Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0612
         (733 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018152-1|AAH18152.1|  204|Homo sapiens PNO1 protein protein.        194   3e-49
BC008304-1|AAH08304.1|  252|Homo sapiens partner of NOB1 homolog...   194   3e-49
AK223118-1|BAD96838.1|  248|Homo sapiens putatative 28 kDa prote...   194   3e-49
AF349314-1|AAK29434.1|  252|Homo sapiens RNA-binding protein LOC...   194   3e-49
AF164799-1|AAF80763.1|  252|Homo sapiens putatative 28 kDa prote...   194   3e-49
AC017083-2|AAY14714.1|  252|Homo sapiens unknown protein.             194   3e-49
AY830839-1|AAW52510.1| 2434|Homo sapiens serine/threonine protei...    30   9.8  
AB002301-1|BAA20762.1| 2137|Homo sapiens KIAA0303 protein.             30   9.8  

>BC018152-1|AAH18152.1|  204|Homo sapiens PNO1 protein protein.
          Length = 204

 Score =  194 bits (473), Expect = 3e-49
 Identities = 93/138 (67%), Positives = 109/138 (78%)
 Frame = +3

Query: 282 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 461
           K   RK+ VPA+RYTPLKE+W+KIFTPIVEHL LQ+RFN K+RNVEI+   ETKD++ L 
Sbjct: 24  KEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALT 83

Query: 462 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 641
           KAADFVKAFI GF+V            F+ESFE+ DVK L GDHLSRAIGR+AGK G+TK
Sbjct: 84  KAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTK 143

Query: 642 FTIENVTKTRIVLADSKI 695
           FTIENVT+TRIVLAD K+
Sbjct: 144 FTIENVTRTRIVLADVKV 161


>BC008304-1|AAH08304.1|  252|Homo sapiens partner of NOB1 homolog
           (S. cerevisiae) protein.
          Length = 252

 Score =  194 bits (473), Expect = 3e-49
 Identities = 93/138 (67%), Positives = 109/138 (78%)
 Frame = +3

Query: 282 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 461
           K   RK+ VPA+RYTPLKE+W+KIFTPIVEHL LQ+RFN K+RNVEI+   ETKD++ L 
Sbjct: 72  KEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALT 131

Query: 462 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 641
           KAADFVKAFI GF+V            F+ESFE+ DVK L GDHLSRAIGR+AGK G+TK
Sbjct: 132 KAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTK 191

Query: 642 FTIENVTKTRIVLADSKI 695
           FTIENVT+TRIVLAD K+
Sbjct: 192 FTIENVTRTRIVLADVKV 209


>AK223118-1|BAD96838.1|  248|Homo sapiens putatative 28 kDa protein
           variant protein.
          Length = 248

 Score =  194 bits (473), Expect = 3e-49
 Identities = 93/138 (67%), Positives = 109/138 (78%)
 Frame = +3

Query: 282 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 461
           K   RK+ VPA+RYTPLKE+W+KIFTPIVEHL LQ+RFN K+RNVEI+   ETKD++ L 
Sbjct: 68  KEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALT 127

Query: 462 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 641
           KAADFVKAFI GF+V            F+ESFE+ DVK L GDHLSRAIGR+AGK G+TK
Sbjct: 128 KAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTK 187

Query: 642 FTIENVTKTRIVLADSKI 695
           FTIENVT+TRIVLAD K+
Sbjct: 188 FTIENVTRTRIVLADVKV 205


>AF349314-1|AAK29434.1|  252|Homo sapiens RNA-binding protein
           LOC56902 protein.
          Length = 252

 Score =  194 bits (473), Expect = 3e-49
 Identities = 93/138 (67%), Positives = 109/138 (78%)
 Frame = +3

Query: 282 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 461
           K   RK+ VPA+RYTPLKE+W+KIFTPIVEHL LQ+RFN K+RNVEI+   ETKD++ L 
Sbjct: 72  KEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALT 131

Query: 462 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 641
           KAADFVKAFI GF+V            F+ESFE+ DVK L GDHLSRAIGR+AGK G+TK
Sbjct: 132 KAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTK 191

Query: 642 FTIENVTKTRIVLADSKI 695
           FTIENVT+TRIVLAD K+
Sbjct: 192 FTIENVTRTRIVLADVKV 209


>AF164799-1|AAF80763.1|  252|Homo sapiens putatative 28 kDa protein
           protein.
          Length = 252

 Score =  194 bits (473), Expect = 3e-49
 Identities = 93/138 (67%), Positives = 109/138 (78%)
 Frame = +3

Query: 282 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 461
           K   RK+ VPA+RYTPLKE+W+KIFTPIVEHL LQ+RFN K+RNVEI+   ETKD++ L 
Sbjct: 72  KEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALT 131

Query: 462 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 641
           KAADFVKAFI GF+V            F+ESFE+ DVK L GDHLSRAIGR+AGK G+TK
Sbjct: 132 KAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTK 191

Query: 642 FTIENVTKTRIVLADSKI 695
           FTIENVT+TRIVLAD K+
Sbjct: 192 FTIENVTRTRIVLADVKV 209


>AC017083-2|AAY14714.1|  252|Homo sapiens unknown protein.
          Length = 252

 Score =  194 bits (473), Expect = 3e-49
 Identities = 93/138 (67%), Positives = 109/138 (78%)
 Frame = +3

Query: 282 KVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQ 461
           K   RK+ VPA+RYTPLKE+W+KIFTPIVEHL LQ+RFN K+RNVEI+   ETKD++ L 
Sbjct: 72  KEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALT 131

Query: 462 KAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTK 641
           KAADFVKAFI GF+V            F+ESFE+ DVK L GDHLSRAIGR+AGK G+TK
Sbjct: 132 KAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTK 191

Query: 642 FTIENVTKTRIVLADSKI 695
           FTIENVT+TRIVLAD K+
Sbjct: 192 FTIENVTRTRIVLADVKV 209


>AY830839-1|AAW52510.1| 2434|Homo sapiens serine/threonine protein
            kinase protein.
          Length = 2434

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 19/44 (43%), Positives = 27/44 (61%)
 Frame = +1

Query: 208  LGKAIQRSLEGTEKNIKKVQTLMRVKLQCEKLRSQLTDIHHLRK 339
            L + I    EGTEK+  + + L+R    CEKL S+L +I +LRK
Sbjct: 1464 LDRGISGKGEGTEKS-SQAKELLR----CEKLDSKLANIDYLRK 1502


>AB002301-1|BAA20762.1| 2137|Homo sapiens KIAA0303 protein.
          Length = 2137

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 19/44 (43%), Positives = 27/44 (61%)
 Frame = +1

Query: 208  LGKAIQRSLEGTEKNIKKVQTLMRVKLQCEKLRSQLTDIHHLRK 339
            L + I    EGTEK+  + + L+R    CEKL S+L +I +LRK
Sbjct: 1167 LDRGISGKGEGTEKS-SQAKELLR----CEKLDSKLANIDYLRK 1205


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,795,829
Number of Sequences: 237096
Number of extensions: 1573335
Number of successful extensions: 2734
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2734
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)