Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0593
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   121   8e-30
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   121   8e-30
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   111   8e-27
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.17 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.1  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   4.9  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  121 bits (291), Expect = 8e-30
 Identities = 53/83 (63%), Positives = 72/83 (86%)
 Frame = +1

Query: 4   DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
           DSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ +H+IVLVGGSTRIP
Sbjct: 113 DSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIP 172

Query: 184 KVQKLLQDFFNGKELNKSINPDE 252
           KVQ+L+ ++FNGKE  +SINPDE
Sbjct: 173 KVQQLITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  121 bits (291), Expect = 8e-30
 Identities = 53/83 (63%), Positives = 72/83 (86%)
 Frame = +1

Query: 4   DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
           DSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ +H+IVLVGGSTRIP
Sbjct: 113 DSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIP 172

Query: 184 KVQKLLQDFFNGKELNKSINPDE 252
           KVQ+L+ ++FNGKE  +SINPDE
Sbjct: 173 KVQQLITEYFNGKEPCRSINPDE 195


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  111 bits (266), Expect = 8e-27
 Identities = 51/83 (61%), Positives = 66/83 (79%)
 Frame = +1

Query: 4   DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
           ++L    DF  ++TRA+FEELN D F  T++PV+K L DA M K QI +IVLVGGSTRIP
Sbjct: 112 ENLLADYDFSETLTRAKFEELNNDQFLKTLKPVKKVLEDADMTKDQIDEIVLVGGSTRIP 171

Query: 184 KVQKLLQDFFNGKELNKSINPDE 252
           K+Q+L++DFF+GKELN+ INPDE
Sbjct: 172 KIQQLIKDFFDGKELNRGINPDE 194


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -3

Query: 145 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 44
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 526 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNK 642
           +   G+  A   V  I+   D+D NG  N + ++K+  K
Sbjct: 56  YSFIGVNDADWSVLVIDPELDVDQNGFRNFTNLKKTHPK 94


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 196 LLQDFFNGKELNKSINPDE 252
           +  DF NGK L++S   D+
Sbjct: 15  IFSDFVNGKTLHRSTRDDK 33


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 160 PVQYRGFEPYPSWHHGETSPLAP 92
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 534 QLEFTEQVVIFGHSTLTLKYLDEYSGLV 451
           Q    +QV  F HS  ++ +L E  GLV
Sbjct: 362 QYVMQQQVKNFRHSVRSVFFLSEIFGLV 389


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.312    0.133    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,283
Number of Sequences: 336
Number of extensions: 3660
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)