Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0602
(755 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125108-1|AAL75945.1| 96|Homo sapiens bithoraxoid-like protei... 132 1e-30
BC002481-1|AAH02481.1| 96|Homo sapiens dynein, light chain, ro... 119 1e-26
AY026513-1|AAK18712.1| 96|Homo sapiens dynein-associated prote... 119 1e-26
AL136173-3|CAI23309.1| 148|Homo sapiens dynein, light chain, ro... 119 1e-26
AL136173-2|CAI23308.1| 96|Homo sapiens dynein, light chain, ro... 119 1e-26
AL109923-4|CAI21457.1| 148|Homo sapiens dynein, light chain, ro... 119 1e-26
AL109923-3|CAI21456.1| 96|Homo sapiens dynein, light chain, ro... 119 1e-26
AF178431-1|AAK95342.1| 96|Homo sapiens BITH protein. 119 1e-26
AF165516-1|AAF86646.1| 96|Homo sapiens bithoraxoid-like protei... 119 1e-26
AF132750-1|AAL75951.1| 96|Homo sapiens bithoraxoid-like protei... 119 1e-26
BC054892-1|AAH54892.1| 54|Homo sapiens DYNLRB2 protein protein. 40 0.013
AL136173-1|CAM28343.1| 47|Homo sapiens dynein, light chain, ro... 40 0.013
AL109923-2|CAM28250.1| 47|Homo sapiens dynein, light chain, ro... 40 0.013
>AF125108-1|AAL75945.1| 96|Homo sapiens bithoraxoid-like protein
protein.
Length = 96
Score = 132 bits (320), Expect = 1e-30
Identities = 57/90 (63%), Positives = 81/90 (90%)
Frame = +3
Query: 6 VEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDST 185
VEET+KRIQ+HKGV+G ++VN EGIPI+++LDN+T+V YAGL+ LT KA++ VR++D
Sbjct: 4 VEETLKRIQSHKGVIGTMVVNAEGIPIRTTLDNSTTVQYAGLLHHLTMKAKSTVRDIDPQ 63
Query: 186 NELTFLRVRSRRHEILIAPDREFILIVIQN 275
N+LTFLR+RS++HEI++APD+E++LIVIQN
Sbjct: 64 NDLTFLRIRSKKHEIMVAPDKEYLLIVIQN 93
>BC002481-1|AAH02481.1| 96|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 96
Score = 119 bits (287), Expect = 1e-26
Identities = 51/93 (54%), Positives = 76/93 (81%)
Frame = +3
Query: 6 VEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDST 185
VEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KAR+ VR++D
Sbjct: 4 VEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDPQ 63
Query: 186 NELTFLRVRSRRHEILIAPDREFILIVIQNTSD 284
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 64 NDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>AY026513-1|AAK18712.1| 96|Homo sapiens dynein-associated protein
HKM23 protein.
Length = 96
Score = 119 bits (287), Expect = 1e-26
Identities = 51/93 (54%), Positives = 76/93 (81%)
Frame = +3
Query: 6 VEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDST 185
VEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KAR+ VR++D
Sbjct: 4 VEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDPQ 63
Query: 186 NELTFLRVRSRRHEILIAPDREFILIVIQNTSD 284
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 64 NDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>AL136173-3|CAI23309.1| 148|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 148
Score = 119 bits (287), Expect = 1e-26
Identities = 51/93 (54%), Positives = 76/93 (81%)
Frame = +3
Query: 6 VEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDST 185
VEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KAR+ VR++D
Sbjct: 56 VEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDPQ 115
Query: 186 NELTFLRVRSRRHEILIAPDREFILIVIQNTSD 284
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 116 NDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 148
>AL136173-2|CAI23308.1| 96|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 96
Score = 119 bits (287), Expect = 1e-26
Identities = 51/93 (54%), Positives = 76/93 (81%)
Frame = +3
Query: 6 VEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDST 185
VEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KAR+ VR++D
Sbjct: 4 VEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDPQ 63
Query: 186 NELTFLRVRSRRHEILIAPDREFILIVIQNTSD 284
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 64 NDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>AL109923-4|CAI21457.1| 148|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 148
Score = 119 bits (287), Expect = 1e-26
Identities = 51/93 (54%), Positives = 76/93 (81%)
Frame = +3
Query: 6 VEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDST 185
VEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KAR+ VR++D
Sbjct: 56 VEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDPQ 115
Query: 186 NELTFLRVRSRRHEILIAPDREFILIVIQNTSD 284
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 116 NDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 148
>AL109923-3|CAI21456.1| 96|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 96
Score = 119 bits (287), Expect = 1e-26
Identities = 51/93 (54%), Positives = 76/93 (81%)
Frame = +3
Query: 6 VEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDST 185
VEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KAR+ VR++D
Sbjct: 4 VEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDPQ 63
Query: 186 NELTFLRVRSRRHEILIAPDREFILIVIQNTSD 284
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 64 NDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>AF178431-1|AAK95342.1| 96|Homo sapiens BITH protein.
Length = 96
Score = 119 bits (287), Expect = 1e-26
Identities = 51/93 (54%), Positives = 76/93 (81%)
Frame = +3
Query: 6 VEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDST 185
VEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KAR+ VR++D
Sbjct: 4 VEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDPQ 63
Query: 186 NELTFLRVRSRRHEILIAPDREFILIVIQNTSD 284
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 64 NDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>AF165516-1|AAF86646.1| 96|Homo sapiens bithoraxoid-like protein
protein.
Length = 96
Score = 119 bits (287), Expect = 1e-26
Identities = 51/93 (54%), Positives = 76/93 (81%)
Frame = +3
Query: 6 VEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDST 185
VEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KAR+ VR++D
Sbjct: 4 VEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDPQ 63
Query: 186 NELTFLRVRSRRHEILIAPDREFILIVIQNTSD 284
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 64 NDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>AF132750-1|AAL75951.1| 96|Homo sapiens bithoraxoid-like protein
protein.
Length = 96
Score = 119 bits (287), Expect = 1e-26
Identities = 51/93 (54%), Positives = 76/93 (81%)
Frame = +3
Query: 6 VEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDST 185
VEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KAR+ VR++D
Sbjct: 4 VEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDPQ 63
Query: 186 NELTFLRVRSRRHEILIAPDREFILIVIQNTSD 284
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 64 NDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>BC054892-1|AAH54892.1| 54|Homo sapiens DYNLRB2 protein protein.
Length = 54
Score = 39.5 bits (88), Expect = 0.013
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3
Query: 6 VEETIKRIQAHKGVMGVVIVNHE 74
VEET+KRIQ+HKGV+G ++VN E
Sbjct: 4 VEETLKRIQSHKGVIGTMVVNAE 26
>AL136173-1|CAM28343.1| 47|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 47
Score = 39.5 bits (88), Expect = 0.013
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +3
Query: 6 VEETIKRIQAHKGVMGVVIVNHEG 77
VEET+KR+Q+ KGV G+++VN EG
Sbjct: 4 VEETLKRLQSQKGVQGIIVVNTEG 27
>AL109923-2|CAM28250.1| 47|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 47
Score = 39.5 bits (88), Expect = 0.013
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +3
Query: 6 VEETIKRIQAHKGVMGVVIVNHEG 77
VEET+KR+Q+ KGV G+++VN EG
Sbjct: 4 VEETLKRLQSQKGVQGIIVVNTEG 27
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,470,265
Number of Sequences: 237096
Number of extensions: 2064851
Number of successful extensions: 3057
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3057
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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