Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0597
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    26   0.88 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    26   0.88 
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          26   1.2  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    25   2.0  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    24   4.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   4.7  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   6.2  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    23   8.2  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    23   8.2  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 413  SSAPVRALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLS 529
            S+   R+LP  PP  P A  R P A  + P+    H LS
Sbjct: 1359 STPGARSLPLTPPSVPYASDRPPVATFSCPDGLA-HALS 1396


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 413  SSAPVRALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLS 529
            S+   R+LP  PP  P A  R P A  + P+    H LS
Sbjct: 1356 STPGARSLPLTPPSVPYASDRPPVATFSCPDGLA-HALS 1393


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 389 HDSRVPGASSAPVRALPHAPPRTP-GAHARTPAAQR 493
           + S  PG ++ P    P A   TP G  AR P+AQ+
Sbjct: 526 YQSASPGVATVPDGGSPGATLATPGGTKARPPSAQQ 561


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 20/53 (37%), Positives = 21/53 (39%)
 Frame = +2

Query: 380 VGRHDSRVPGASSAPVRALPHAPPRTPGAHARTPAAQRAIPNRTGIHTLSTAP 538
           V  HD R   ASS    A+P AP  T    A   AA  A    T      TAP
Sbjct: 169 VSAHDRRFDDASSP---AVPAAPVATAALAATAFAATNAASVATAAPAAITAP 218


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 457 PGSPCPHPRRP 489
           PG P PHP RP
Sbjct: 332 PGEPYPHPCRP 342


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 513  PVRLGMARWAAGVRAWAPG 457
            PVR GMAR+A  +   APG
Sbjct: 1075 PVREGMARFALLLEVCAPG 1093


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 440 HAPPRTPGAH 469
           HAPP  PGAH
Sbjct: 224 HAPPSHPGAH 233


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 278 CLETVTGAASQAVDHYNGGKRRSHPRKS 195
           C   V G A   V+H +GG    H  K+
Sbjct: 195 CWPKVRGVAMNPVEHPHGGGNHQHIGKA 222


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 457 PGSPCPHPRRPARHSQPYR 513
           P +P P PRR  +H +  R
Sbjct: 84  PTTPTPQPRRMQQHQEKQR 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,619
Number of Sequences: 2352
Number of extensions: 13323
Number of successful extensions: 26
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)