Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0604
(578 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 25 0.41
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 25 0.71
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 24 0.94
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 24 0.94
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 24 0.94
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 3.8
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 5.0
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 6.7
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 6.7
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 6.7
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 6.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 8.8
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 8.8
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 25.4 bits (53), Expect = 0.41
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +3
Query: 159 SKLTKRSAGASPIVHNAAQVTEASHLLDVPPFDRHRSRIGAAADWLLGGKCHQQSRCPLG 338
S L S+ S A +TE H+ PP H S A L GG C + R G
Sbjct: 488 SPLGSVSSTESTCSGEVASLTEYHHV--APPSGHHASSAPLLAATLAGGLCPHRRRANSG 545
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 24.6 bits (51), Expect = 0.71
Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = -2
Query: 274 IRLLCRSKGGTS-SRWE 227
+RLLC GGTS S+WE
Sbjct: 77 LRLLCSIAGGTSESQWE 93
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 24.2 bits (50), Expect = 0.94
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 188 LPYRPQCCPSNR 223
+P+ P CCPS+R
Sbjct: 350 VPFCPDCCPSDR 361
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 24.2 bits (50), Expect = 0.94
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 188 LPYRPQCCPSNR 223
+P+ P CCPS+R
Sbjct: 350 VPFCPDCCPSDR 361
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 24.2 bits (50), Expect = 0.94
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 188 LPYRPQCCPSNR 223
+P+ P CCPS+R
Sbjct: 350 VPFCPDCCPSDR 361
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 380 VTLRITSSSTTINSKGDSKQPCL-APAVTTIL 472
V LRITS S TI+ CL +P + IL
Sbjct: 875 VALRITSMSVTISLSASVTIACLFSPKLYIIL 906
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +2
Query: 167 D*TVCRCLPYRPQCCPSNRSFPP 235
D + +P +P C + + FPP
Sbjct: 398 DAAIVMLVPSKPMCAEAFQEFPP 420
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 220 VTWAALWTIGEAPADRL 170
++W + W EA ADR+
Sbjct: 230 LSWVSFWLNREATADRV 246
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 6.7
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +1
Query: 484 KLCWKCIGNM 513
KLC +C+GN+
Sbjct: 543 KLCQQCVGNL 552
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 6.7
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +1
Query: 484 KLCWKCIGNM 513
KLC +C+GN+
Sbjct: 543 KLCQQCVGNL 552
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 6.7
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +1
Query: 484 KLCWKCIGNM 513
KLC +C+GN+
Sbjct: 543 KLCQQCVGNL 552
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.0 bits (42), Expect = 8.8
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 95 PDKSWQPPVVV 127
PDK W+P +V+
Sbjct: 105 PDKVWKPDIVL 115
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.0 bits (42), Expect = 8.8
Identities = 10/59 (16%), Positives = 20/59 (33%)
Frame = -2
Query: 286 AAAPIRLLCRSKGGTSSRWEASVTWAALWTIGEAPADRLVNLDQCGVPQRRFNYNNGWL 110
A P++ S+ + + W +W R +N C R ++ W+
Sbjct: 7 AFLPVKSFRESRCSVRCSAASGLRWFEIWRDSLPTKMRELNATACAALYERVEWSGPWI 65
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,219
Number of Sequences: 438
Number of extensions: 3961
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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