Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0596
(726 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g43520.1 68418.m05321 DC1 domain-containing protein contains ... 30 1.4
At1g28110.2 68414.m03444 serine carboxypeptidase S10 family prot... 29 3.1
At1g28110.1 68414.m03443 serine carboxypeptidase S10 family prot... 29 3.1
At5g51750.1 68418.m06417 subtilase family protein similar to sub... 29 4.1
At3g42530.1 68416.m04410 Ulp1 protease family similar to At5g281... 29 4.1
At1g22360.1 68414.m02797 UDP-glucoronosyl/UDP-glucosyl transfera... 29 4.1
At2g26410.1 68415.m03169 calmodulin-binding family protein simil... 28 5.5
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 28 7.2
At2g39140.1 68415.m04809 pseudouridine synthase family protein 28 7.2
At5g40590.1 68418.m04926 DC1 domain-containing protein predicted... 27 9.6
At2g33530.1 68415.m04110 serine carboxypeptidase S10 family prot... 27 9.6
At2g10350.1 68415.m01087 Ulp1 protease family protein similar to... 27 9.6
At1g70340.1 68414.m08092 expressed protein 27 9.6
At1g44880.1 68414.m05142 Ulp1 protease family protein similar to... 27 9.6
>At5g43520.1 68418.m05321 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 250
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 415 VLTCKPNNNGGQDASLRCLK*E*NVFKNLWKKNCKPCDKRNTLRSC 552
+L C P G +D C + + ++LW CK CD L SC
Sbjct: 140 LLYCTPCK-GREDTYFTCSACDETISEDLWMYYCKDCDYGTHLHSC 184
>At1g28110.2 68414.m03444 serine carboxypeptidase S10 family protein
similar to H.vulgare gene encoding serine
carboxypeptidase II, CP-MII GI:1731989
Length = 461
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 479 NKMYLRTYGKKIVSLATKGTRYEVVNELFTSHQNIIFGQ 595
N +YL T S +T+ + YE VN+ T+ N++F Q
Sbjct: 119 NMLYLETPVGVGFSYSTQSSHYEGVNDKITARDNLVFLQ 157
>At1g28110.1 68414.m03443 serine carboxypeptidase S10 family protein
similar to H.vulgare gene encoding serine
carboxypeptidase II, CP-MII GI:1731989
Length = 461
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 479 NKMYLRTYGKKIVSLATKGTRYEVVNELFTSHQNIIFGQ 595
N +YL T S +T+ + YE VN+ T+ N++F Q
Sbjct: 119 NMLYLETPVGVGFSYSTQSSHYEGVNDKITARDNLVFLQ 157
>At5g51750.1 68418.m06417 subtilase family protein similar to
subtilisin-like protease GI:3687307 from [Lycopersicon
esculentum]
Length = 780
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 186 RGFEGK*IFKGQGCLISNGSYYLIYQNLNMVRPSTHYPTFYF--ATEERKRIKQKLTIPS 359
R F+G ++KG+ L N Y L+Y N P PT + +R+ + K+ I
Sbjct: 366 RTFKGVSLYKGRTVLPKNKQYPLVYLGRNASSPD---PTSFCLDGALDRRHVAGKIVICD 422
Query: 360 KGFWP 374
+G P
Sbjct: 423 RGVTP 427
>At3g42530.1 68416.m04410 Ulp1 protease family similar to At5g28170,
At1g35110, At1g44880, At4g19320, At5g36020, At4g03970,
At3g43010, At2g10350; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 889
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 198 PRNLFAVTKHARGSKRIFFNDDILSF 121
P LFA+ ++ RG I+ DILSF
Sbjct: 18 PNRLFAIDQYPRGRLNIYSRPDILSF 43
>At1g22360.1 68414.m02797 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 481
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +2
Query: 278 PPKYTLPDFLLCDRGEKKNKTEIDNPFERILARE--CLEWFNTS--KMIVFLHVNPITM 442
PP Y++ L ++ E +EI + E CL+W NT +V+++ IT+
Sbjct: 248 PPVYSIGPLHLLEKQESGEYSEIGRTGSNLWREETECLDWLNTKARNSVVYVNFGSITV 306
>At2g26410.1 68415.m03169 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 516
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 218 PRLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNK 337
P LP F Q LL P PP YT+ + + E KN+
Sbjct: 57 PPLPDFAPQPLLPPPSPPPPPPAYTINTRIYGESKESKNR 96
>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28170, At1g35110,
At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
At2g10350
Length = 1043
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 198 PRNLFAVTKHARGSKRIFFNDDILSF 121
P LFA ++ RG I+ DILSF
Sbjct: 18 PNRLFATDQYPRGKLNIYSRPDILSF 43
>At2g39140.1 68415.m04809 pseudouridine synthase family protein
Length = 410
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 401 SKMIVFLHVNPITMEDKTPVYAALNKNKMYLRTYGKKIVSLA 526
S+ I++++ N I + VY ALNK K Y+ + G+K + A
Sbjct: 203 SRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSA 244
>At5g40590.1 68418.m04926 DC1 domain-containing protein predicted
protein, Arabidopsis thaliana
Length = 234
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 496 NLWKKNCKPCDKRNTLRSCQ 555
NLW CK CD L SC+
Sbjct: 154 NLWSYYCKECDYATHLHSCK 173
>At2g33530.1 68415.m04110 serine carboxypeptidase S10 family protein
similar to Serine carboxypeptidase II chains A and B
(SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)
Length = 465
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 479 NKMYLRTYGKKIVSLATKGTRYEVVNELFTSHQNIIFGQ 595
N +YL T S A + + YE VN+ T+ N++F Q
Sbjct: 121 NMLYLETPVGVGFSYANESSSYEGVNDKITAKDNLVFLQ 159
>At2g10350.1 68415.m01087 Ulp1 protease family protein similar to
At5g28170, At1g35110, At1g44880, At3g42530, At4g19320,
At5g36020, At4g03970, At3g43010 ; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1110
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 198 PRNLFAVTKHARGSKRIFFNDDILSF 121
P LFA ++ RG I+ DILSF
Sbjct: 18 PNRLFATDQYPRGRLNIYSRPDILSF 43
>At1g70340.1 68414.m08092 expressed protein
Length = 510
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 308 LCDRGEKKNKTEIDNPFERIL-ARECLEWFNTSKMI 412
+CDR KKN + +PF+ L A+E + +TSK I
Sbjct: 223 VCDRQAKKNNASLFSPFKSSLEAQEDVVPLSTSKKI 258
>At1g44880.1 68414.m05142 Ulp1 protease family protein similar to
At5g28170, At1g35110, At3g42530, At4g19320, At5g36020,
At4g03970, At3g43010, At2g10350; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1038
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 198 PRNLFAVTKHARGSKRIFFNDDILSF 121
P LFA ++ RG I+ DILSF
Sbjct: 18 PNRLFATDQYPRGRLNIYSRPDILSF 43
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,768,361
Number of Sequences: 28952
Number of extensions: 331363
Number of successful extensions: 887
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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