Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0605
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   1.9  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   2.5  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    23   2.5  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    23   2.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   4.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   4.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   7.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   7.6  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 282 VWAR*IRFKSS*IMVMR*IKIAFSYYVMILQLGCKR 175
           ++A+    KS   MVM  I  AFS Y ++  + CKR
Sbjct: 54  IYAKISETKSIVAMVMGTIVNAFSCYTVLAPVLCKR 89


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 598 DFYSRKLPS*INFLGKDLIV 539
           DFY +  P  +  +G+DL+V
Sbjct: 21  DFYYKTFPDAVPLIGEDLLV 40


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 101

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 598 DFYSRKLPS*INFLGKDLIV 539
           DFY +  P  +  +G+DL+V
Sbjct: 36  DFYYKTFPDAVPLIGEDLLV 55


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 598 DFYSRKLPS*INFLGKDLIV 539
           DFY +  P  +  +G+DL+V
Sbjct: 254 DFYYKTFPDAVPLIGEDLLV 273


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 598 DFYSRKLPS*INFLGKDLIV 539
           DFY +  P  +  +G+DL+V
Sbjct: 254 DFYYKTFPDAVPLIGEDLLV 273


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 598 DFYSRKLPS*INFLGKDLIV 539
           DFY +  P  +  +G+DL+V
Sbjct: 254 DFYYKTFPDAVPLIGEDLLV 273


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 437 RSRHVFRTCTLVV 475
           R+RH+FRT  L++
Sbjct: 124 RNRHIFRTSVLLI 136


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 437 RSRHVFRTCTLVV 475
           R+RH+FRT  L++
Sbjct: 124 RNRHIFRTSVLLI 136


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 489 FQLCVNGDLDTRIKC 533
           F +C+NGD   R  C
Sbjct: 195 FYVCINGDTPRRSGC 209


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 399 CEVCGRLRVLVLN*KAICGGYRCAETCRLVSIC 301
           C++CGR      N K   G +R     R++  C
Sbjct: 165 CKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQC 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,411
Number of Sequences: 336
Number of extensions: 3726
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)