Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0597
(639 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0135 + 1042889-1044255,1045368-1045809 34 0.11
11_01_0133 + 1121392-1122731,1123417-1123858 33 0.14
09_06_0110 + 20923523-20924065 33 0.19
11_06_0610 - 25449085-25453284 31 0.77
07_03_1636 + 28290642-28291574 31 0.77
01_01_0070 - 542603-542686,542803-543441 31 0.77
07_01_1204 - 11469953-11470618 31 1.0
06_03_0455 + 20978658-20978677,20979104-20979608 31 1.0
09_02_0322 - 7240125-7241568,7242043-7243253,7245782-7246144,724... 30 1.8
06_03_1146 - 28004896-28005554,28005664-28005844 30 1.8
05_04_0406 + 21022469-21022918 30 1.8
12_02_1174 - 26696869-26698191 29 2.4
10_01_0352 - 3870921-3871272,3871383-3871479,3871541-3871621,387... 29 2.4
05_04_0337 - 20372378-20373094,20373320-20373379,20373992-203742... 29 2.4
07_03_0544 + 19309026-19310105 29 3.1
01_02_0020 - 10269252-10269314,10269442-10269483,10269759-102702... 29 3.1
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 29 4.1
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 29 4.1
10_08_0565 + 18827298-18827361,18827473-18827784,18827886-188287... 29 4.1
09_02_0081 - 4041364-4041555,4041830-4041911,4042192-4042443,404... 29 4.1
06_01_0008 + 141405-142421 29 4.1
08_01_0840 - 8213932-8214414 28 5.4
05_05_0077 + 22226326-22226441,22226527-22226601,22227619-222277... 28 5.4
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 28 5.4
03_05_1006 + 29635372-29635442,29635544-29635589,29635672-296358... 28 5.4
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 28 5.4
12_02_0197 + 15392427-15392617,15392743-15393271 28 7.2
10_07_0154 + 13487971-13488168,13488259-13488483,13488592-134904... 28 7.2
09_02_0601 + 11112201-11112386,11112471-11114080,11114345-111145... 28 7.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 7.2
07_03_1432 - 26508135-26508881,26509301-26509708 28 7.2
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 28 7.2
04_04_1540 - 34245246-34245797,34246904-34247157,34247989-34248577 28 7.2
02_05_0819 - 32014236-32016059 28 7.2
02_04_0536 + 23730396-23731736 28 7.2
01_06_1568 - 38299113-38299790,38300165-38300254,38300368-383004... 28 7.2
12_02_0773 - 23033900-23034595 27 9.5
12_02_0320 - 17504511-17505016,17505757-17506147 27 9.5
08_02_1050 + 23949828-23949981,23950083-23950534,23951599-239516... 27 9.5
08_02_0551 - 18535219-18536134,18536140-18536345 27 9.5
08_02_0549 - 18501764-18502888 27 9.5
06_03_0751 - 24148422-24149072,24149148-24150083 27 9.5
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 27 9.5
>12_01_0135 + 1042889-1044255,1045368-1045809
Length = 602
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAP------VRALPHAPPRTPGAHARTPAAQRAIPNR 508
PPP H + +P ++AP V ALP PP P R P Q PN+
Sbjct: 137 PPPPPSHPALLPPDATAPPPPPTSVAALPPPPPAQPDKRRREPQCQEQEPNQ 188
>11_01_0133 + 1121392-1122731,1123417-1123858
Length = 593
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAP------VRALPHAPPRTPGAHARTPAAQRAIPNR 508
PPP H + +P ++AP V ALP PP P R P Q PN+
Sbjct: 136 PPPPPSHPALLPPDATAPPPPPTSVAALPPPPPPQPDKRRREPQCQEQEPNQ 187
>09_06_0110 + 20923523-20924065
Length = 180
Score = 33.1 bits (72), Expect = 0.19
Identities = 23/71 (32%), Positives = 31/71 (43%)
Frame = +2
Query: 368 YPPPVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLSTAPCFL 547
+ PP + + P P+ A PHAPP P HA PA QR ++ H +TA
Sbjct: 30 HQPPFPQPPATPPQPPLLPLPARPHAPP--PQQHAAWPAPQR---SKKPSHATATAAAAA 84
Query: 548 CVFVPIEGAAV 580
P + A V
Sbjct: 85 AALGPKKTAPV 95
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.1 bits (67), Expect = 0.77
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 368 YPPPVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTP 481
Y PP S P S P H+PP P H +P
Sbjct: 539 YSPPATPESSPPPEGKSPPTPTASHSPPPVPEGHTPSP 576
>07_03_1636 + 28290642-28291574
Length = 310
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLSTAP 538
PPP + + S P + P PP+T P A A P+R G H + AP
Sbjct: 170 PPPPDAYLRKPSPPSPPPAKLSPPPPPQTQTQPLAKPPAP-ATPSRAGGHVAALAP 224
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 31.1 bits (67), Expect = 0.77
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLSTAPCFL 547
PPPV P S P P PP TP A A A+P T ++ AP L
Sbjct: 97 PPPVTPPPVTPPPVSPPPATPPPALPPSTPPPVAAPAEAPAALPPATTPPPVAEAPAEL 155
>07_01_1204 - 11469953-11470618
Length = 221
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -1
Query: 486 AAGVRAWAPGVRGGAW---GSARTGAEEAPGTL 397
A G+R P + GGAW GS R G E GTL
Sbjct: 27 AVGIRLCRPVLSGGAWYQQGSGRAGTEGIGGTL 59
>06_03_0455 + 20978658-20978677,20979104-20979608
Length = 174
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -1
Query: 516 MPVRLGMARWAAGVRAWAPGVRGGAWGSARTGAEEAP 406
MPVR AG R G GG WG GAEE P
Sbjct: 1 MPVR---CNGQAGARLRTAGGGGGGWGLGAAGAEERP 34
>09_02_0322 - 7240125-7241568,7242043-7243253,7245782-7246144,
7246502-7246522
Length = 1012
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 389 HDSRVPGAS-SAPVR-ALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLSTAP 538
H S +P +S S PV+ +LP APP P Q ++P I AP
Sbjct: 860 HSSMMPHSSGSIPVQNSLPPAPPSASQLQVHAPPVQGSVPPNPSIMHTPNAP 911
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 404 PGASSAPVR-ALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLSTAPCFLCVFVPIEGAAV 580
P S+ P A P PP T GA+A TPAA A +R+G + AP V V GA +
Sbjct: 216 PSPSTTPGGVAQPPPPPGTDGANATTPAAP-AANDRSG--AAAAAPVVAGVVVTSLGAYI 272
>05_04_0406 + 21022469-21022918
Length = 149
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -1
Query: 471 AWAPGVRGGAWGSARTGAEEAPGTLESWRPTGGG 370
AW V G A G AR +AP + W G G
Sbjct: 6 AWRTSVHGAADGWARRATRKAPSAAKEWGHRGAG 39
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTPAAQRAIPN 505
PPP R PG + A V P PP P A + P P+
Sbjct: 222 PPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPS 266
>10_01_0352 -
3870921-3871272,3871383-3871479,3871541-3871621,
3874854-3875028,3875650-3875661
Length = 238
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Frame = -1
Query: 594 VGSSETAAPSIGTNTHRKHGAVERVCMPVRLGMARWAAGVRAWAPGVR----GGAWGSAR 427
VG + AA G R A+ R VRL R A+ AW PG R + GSA
Sbjct: 156 VGDATRAAVLGGRGNDRTAVALGRRRSLVRLRRWRGASSTHAWRPGARRRMGAASGGSAA 215
Query: 426 TGAE--EAPGTLESWRP 382
G E + G +E P
Sbjct: 216 LGKEGRDVGGQIEDLLP 232
>05_04_0337 -
20372378-20373094,20373320-20373379,20373992-20374266,
20374358-20374619
Length = 437
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +2
Query: 257 RP*PSQDNTT--KRHQMISASLPGEAXXXXXXXXXXXXXYPPPVGRHDSRVPGASSAPVR 430
RP PS +TT ++H L GE PPP S S+A
Sbjct: 257 RPSPSSSSTTTAQQHTSFHQLLQGECSAAAAAP-------PPPPSLPASATTRNSNASQL 309
Query: 431 ALPHAPPRTPGAHARTPAA 487
+P PPR P A A T AA
Sbjct: 310 LMPPPPPRPPCAAAYTSAA 328
>07_03_0544 + 19309026-19310105
Length = 359
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -3
Query: 316 QARRNHLMTFRGIVLRRSRAQHRRPWITTTAVSGGLIRGKVYRSLLTGSV 167
Q++ +HL+ G ++ Q +PW+ +GGL+ G Y LL+GS+
Sbjct: 205 QSQVDHLLGL-GYGAAGAQIQAAKPWLHDGGATGGLLDG-FYAPLLSGSI 252
>01_02_0020 -
10269252-10269314,10269442-10269483,10269759-10270244,
10270338-10270421,10270491-10270556,10270718-10270810,
10270901-10271987,10273338-10273362,10273881-10273899
Length = 654
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 459 GVRGGAWGSARTGAEEAPGTLESWRPTGGGY 367
G GG GS+ E PG ++++ GGG+
Sbjct: 52 GTGGGGGGSSSRAQERQPGGIDAFAKVGGGF 82
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/52 (36%), Positives = 21/52 (40%)
Frame = +2
Query: 449 PRTPGAHARTPAAQRAIPNRTGIHTLSTAPCFLCVFVPIEGAAVSELPTPSV 604
P PGAH P A P GI ST P F I +A S P S+
Sbjct: 513 PPMPGAHFPCPMIPGASPQGLGIPGTSTMPMFGVPGQTIPSSASSVPPFASL 564
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAPVRALPHAPP------RTPGAHARTPAA 487
PP + D RVP SS LP PP PGA+ PA+
Sbjct: 359 PPAADKKDDRVPLPSSNGAPLLPSYPPLGYGIMSVPGAYGAAPAS 403
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAPVRALPHAPP------RTPGAHARTPAA 487
PP + D RVP SS LP PP PGA+ PA+
Sbjct: 767 PPAADKKDDRVPLPSSNGAPLLPSYPPLGYGIMSVPGAYGAAPAS 811
>10_08_0565 +
18827298-18827361,18827473-18827784,18827886-18828758,
18828870-18828946,18829090-18829119,18829654-18829731
Length = 477
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1
Query: 462 PGVRGGAWGSARTGAEEAPGTLESWRPTGGG 370
PGV GGA GS +A TL S P GG
Sbjct: 291 PGVAGGAAGSQSQDDVDASTTLASGEPATGG 321
>09_02_0081 -
4041364-4041555,4041830-4041911,4042192-4042443,
4042529-4044001,4044222-4044733,4044824-4045021
Length = 902
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +2
Query: 374 PPVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLSTAP 538
PP RH R P +P + P P+ A +P Q A P + T P
Sbjct: 502 PPSPRHPPRQPTPPPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTP 556
>06_01_0008 + 141405-142421
Length = 338
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 519 TPFLPHHASYAYLYRSRAQQSPNYQHRPYSSGFVPPSPAP 638
+PFLPHH + + S ++P+ ++ F PPSP+P
Sbjct: 58 SPFLPHHPFFPFASPSFDLRNPS----DLAAFFGPPSPSP 93
>08_01_0840 - 8213932-8214414
Length = 160
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 7/58 (12%)
Frame = -1
Query: 522 VCMPVRLGMA-RWAAGVRAWAPGVRGG-----AWGSAR-TGAEEAPGTLESWRPTGGG 370
VC R + RW A VR W P G +WG G E G + GGG
Sbjct: 65 VCAAARTAVVGRWEAEVRRWRPEAAGPVPSRVSWGRLEVVGRAEGSGKTSAREALGGG 122
>05_05_0077 +
22226326-22226441,22226527-22226601,22227619-22227781,
22227867-22228166
Length = 217
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 522 PFLPHHA---SYAYLYRSRAQQSPNYQHRPYSSGFVPPS 629
PF+PHHA + A Y A ++ PY++ + PP+
Sbjct: 155 PFVPHHAAAVAAAPAYHPAAFAQAGGKYVPYATSYAPPA 193
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 516 YTPFLPHHASYAYLYRSRAQQSPNYQHRPYSSGFVPPSPA 635
Y+P P + SY+ S + SP+Y + P S + P SP+
Sbjct: 1713 YSPTSPSY-SYSPTSPSYSPTSPSYNYSPTSPSYSPTSPS 1751
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 516 YTPFLPHHASYAYLYRSRAQQSPNYQHRPYSSGFVPPSPA 635
Y P P + SY+ S + SP+Y + P S + P SP+
Sbjct: 1697 YNPTSPSY-SYSPTSPSYSPTSPSYSYSPTSPSYSPTSPS 1735
>03_05_1006 +
29635372-29635442,29635544-29635589,29635672-29635813,
29635878-29636653,29636750-29637370
Length = 551
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 374 PPVGRHDSRVPGASSAPVRALPHAPPRTPG 463
PPV + P A +AP A P APP G
Sbjct: 494 PPVRKTSVPAPPAEAAPAVATPAAPPAAEG 523
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/67 (29%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = +2
Query: 299 MISASLPGEAXXXXXXXXXXXXXYPPPVGRHDSRVPGASS-APVRALPHAPPRTPGAHAR 475
M S S P A PPP + S P S +P P A P P
Sbjct: 1 MSSPSSPPPANQTATPPPANQTAAPPPASNNSSSPPAPGSLSPPSLTPPAAPSPPSTTPS 60
Query: 476 TPAAQRA 496
+PAA A
Sbjct: 61 SPAAAAA 67
>12_02_0197 + 15392427-15392617,15392743-15393271
Length = 239
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 506 GWEWRAGRRGCGHGLPGC 453
GW WR G CG+G GC
Sbjct: 69 GWLWRRGCGCCGYGGGGC 86
>10_07_0154 +
13487971-13488168,13488259-13488483,13488592-13490492,
13490578-13490829,13491110-13491191,13491466-13491657
Length = 949
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLSTAP 538
PPP+ R R P +P + P P+ A +PA Q A P + + T P
Sbjct: 549 PPPL-RSPPRQPTPPPSPSQQPPLPAPQPVQASPTSPAKQHAPPAPSSVQTSPPTP 603
>09_02_0601 +
11112201-11112386,11112471-11114080,11114345-11114579,
11115233-11115358
Length = 718
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLSTAP 538
PPP+ R R P +P + P P+ A +PA Q A P + + T P
Sbjct: 428 PPPL-RSPPRQPTPPPSPSQQPPLLAPQPVQASPTSPAKQHAPPAPSSVQTSPPTP 482
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTP--AAQRAIP 502
PPP G + S+ P P P APP P + P AQ A P
Sbjct: 96 PPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPP 141
>07_03_1432 - 26508135-26508881,26509301-26509708
Length = 384
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 368 YPPPVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLS 529
YPPP S P + S P LP +P TP + A + ++ R G ++ S
Sbjct: 48 YPPPSSTPPSLAPVSPSPPTTYLPPSP--TPPSPAPASPSPPSLGLRVGYYSSS 99
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLSTAPC 541
P P R S P SS+ P PP P A RT ++ + P T ++ PC
Sbjct: 318 PMPRSRSASPSPSTSSSGSAGPPAPPPPPPPAAKRT--SRTSTPATTSSSAPASGPC 372
>04_04_1540 - 34245246-34245797,34246904-34247157,34247989-34248577
Length = 464
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +2
Query: 392 DSRVPGASSAPVRALPHAPPRTPGAHARTP 481
DSR+P ASS P H PPR P AH+ P
Sbjct: 72 DSRIP-ASSDP----DHPPPRPPRAHSPYP 96
>02_05_0819 - 32014236-32016059
Length = 607
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 374 PPVGRHDSRVPGASSAPVRALPHAPPR 454
PP +H RVP AS +P + H+PPR
Sbjct: 225 PPKFKH-KRVPRASGSPPVPVMHSPPR 250
>02_04_0536 + 23730396-23731736
Length = 446
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAPVRALP--HAPPRTPG 463
PPP G VPG + PV A P H PP PG
Sbjct: 96 PPPPGFPPLPVPGLADEPVYAAPARHLPP-PPG 127
>01_06_1568 -
38299113-38299790,38300165-38300254,38300368-38300484,
38300600-38300962
Length = 415
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +2
Query: 422 PVRALPHAPPRTPGAHA-RTPAAQR--AIPNRTG 514
P LP APP TP A A R AA+R A+P G
Sbjct: 273 PRPRLPAAPPATPAADAERADAARRGDAVPEAAG 306
>12_02_0773 - 23033900-23034595
Length = 231
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 374 PPVGRHDSRVPGASSAPVRALPHAPPRTPGAHAR 475
P G+ PG S AP + L APP TP A+
Sbjct: 32 PRNGKAAPGKPGMSPAPPKKLTPAPPTTPPPKAK 65
>12_02_0320 - 17504511-17505016,17505757-17506147
Length = 298
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTPAAQR 493
PPP + + P A+ R + PP PGAH A R
Sbjct: 33 PPPPPQQQQQQPEAAKWGTRQM--GPPAAPGAHPENQQAAR 71
>08_02_1050 +
23949828-23949981,23950083-23950534,23951599-23951631,
23952069-23952179,23953175-23953348
Length = 307
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +2
Query: 377 PVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLSTAPCFLCVF 556
P S P S AP R P PP A R A+ A P + + L +A LC+
Sbjct: 23 PPSPSPSPSPLLSRAPSRRWP--PPLRASASGRGGASAAAAPTSSALDALLSAAELLCLA 80
Query: 557 VP 562
P
Sbjct: 81 PP 82
>08_02_0551 - 18535219-18536134,18536140-18536345
Length = 373
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -3
Query: 247 RPWITTTAVSGGLIRGKVYRSLLTGSVRSNTEGKVHGCDGRFCL 116
RP + GG VYRS G ++ GK G DGR L
Sbjct: 316 RPCVPVVVGGGGARAAAVYRSTTAGEFLAHYNGK--GLDGRSAL 357
>08_02_0549 - 18501764-18502888
Length = 374
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 247 RPWITTTAVSGGLIRGKVYRSLLTGSVRSNTEGKVHGCDGRFCL 116
RP++ GG VYR G ++ GK G DGR L
Sbjct: 317 RPYVPVVVGGGGARAAAVYRGTTAGEFLAHFNGK--GLDGRSAL 358
>06_03_0751 - 24148422-24149072,24149148-24150083
Length = 528
Score = 27.5 bits (58), Expect = 9.5
Identities = 24/74 (32%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = -1
Query: 597 GVGSSETAAPSIGTNTHR-KHGAVERVCMPVRLGMARWAAGVRAWAPGVRGGAWGSARTG 421
G G TAA G + H G+ R+C L M A + A G A
Sbjct: 434 GGGGGGTAADVRGQHFHLLPFGSGRRICPGASLAMLVVQAALAAMVQCFEWSPVGGAPVD 493
Query: 420 AEEAPG-TLESWRP 382
EE PG TL RP
Sbjct: 494 MEEGPGLTLPRKRP 507
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 371 PPPVGRHDSRVPGASSAPVRALPHAPPRTPGAHARTPAAQRAIPNRTG 514
PPP R V G + P P PP PG P R +P G
Sbjct: 1185 PPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGG-RGLPAPPG 1231
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,560,429
Number of Sequences: 37544
Number of extensions: 416451
Number of successful extensions: 2016
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2010
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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