Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0596
(726 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16VU4 Cluster: Mitochondrial ribosomal protein, L10, p... 154 2e-36
UniRef50_Q9VPL3 Cluster: 39S ribosomal protein L10, mitochondria... 134 2e-30
UniRef50_UPI0000D56178 Cluster: PREDICTED: similar to CG11488-PA... 134 3e-30
UniRef50_Q56FJ7 Cluster: Mitochondrial ribosomal protein L10; n=... 124 3e-27
UniRef50_UPI00015B5309 Cluster: PREDICTED: similar to ENSANGP000... 112 1e-23
UniRef50_UPI0000DB7731 Cluster: PREDICTED: similar to Amyotrophi... 89 8e-17
UniRef50_UPI0000ECBDE1 Cluster: 39S ribosomal protein L10, mitoc... 60 7e-08
UniRef50_Q3KQE8 Cluster: LOC446962 protein; n=3; Xenopus|Rep: LO... 43 0.009
UniRef50_Q24IL0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q5DAM1 Cluster: SJCHGC09520 protein; n=1; Schistosoma j... 33 5.4
UniRef50_Q7VQT3 Cluster: Ornithine carbamoyltransferase; n=232; ... 33 5.4
UniRef50_Q9PYY8 Cluster: ORF55; n=2; Granulovirus|Rep: ORF55 - X... 33 7.2
UniRef50_A5N491 Cluster: Transcriptional regulator; n=1; Clostri... 33 7.2
UniRef50_A0DT30 Cluster: Chromosome undetermined scaffold_62, wh... 33 7.2
>UniRef50_Q16VU4 Cluster: Mitochondrial ribosomal protein, L10,
putative; n=2; Culicidae|Rep: Mitochondrial ribosomal
protein, L10, putative - Aedes aegypti (Yellowfever
mosquito)
Length = 256
Score = 154 bits (373), Expect = 2e-36
Identities = 80/188 (42%), Positives = 117/188 (62%), Gaps = 2/188 (1%)
Frame = +2
Query: 140 LKKILLEPRACLVTAKRFRGKINIQRPRLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDR 319
++K LL+ R LV KRFRGKINIQRPR PH+ER +LDL KP Y ++ P C+
Sbjct: 5 VQKTLLQSRLPLVCFKRFRGKINIQRPRQPHYERARVLDLVKPVYKQLEFNAP----CED 60
Query: 320 GEK-KNKTEIDNPFERILARECLEWFNTSKMIVFLHVNPITMEDKTPVYAALNKNKMYLR 496
E+ K E+DNP+ERI+ARE W + SKM+ F+H+N I ED V AL++++M ++
Sbjct: 61 VERSKVAQEVDNPYERIIAREVRNWLDHSKMVAFIHLNSIKQEDFFKVQVALHRHQMNVK 120
Query: 497 TYGKKIVSLATKGTRYEVVNELFTSHQNIIFGQPENAAK-MFKILKKAPQFGCHGLGVVQ 673
YGK ++ A +GT++E + LF +IF E+ + + +LKK PQF G++
Sbjct: 121 VYGKSVIRQAVEGTKFETIQPLFDVKTALIFCPDESKIRQLLNVLKKTPQFVLLA-GIIH 179
Query: 674 DRLLSKNE 697
+ L+KNE
Sbjct: 180 GQFLNKNE 187
>UniRef50_Q9VPL3 Cluster: 39S ribosomal protein L10, mitochondrial
precursor; n=2; Sophophora|Rep: 39S ribosomal protein
L10, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 248
Score = 134 bits (325), Expect = 2e-30
Identities = 66/172 (38%), Positives = 107/172 (62%), Gaps = 1/172 (0%)
Frame = +2
Query: 188 RFRGKINIQRPRLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERI 367
RFRGKINIQRP+ PH+ER ++ +++PKY P+ R E+ + + +NP+ I
Sbjct: 23 RFRGKINIQRPKAPHYERARVVAVTQPKY--PELPKAKSCFKTRAERTQQQQ-ENPYNEI 79
Query: 368 LARECLEWFNTSKMIVFLHVNPITMEDKTPVYAALNKNKMYLRTYGKKIVSLATKGTRYE 547
+ARE W + S+++ F H++ IT +D V L+K ++L++YG KI+ A K TRYE
Sbjct: 80 IAREVRNWLDHSRLVAFFHLSSITADDIFRVRVQLHKQNLHLKSYGSKIIEQAVKNTRYE 139
Query: 548 VVNELFTSHQNIIFG-QPENAAKMFKILKKAPQFGCHGLGVVQDRLLSKNEL 700
+ LF S+ I+F PE A + +I+++ PQ G G+V++ +LS+N+L
Sbjct: 140 AIVPLFHSNHCIVFSPDPEKTAALLRIVRRVPQMVLLG-GIVEETMLSRNQL 190
>UniRef50_UPI0000D56178 Cluster: PREDICTED: similar to CG11488-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG11488-PA - Tribolium castaneum
Length = 240
Score = 134 bits (323), Expect = 3e-30
Identities = 67/191 (35%), Positives = 106/191 (55%)
Frame = +2
Query: 152 LLEPRACLVTAKRFRGKINIQRPRLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKK 331
L E + LV AKRFRGKINIQRP+ H ER +++ L+ P + K LC + + K
Sbjct: 9 LFERLSPLVQAKRFRGKINIQRPKPVHRERSIMMTLTNPFFISTKKGKTPIDLCTKSQDK 68
Query: 332 NKTEIDNPFERILARECLEWFNTSKMIVFLHVNPITMEDKTPVYAALNKNKMYLRTYGKK 511
+ NP+++I+A E WFNTS++I F H+NP+ + + YA K+ M + YGKK
Sbjct: 69 IVKDEHNPYQQIIAGELRMWFNTSRLIAFYHLNPMKSDQRFKAYAMFKKSDMLFKQYGKK 128
Query: 512 IVSLATKGTRYEVVNELFTSHQNIIFGQPENAAKMFKILKKAPQFGCHGLGVVQDRLLSK 691
+ +A K T++E V + + S ++F K+ KI K+ PQ + + + +SK
Sbjct: 129 TLEIAVKDTKFEPVLDFYVSQNIMVFSPQPEVKKLLKITKRFPQLVLLA-AIFEGKFVSK 187
Query: 692 NELFRVQPTSN 724
+EL ++ N
Sbjct: 188 DELIELEKIPN 198
>UniRef50_Q56FJ7 Cluster: Mitochondrial ribosomal protein L10; n=1;
Lysiphlebus testaceipes|Rep: Mitochondrial ribosomal
protein L10 - Lysiphlebus testaceipes (Greenbugs aphid
parastoid)
Length = 173
Score = 124 bits (298), Expect = 3e-27
Identities = 66/160 (41%), Positives = 90/160 (56%), Gaps = 4/160 (2%)
Frame = +2
Query: 164 RACLVTAKRFRGKINIQRPRLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRG-EKKNKT 340
R + KR R KINIQ+PR+PHF+R+ + + P Y PP+ LP LC EKK K
Sbjct: 14 RQIMFEQKRCRTKINIQKPRIPHFKRRCMEEFVTPYYDPPRPILPVHELCGNIIEKKKKL 73
Query: 341 EID---NPFERILARECLEWFNTSKMIVFLHVNPITMEDKTPVYAALNKNKMYLRTYGKK 511
E+ N ++ I+ R+ L WFN SKMI FLH N I ED+ L + MYL+ YG K
Sbjct: 74 EMSESVNQYQIIIGRDVLNWFNNSKMIAFLHKNSIKTEDEFDFNVLLRRENMYLKYYGYK 133
Query: 512 IVSLATKGTRYEVVNELFTSHQNIIFGQPENAAKMFKILK 631
+ KGT+YE V +L+ + NI+F + KI+K
Sbjct: 134 TMEAGLKGTKYENVLQLWGAPGNIVFCDKPKVDVLLKIIK 173
>UniRef50_UPI00015B5309 Cluster: PREDICTED: similar to
ENSANGP00000012431; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000012431 - Nasonia
vitripennis
Length = 253
Score = 112 bits (269), Expect = 1e-23
Identities = 66/186 (35%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Frame = +2
Query: 164 RACLVTAKRFRGKINIQRPRLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKK--NK 337
R+ KRFRGKINIQRPR PH ER +L P P P C R + K
Sbjct: 13 RSVFTQQKRFRGKINIQRPRPPHHERGKVLKFITPFISNPDTQKPLKERCKRISQTVMQK 72
Query: 338 TEIDNPFERILARECLEWFNTSKMIVFLHVNPITMEDKTPVYAALNKNKMYLRTYGKKIV 517
T+ NP++ I+ARECL WF TS+M+ LH N I E + L + MY + Y I+
Sbjct: 73 TKPINPYDVIIARECLNWFKTSRMVAILHANSIKSEQQFEYAVPLKRANMYFKGYQPSIL 132
Query: 518 SLATKGTRYEVVNELFTSHQNI---IFGQPENAAKMFKILKKAPQFGCHGLGVVQDRLLS 688
+LA K + YE V +L + +F N K+ +I K+ PQ G++ + L
Sbjct: 133 NLALKDSNYEAVLKLCLPTMPVSYFVFSPETNVPKLVQITKRTPQLILMA-GILDGKFLR 191
Query: 689 KNELFR 706
N+ +
Sbjct: 192 LNDFIK 197
>UniRef50_UPI0000DB7731 Cluster: PREDICTED: similar to Amyotrophic
lateral sclerosis 2 chromosome region candidate gene 19
protein (Partitioning-defective 3-like protein) (PAR3-L
protein) (PAR3-beta); n=1; Apis mellifera|Rep: PREDICTED:
similar to Amyotrophic lateral sclerosis 2 chromosome
region candidate gene 19 protein (Partitioning-defective
3-like protein) (PAR3-L protein) (PAR3-beta) - Apis
mellifera
Length = 1101
Score = 89.4 bits (212), Expect = 8e-17
Identities = 51/131 (38%), Positives = 72/131 (54%)
Frame = +2
Query: 155 LEPRACLVTAKRFRGKINIQRPRLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKN 334
L P L KR+RGKINI++P++ +F++++L +L P + P LC+ + K
Sbjct: 896 LTPNQLLYQQKRYRGKINIRKPKI-YFKKRVLNELLTPFFINPNKDKTLEQLCENTKTKE 954
Query: 335 KTEIDNPFERILARECLEWFNTSKMIVFLHVNPITMEDKTPVYAALNKNKMYLRTYGKKI 514
P++ I+ARE WF+ SKMIV LHVN I D V AL K M+ + YG I
Sbjct: 955 FENRLGPYDTIIAREVRNWFDNSKMIVILHVNSIMELDVFDVKVALFKENMHYKRYGAHI 1014
Query: 515 VSLATKGTRYE 547
VS K + YE
Sbjct: 1015 VSNMIKDSPYE 1025
>UniRef50_UPI0000ECBDE1 Cluster: 39S ribosomal protein L10,
mitochondrial precursor (L10mt) (MRP-L10).; n=2; Gallus
gallus|Rep: 39S ribosomal protein L10, mitochondrial
precursor (L10mt) (MRP-L10). - Gallus gallus
Length = 258
Score = 59.7 bits (138), Expect = 7e-08
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Frame = +2
Query: 230 HFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERILARECLEWFNTSKM 409
HF+RQ L+ +++ Y P+ +P+ L R K + E + + R+L ++ E F ++M
Sbjct: 35 HFQRQKLMAVTE--YIAPRPAVPERCLAPR-RKVEEEEEEYGYARLLRQQVEEAFRDNRM 91
Query: 410 IVFLHVNPITMEDKTPVYAALNKNKMYLRTYGKKIVSLATKGTRYEVVNELFTSHQNIIF 589
I N + ED + L K+ + ++ +IV +RY+ + LF S +NI+
Sbjct: 92 IAVCQYNSMPGEDMVLMRHYLRKHNIEVKFVLNEIVRPVLSQSRYKNLLPLFVS-RNILL 150
Query: 590 GQPENAAK-MFKILKKAPQFGCHGLGVVQDRLLSK 691
PE AK M ++LK PQ G + D +LS+
Sbjct: 151 VSPETKAKEMLRVLKGVPQVNLLG-ACIDDTILSR 184
>UniRef50_Q3KQE8 Cluster: LOC446962 protein; n=3; Xenopus|Rep:
LOC446962 protein - Xenopus laevis (African clawed frog)
Length = 245
Score = 42.7 bits (96), Expect = 0.009
Identities = 34/154 (22%), Positives = 67/154 (43%)
Frame = +2
Query: 230 HFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERILARECLEWFNTSKM 409
HF+RQ +L L++ Y PK T+ L + + + + +NP E++L + KM
Sbjct: 36 HFQRQKMLALTE--YIAPKPTVSQKCLPPQPKASDMVK-ENPLEQLLCSQLRTVLQDCKM 92
Query: 410 IVFLHVNPITMEDKTPVYAALNKNKMYLRTYGKKIVSLATKGTRYEVVNELFTSHQNIIF 589
+ N ED + L K+ ++++ + ++V + + LF ++
Sbjct: 93 VAVFQRNAAGDEDLLHLRHRLLKHDIHMKHFPVQVVRKTLSDSHLSSMLPLFMGQTFLVV 152
Query: 590 GQPENAAKMFKILKKAPQFGCHGLGVVQDRLLSK 691
+M + ++ PQ G V+ RLLS+
Sbjct: 153 SHKVKVKEMLQCVRSLPQVQLLG-ACVESRLLSR 185
>UniRef50_Q24IL0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 3637
Score = 34.3 bits (75), Expect = 3.1
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -3
Query: 676 ILYYTQPMTTKLWSFFQNFKHFCSIFRLTEYNILM*GKQFIDNFVACSFCRKAYN 512
I+Y T+ L+S N SI+RLT N ++ Q N +A S +YN
Sbjct: 760 IIYLAGLQTSNLYSSNSNLNQITSIYRLTGKNNIVPSNQLFQNIIAASQTTGSYN 814
>UniRef50_Q5DAM1 Cluster: SJCHGC09520 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09520 protein - Schistosoma
japonicum (Blood fluke)
Length = 181
Score = 33.5 bits (73), Expect = 5.4
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 10/143 (6%)
Frame = +2
Query: 236 ERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERILARECLEWF----NTS 403
E++L ++KP PP P+ + E+ + +NP+ + L + E F +
Sbjct: 34 EQRLFRAVTKPVI-PPININPNERRLRKMEEDRLRKENNPYRKFLIEKAKEEFLKPMENN 92
Query: 404 KMIVFLHVNPITMEDKTPVYAALNKNKMYLRTYGKKIVSLATKGTRYEVVNELFTSHQNI 583
++VF + E PV L M+ + + I+ A +GTRYE+ F H NI
Sbjct: 93 MVLVFQQLYHKAREI-VPVQNKLFLKDMHFKGFPLSILREAAQGTRYEMFTRYFL-HSNI 150
Query: 584 ----IFGQ--PENAAKMFKILKK 634
+F + PE I KK
Sbjct: 151 PNTYLFSEPTPEKCYDAINITKK 173
>UniRef50_Q7VQT3 Cluster: Ornithine carbamoyltransferase; n=232;
cellular organisms|Rep: Ornithine carbamoyltransferase -
Blochmannia floridanus
Length = 347
Score = 33.5 bits (73), Expect = 5.4
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +2
Query: 497 TYGKKIVSLATKGTRYEVVNELFTSHQNIIFGQPENAAKMFKIL 628
T GKKI EV NE+F S +I+F Q EN K L
Sbjct: 284 TIGKKIAHKHNLFNGLEVTNEIFESKHSIVFDQAENRLHTIKAL 327
>UniRef50_Q9PYY8 Cluster: ORF55; n=2; Granulovirus|Rep: ORF55 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 295
Score = 33.1 bits (72), Expect = 7.2
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Frame = +2
Query: 356 FERILARECLEWFNTSKMIVFLHVNPITME--DKT--PVYAALNKNKMY 490
F ++++R LEW +++KM + VNP T E D+ P+Y L+K +MY
Sbjct: 99 FTQLISRLKLEWKSSNKMWSLMGVNPDTKEPYDENGHPLYRILDKIEMY 147
>UniRef50_A5N491 Cluster: Transcriptional regulator; n=1;
Clostridium kluyveri DSM 555|Rep: Transcriptional
regulator - Clostridium kluyveri DSM 555
Length = 301
Score = 33.1 bits (72), Expect = 7.2
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 374 RECLEWFNTSKMIVFLHVNPITMEDKTPVYAALNKNKMYLRTYGKKIVSLATKGTRYE-V 550
RE E N S+ V H+ + E T ++ L + K++L GKK++SLA K + E
Sbjct: 19 REAGEELNYSQSSVSDHIRSLEKELGTKLFERLGR-KVFLNENGKKLISLAEKIIQDEKE 77
Query: 551 VNELFTSHQNI 583
+ LF ++ I
Sbjct: 78 IQGLFNKNEKI 88
>UniRef50_A0DT30 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_62,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 600
Score = 33.1 bits (72), Expect = 7.2
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 248 LLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEI 346
++D S P+Y PKYT+ F++C+ +K +K E+
Sbjct: 250 IIDESLPQYKLPKYTIRHFMVCEWMKKADKGEL 282
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,090,725
Number of Sequences: 1657284
Number of extensions: 14502962
Number of successful extensions: 37279
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 35793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37258
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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