANWTKIYPPLVEHCKLQVRMNIKEKRVELRSSRHTTTPESLQMGAD 139
Query: 474 FVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVK-TLNGDHLSRAIGRLAGKAGRTKFTI 650
FV AF GF++ +++SF+VKDV+ TL D L RAIGR+AGK G+TKF I
Sbjct: 140 FVSAFAMGFDIDDAIALLRLDSLYIQSFDVKDVRQTLGPDALGRAIGRIAGKDGKTKFAI 199
Query: 651 ENVTKTRIVLADSKI 695
EN TKTRIVLA S++
Sbjct: 200 ENATKTRIVLAGSRV 214
>UniRef50_A5K364 Cluster: Putative uncharacterized protein; n=4;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 264
Score = 132 bits (320), Expect = 6e-30
Identities = 62/135 (45%), Positives = 88/135 (65%)
Frame = +3
Query: 291 MRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQKAA 470
MR + +P HR + +K +W+++ PIV HL L++R N +E++ T+D NLQK++
Sbjct: 89 MRILTIPKHRISSVKTNWMELIKPIVTHLKLEIRMNGD--KIEVRTCKLTEDKNNLQKSS 146
Query: 471 DFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTKFTI 650
D++KA++ GF + +VESF+VKDVK L GDHLSR IGR+ G G TK+ I
Sbjct: 147 DYIKAYLLGFTIEDSLALLRIDDLYVESFQVKDVKILKGDHLSRCIGRICGSNGATKYAI 206
Query: 651 ENVTKTRIVLADSKI 695
EN TKTRIV+A KI
Sbjct: 207 ENATKTRIVIAGDKI 221
>UniRef50_Q7QWE6 Cluster: GLP_336_28189_28794; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_28189_28794 - Giardia lamblia
ATCC 50803
Length = 201
Score = 122 bits (294), Expect = 9e-27
Identities = 60/144 (41%), Positives = 87/144 (60%), Gaps = 1/144 (0%)
Frame = +3
Query: 267 DPNESKVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKD 446
+ + +RKV VP +R +P+K W I TPIV LLL +R+N R +EI+ +T
Sbjct: 18 EDGQKSFELRKVMVPYNRISPIKREWNNICTPIVTELLLDIRYNISGRCIEIRRNAKTVA 77
Query: 447 IANLQKAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVK-TLNGDHLSRAIGRLAG 623
L + DF++A GFEV ++++F++ +VK L GD++SRAIGR+AG
Sbjct: 78 PNALDRGQDFLRAITLGFEVQDALAFLKMDNLYIDTFDITNVKLVLKGDNMSRAIGRIAG 137
Query: 624 KAGRTKFTIENVTKTRIVLADSKI 695
G+ KFTIEN +KTRIVLAD +
Sbjct: 138 SGGKVKFTIENASKTRIVLADKTV 161
>UniRef50_A4QTA1 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 245
Score = 119 bits (286), Expect = 8e-26
Identities = 62/134 (46%), Positives = 82/134 (61%)
Frame = +3
Query: 294 RKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQKAAD 473
RKV +P HR TPLK+ W +I+ +VEHL LQ +N+ D
Sbjct: 88 RKVPIPPHRMTPLKKDWTQIYEALVEHLKLQYG-------------------SNMLPTED 128
Query: 474 FVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTKFTIE 653
FVKA+ GFEV ++++FE+KDVK+L GDHL+R +GR+AGK G+TKF IE
Sbjct: 129 FVKAYTLGFEVQDAIALIRVPELYIQTFEIKDVKSLTGDHLARGVGRIAGKDGKTKFAIE 188
Query: 654 NVTKTRIVLADSKI 695
N ++TRIVLADSKI
Sbjct: 189 NASRTRIVLADSKI 202
>UniRef50_A2F7I8 Cluster: KH domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: KH domain containing
protein - Trichomonas vaginalis G3
Length = 196
Score = 112 bits (270), Expect = 7e-24
Identities = 55/134 (41%), Positives = 85/134 (63%)
Frame = +3
Query: 294 RKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQKAAD 473
R+VA+P +R T LK ++ +I PI+++L L +R+N++ VE++ T + + KA D
Sbjct: 20 RRVAIPPNRRTYLKNNFPQITEPIIKYLKLDLRYNSRKGCVELRTNALTSNPNAMTKAID 79
Query: 474 FVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTKFTIE 653
F+ A GFE+ F++ F+V D+K + GD+LSRA+GR+AGK G+ KFTIE
Sbjct: 80 FLTAINAGFEIADALALVRLEDIFMDVFDVTDIKLIEGDNLSRAVGRIAGKGGQIKFTIE 139
Query: 654 NVTKTRIVLADSKI 695
N T TRI L +K+
Sbjct: 140 NATHTRISLTGTKV 153
>UniRef50_Q86EP0 Cluster: Clone ZZD158 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD158 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 191
Score = 111 bits (266), Expect = 2e-23
Identities = 57/145 (39%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Frame = +3
Query: 270 PNESKVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGP--ETK 443
P +R + VP +R TP++ SW I + + L L V T ++ +I + P ET+
Sbjct: 4 PESKSCEIRSLIVPRNRRTPVRNSWASIVEVLTKQLKLMVCMKTDKKSWKIFIKPSLETR 63
Query: 444 DIANLQKAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVK-TLNGDHLSRAIGRLA 620
D ++QK DFV AF+ GF+ +V SF + DVK TL GDH++RA+GR+
Sbjct: 64 DAQHIQKGYDFVNAFLKGFKYEDALAVVRIDGIYVNSFHITDVKQTLKGDHMARAVGRIC 123
Query: 621 GKAGRTKFTIENVTKTRIVLADSKI 695
G GR + IEN T+TRIV+AD I
Sbjct: 124 GAKGRIRMCIENATRTRIVVADETI 148
>UniRef50_Q8SU53 Cluster: Putative uncharacterized protein
ECU11_0750; n=2; Microsporidia|Rep: Putative
uncharacterized protein ECU11_0750 - Encephalitozoon
cuniculi
Length = 196
Score = 102 bits (244), Expect = 1e-20
Identities = 44/139 (31%), Positives = 83/139 (59%)
Frame = +3
Query: 279 SKVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANL 458
S + R V + + +K+ W+KI+TPIVE +Q+R N K ++V+++ T+D + L
Sbjct: 2 SGIQTRSVPIHPRKMKSMKDEWMKIYTPIVEMCKVQIRMNIKGKSVDMRTCEHTEDPSYL 61
Query: 459 QKAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRT 638
+++A +++A GF + F++ FE+ +VKTL G H+ RA+GR+ G+ G+T
Sbjct: 62 ERSAQYIEAINIGFPIEDAIALLKFSDVFLDRFEISEVKTLRGLHIERAVGRIIGREGKT 121
Query: 639 KFTIENVTKTRIVLADSKI 695
+ IE ++++I++ I
Sbjct: 122 RDAIEEFSRSKIIVQGQTI 140
>UniRef50_A4WLY5 Cluster: KH, type 1, domain protein; n=4;
Pyrobaculum|Rep: KH, type 1, domain protein -
Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)
Length = 184
Score = 40.7 bits (91), Expect = 0.036
Identities = 29/105 (27%), Positives = 50/105 (47%)
Frame = +3
Query: 381 LQVRFNTKTRNVEIKVGPETKDIANLQKAADFVKAFIYGFEVXXXXXXXXXXXXFVESFE 560
++V + K +++ GP+ A L K + KA GF + +
Sbjct: 45 IRVELDEKELYIKLTPGPDAAVDAIL-KVREMAKAVALGF-APDQAMALESDEYVLTVID 102
Query: 561 VKDVKTLNGDHLSRAIGRLAGKAGRTKFTIENVTKTRIVLADSKI 695
+K+V T +HL R GR+ G+ GR K TIEN+ + +V+ D+ +
Sbjct: 103 LKEV-TDKPNHLRRIKGRIIGEDGRAKKTIENLAQVAMVIGDTYV 146
>UniRef50_Q8TH62 Cluster: Predicted RNA-binding protein containing
KH domain; n=2; Euryarchaeota|Rep: Predicted RNA-binding
protein containing KH domain - Methanopyrus kandleri
Length = 202
Score = 39.9 bits (89), Expect = 0.063
Identities = 28/100 (28%), Positives = 46/100 (46%)
Frame = +3
Query: 363 IVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQKAADFVKAFIYGFEVXXXXXXXXXXXX 542
I E +++R ++KT VEI+ KD +L KA + V A GF
Sbjct: 36 IEEKTGVELRIDSKTGEVEIRPTERVKDPLDLIKAKECVLAIGRGFSPERAFRLLREEDA 95
Query: 543 FVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTKFTIENVT 662
+E ++ ++ N L R R+ G+ GRT+ IE ++
Sbjct: 96 SLEVIDLYELVGRNPKALERQRARIIGREGRTRQLIEELS 135
>UniRef50_A3DNJ3 Cluster: KH, type 1, domain protein; n=3;
Desulfurococcales|Rep: KH, type 1, domain protein -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 200
Score = 39.5 bits (88), Expect = 0.083
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +3
Query: 387 VRFNTKTRNVEIKVGPETKDIANLQKAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVK 566
+ ++ T V I+ T L KA D V+A YGF + V
Sbjct: 47 ITIDSTTGTVIIEPASPTTTALELMKARDVVRAIAYGFSPERAFRLLDEDQVLL----VI 102
Query: 567 DVKTLNGD---HLSRAIGRLAGKAGRTKFTIENVTKTRI 674
D+K GD HL R GR+ G+ G+ + IE +T T I
Sbjct: 103 DLKQYVGDRPNHLQRVKGRIIGEGGKARRIIEEMTGTYI 141
>UniRef50_Q4JA52 Cluster: Conserved Archaeal protein; n=1;
Sulfolobus acidocaldarius|Rep: Conserved Archaeal
protein - Sulfolobus acidocaldarius
Length = 178
Score = 37.1 bits (82), Expect = 0.44
Identities = 28/103 (27%), Positives = 49/103 (47%)
Frame = +3
Query: 387 VRFNTKTRNVEIKVGPETKDIANLQKAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVK 566
+ F+ T+ +I+V P+ + N K + A +GFE +E +K
Sbjct: 28 INFDEVTK--QIRVIPKDNNSYNAMKVISVINALGFGFEPNDAMRLMSDDYG-LEIINLK 84
Query: 567 DVKTLNGDHLSRAIGRLAGKAGRTKFTIENVTKTRIVLADSKI 695
+ T + + L R GR+ G+ G+TK TIE T +++ D +I
Sbjct: 85 EF-TNSVNSLRRIKGRVIGEKGKTKRTIEEYTGVIVLVKDHEI 126
>UniRef50_A3XGW8 Cluster: Putative uncharacterized protein; n=1;
Leeuwenhoekiella blandensis MED217|Rep: Putative
uncharacterized protein - Leeuwenhoekiella blandensis
MED217
Length = 476
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3
Query: 90 TENISVDDFLPAKKTMKLKNIKRKATDDTGDGMEVEEP 203
TEN+S DD LPA++T L+ I +D EVE+P
Sbjct: 196 TENVSKDDRLPAEETKSLQEIADAQKEDAIADAEVEDP 233
>UniRef50_A7D0D1 Cluster: KH, type 1, domain protein; n=6;
Euryarchaeota|Rep: KH, type 1, domain protein -
Halorubrum lacusprofundi ATCC 49239
Length = 180
Score = 34.7 bits (76), Expect = 2.4
Identities = 31/135 (22%), Positives = 60/135 (44%)
Frame = +3
Query: 291 MRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQKAA 470
M+ V VP R + + + I E +++ ++++ +V I+ E D A
Sbjct: 1 MQHVTVPQDRIGVVIGAGGETMREIEERANVRLDIDSESGSVAIE---ELDDPVAALVAP 57
Query: 471 DFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTKFTI 650
D +KA GF+ ++ ++ + T N + L R GR+ G+ GRT+ I
Sbjct: 58 DIIKAIGRGFKPETALSILDHDLRTLDLIDLSE-HTRNDNDLQRKKGRIIGENGRTRELI 116
Query: 651 ENVTKTRIVLADSKI 695
E ++ +V+ S +
Sbjct: 117 EELSGANVVVYGSTV 131
>UniRef50_Q5NW02 Cluster: RNA-binding protein; n=7; Archaea|Rep:
RNA-binding protein - uncultured archaeon
Length = 181
Score = 34.3 bits (75), Expect = 3.1
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 462 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 641
KA+D +KA GF ++ ++ + D L+R GR+ G+ G+T+
Sbjct: 57 KASDAIKAIARGFSPEKALKLLDSEDLILDMMDLSKITDTPSD-LTRIKGRIIGRGGKTR 115
Query: 642 FTIENVTKTRI 674
IE++T +I
Sbjct: 116 EIIESMTGAKI 126
>UniRef50_A0EEH9 Cluster: Chromosome undetermined scaffold_91, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_91,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 671
Score = 33.5 bits (73), Expect = 5.5
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 178 EMVWRLKSPQLGKAIQRSLEGTEKNIKKVQTLMRVKLQCEKLRSQLTDIH-HLRKA-G*R 351
E+ +RLK QL K + + E EKN K Q ++ + ++ + L +I KA G
Sbjct: 221 EIFFRLKKTQLIKLLDKQGEKFEKNDKFTQQSTKILQKLQEFCNGLENIKLSANKANGLY 280
Query: 352 YLLRLLNTYCY 384
YL R+L +YC+
Sbjct: 281 YLQRILLSYCW 291
>UniRef50_Q2FN99 Cluster: KH, type 1; n=1; Methanospirillum hungatei
JF-1|Rep: KH, type 1 - Methanospirillum hungatei (strain
JF-1 / DSM 864)
Length = 179
Score = 33.5 bits (73), Expect = 5.5
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +3
Query: 384 QVRFNTKTR----NVEIKVGPETKDIANLQKAADFVKAFIYGFEVXXXXXXXXXXXXFVE 551
++ TKTR + E V E +D +A + VKA GF ++E
Sbjct: 25 EIEEKTKTRIQVDSEEGLVSIEGEDADGFIQAVETVKAIARGFSPERAAILLEDPDLYLE 84
Query: 552 SFEVKDVKTLNGDHLSRAIGRLAGKAGRTKFTIENVTKTRI 674
E+ + + + R GR+ G+ GR++ I+++T T I
Sbjct: 85 IIELSEYAG-SDSKIERIRGRIIGRDGRSRAQIQDMTATEI 124
>UniRef50_Q9X6W1 Cluster: Class A beta-lactamase TLA-1; n=6;
Bacteria|Rep: Class A beta-lactamase TLA-1 - Escherichia
coli
Length = 314
Score = 32.7 bits (71), Expect = 9.5
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 45 TIKFHLSDEPSHKMETENISVDDFLPAKKTMKLKNIKRKATDDTGDG 185
T KFHL+ K++ ENIS+D L KK+ L N D DG
Sbjct: 82 TYKFHLALAVLDKLDKENISIDKKLFVKKSELLPNTWSPLRDKYPDG 128
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,691,466
Number of Sequences: 1657284
Number of extensions: 10334940
Number of successful extensions: 25522
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 24905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25508
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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