Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0601
(363 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY017417-1|AAG54081.1| 383|Anopheles gambiae arrestin protein. 182 3e-48
AJ304409-1|CAC39103.2| 383|Anopheles gambiae arrestin protein. 182 3e-48
Y17705-1|CAA76825.1| 124|Anopheles gambiae opsin protein. 26 0.50
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 23 2.7
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 23 2.7
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 23 2.7
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 22 6.2
AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakini... 22 6.2
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 22 6.2
>AY017417-1|AAG54081.1| 383|Anopheles gambiae arrestin protein.
Length = 383
Score = 182 bits (444), Expect = 3e-48
Identities = 83/108 (76%), Positives = 96/108 (88%), Gaps = 1/108 (0%)
Frame = +1
Query: 43 MVYNFKVFKKCAPNGKLTLYVAKRDFVDHITTVEPIDGVVLLDEEYVR-GRKVFGQVVCT 219
MVYNFKVFKKCAPNGK+TLY+ KRDFVDH++ VEPIDG+V+LD+EY+R RKVFGQ+VC+
Sbjct: 1 MVYNFKVFKKCAPNGKVTLYMGKRDFVDHVSGVEPIDGIVVLDDEYIRDNRKVFGQIVCS 60
Query: 220 FRYGREEDEVMGLNFYKELFLASKQIYPAPEKRSYELTRTQERLMKKL 363
FRYGREEDEVMGLNF KEL LAS+QIYP PEK E T+ QERL+KKL
Sbjct: 61 FRYGREEDEVMGLNFQKELCLASEQIYPRPEKSDKEQTKLQERLLKKL 108
>AJ304409-1|CAC39103.2| 383|Anopheles gambiae arrestin protein.
Length = 383
Score = 182 bits (444), Expect = 3e-48
Identities = 83/108 (76%), Positives = 96/108 (88%), Gaps = 1/108 (0%)
Frame = +1
Query: 43 MVYNFKVFKKCAPNGKLTLYVAKRDFVDHITTVEPIDGVVLLDEEYVR-GRKVFGQVVCT 219
MVYNFKVFKKCAPNGK+TLY+ KRDFVDH++ VEPIDG+V+LD+EY+R RKVFGQ+VC+
Sbjct: 1 MVYNFKVFKKCAPNGKVTLYMGKRDFVDHVSGVEPIDGIVVLDDEYIRDNRKVFGQIVCS 60
Query: 220 FRYGREEDEVMGLNFYKELFLASKQIYPAPEKRSYELTRTQERLMKKL 363
FRYGREEDEVMGLNF KEL LAS+QIYP PEK E T+ QERL+KKL
Sbjct: 61 FRYGREEDEVMGLNFQKELCLASEQIYPRPEKSDKEQTKLQERLLKKL 108
>Y17705-1|CAA76825.1| 124|Anopheles gambiae opsin protein.
Length = 124
Score = 25.8 bits (54), Expect = 0.50
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 252 HHLILLAPVAKRA-HHLTEHLAPADVLLVQQHHA 154
HHL L +A A HHL HL P + ++ HA
Sbjct: 10 HHLRHLRVLAAAADHHLLVHLHPEGCVRSREEHA 43
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.4 bits (48), Expect = 2.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 173 RSTSAGARCSVRWCARFATGARR 241
RS+ AG S RW ATG R+
Sbjct: 106 RSSDAGGEPSRRWTRSGATGRRQ 128
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.4 bits (48), Expect = 2.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 173 RSTSAGARCSVRWCARFATGARR 241
RS+ AG S RW ATG R+
Sbjct: 106 RSSDAGGEPSRRWTRSGATGRRQ 128
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 23.4 bits (48), Expect = 2.7
Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = -1
Query: 270 LVEVEPHHLILLAPVAKRAHHLTEHLAPADVLLVQQHHAVDRLHRRDVV--HEVPLGDVQ 97
+V EP + + PV K AP VQ HHA H + H P+
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAHATVQHHHAAPIAHYSAPIAHHAAPIAHYA 198
Query: 96 RQLAVGRALLEH 61
+A A + H
Sbjct: 199 APIAHHAAPIAH 210
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 22.2 bits (45), Expect = 6.2
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = -1
Query: 234 APVAKRAHHLTEHLAPADVLLVQQHHAVDRLHRRDVVHEVPLGDVQRQLAVGRAL 70
A A HH H AP HH++ + H + GD + +AV AL
Sbjct: 716 AAAATGHHHHQHHAAP-------HHHSLQQQHASSAFNSA--GDARSGVAVAAAL 761
>AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakinin
GPCR protein.
Length = 634
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 114 PLGDVQRQLAVGRA 73
PLG VQR L VGR+
Sbjct: 242 PLGYVQRLLPVGRS 255
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 22.2 bits (45), Expect = 6.2
Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = -1
Query: 228 VAKRAHHLTEHLAPADVLLVQQHHAVDRLHRRDVV--HEVPLGDVQRQLAVGRALLEH 61
+A+ H + AP VQ HHA H + H P+ +A A + H
Sbjct: 157 IAQNVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAHHAAPIAH 214
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 300,144
Number of Sequences: 2352
Number of extensions: 5233
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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