Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0593
(798 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 371 e-104
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 370 e-103
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 283 2e-77
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 240 2e-64
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 208 9e-55
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 71 1e-13
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 58 2e-09
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 51 2e-07
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 31 0.14
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.77
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 28 1.3
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 1.3
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 1.8
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 2.4
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 3.1
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 27 4.1
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 27 4.1
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 5.4
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 5.4
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 7.2
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 7.2
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 26 7.2
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 7.2
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 7.2
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 25 9.5
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 25 9.5
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 25 9.5
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 9.5
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.5
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 9.5
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 371 bits (912), Expect = e-104
Identities = 186/265 (70%), Positives = 205/265 (77%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
DSLFEGIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+K+DKA +++IVLVGGSTRIP
Sbjct: 283 DSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIP 342
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIE 363
+VQKL+ DFFNGKE KSINPDE +L GD SE+ QD GIE
Sbjct: 343 RVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIE 402
Query: 364 TAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 543
TAGGVMT LIKRN YSDNQPGVLIQVFEGERA TKD NLLGKFEL+GI
Sbjct: 403 TAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGI 462
Query: 544 PPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 723
PPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV EAEK
Sbjct: 463 PPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEK 522
Query: 724 YRNEDDKQKETIQAKNALESYCFSM 798
Y+ ED+ + IQAKN LESY +S+
Sbjct: 523 YKAEDEAESGRIQAKNHLESYAYSL 547
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 370 bits (910), Expect = e-103
Identities = 184/265 (69%), Positives = 207/265 (78%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
DSL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+K+DK+ +++IVLVGGSTRIP
Sbjct: 283 DSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIP 342
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIE 363
++QKL+ DFFNGKE KSINPDE IL GD SE+ QD GIE
Sbjct: 343 RIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIE 402
Query: 364 TAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 543
TAGGVMT LIKRN Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+GI
Sbjct: 403 TAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGI 462
Query: 544 PPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 723
PPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV+EAEK
Sbjct: 463 PPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEK 522
Query: 724 YRNEDDKQKETIQAKNALESYCFSM 798
Y+ ED+ + IQAKN LESY +S+
Sbjct: 523 YKAEDEAETSRIQAKNHLESYAYSL 547
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 283 bits (694), Expect = 2e-77
Identities = 143/266 (53%), Positives = 185/266 (69%), Gaps = 1/266 (0%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
+S F G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ + K++I DIVLVGGSTRIP
Sbjct: 315 ESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIP 374
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIE 363
KVQ+LL+ FF GK+ +K INPDE +L G++ + + GIE
Sbjct: 375 KVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIE 431
Query: 364 TAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 543
T GGVMT LI RN DNQ VLIQV+EGER +TKDNNLLGKF+L GI
Sbjct: 432 TTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRGI 491
Query: 544 PPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITITNDKGRLSKEEIERMVNEAE 720
PPAPRGVPQIEVTF++DANG+L VSA++KS K K+ I NDKGRLS+E+IERMV EAE
Sbjct: 492 PPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAE 551
Query: 721 KYRNEDDKQKETIQAKNALESYCFSM 798
++ ED KE I+A+N LE+Y +S+
Sbjct: 552 EFAEEDKILKERIEARNTLENYAYSL 577
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 240 bits (587), Expect = 2e-64
Identities = 119/262 (45%), Positives = 165/262 (62%), Gaps = 1/262 (0%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
DSL GIDF +SITRARFE++NA F++T++PV K L+D+K+ KA +HDIVLVGGSTRIP
Sbjct: 287 DSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKADVHDIVLVGGSTRIP 346
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL-HGDKSEEVQDXXXXXXXXXXXGI 360
KVQ+L+ DFF+G+ LNKSINPDE +L + S++ QD G+
Sbjct: 347 KVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGV 406
Query: 361 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 540
G V + RN +DNQ V V++GER +N LG+F+LTG
Sbjct: 407 AMEGNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGERVNCAENEPLGEFQLTG 466
Query: 541 IPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE 720
IPP PRG ++E TF++DANGIL V+A+EK+T + I ITN G LS +I+ M+ A+
Sbjct: 467 IPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENAD 526
Query: 721 KYRNEDDKQKETIQAKNALESY 786
K++ +D + ++AK+ LESY
Sbjct: 527 KFKQQDKDFAKKLEAKSQLESY 548
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 208 bits (507), Expect = 9e-55
Identities = 109/250 (43%), Positives = 155/250 (62%)
Frame = +1
Query: 40 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 219
I+RA+FE+L L R T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F
Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK- 401
Query: 220 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 399
+E KS+NPDE +L G V+D GIET GGV T LI R
Sbjct: 402 REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINR 457
Query: 400 NXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 579
N +D Q V I+VF+GER + +DN L+G F+LTGI PAP+G PQIEV
Sbjct: 458 NTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEV 517
Query: 580 TFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETI 759
+FD+DA+GI+NVSA +K+TNK++ IT+ G L+ EIE MV +AEKYR D +KE I
Sbjct: 518 SFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAI 576
Query: 760 QAKNALESYC 789
+ N ES C
Sbjct: 577 ENGNRAESVC 586
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 71.3 bits (167), Expect = 1e-13
Identities = 31/83 (37%), Positives = 55/83 (66%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
+ L +GIDF ITR+ E L D+ + +EP+ K+L+ A + ++I+ I+L GG++RIP
Sbjct: 319 EELADGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTFSEINSIILFGGASRIP 378
Query: 184 KVQKLLQDFFNGKELNKSINPDE 252
+Q L D+ + +++K++N DE
Sbjct: 379 FIQSTLADYVSSDKISKNVNADE 401
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 57.6 bits (133), Expect = 2e-09
Identities = 30/83 (36%), Positives = 50/83 (60%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
+ + ID + I R+ FEEL L P+EK+L A + K ++ I +VGG TR+P
Sbjct: 291 EMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALELAGIKKEDLYSIEMVGGCTRVP 350
Query: 184 KVQKLLQDFFNGKELNKSINPDE 252
V++++ ++F GK L+ ++N DE
Sbjct: 351 IVKEVIANYF-GKGLSFTLNQDE 372
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 628 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCF 792
K K ++++ + RL E +E+ EAE DK ET+ KNALE Y +
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIY 588
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/78 (29%), Positives = 45/78 (57%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
DSL +GIDF++SI R R++ + + V +++ A M+ I +++L GG++ P
Sbjct: 309 DSLADGIDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFDISEVILAGGASNTP 368
Query: 184 KVQKLLQDFFNGKELNKS 237
K+ L++ F + + +S
Sbjct: 369 KLTSLMESIFPEQTIIRS 386
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 31.5 bits (68), Expect = 0.14
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 592 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE--TIQA 765
D LNVS + S +E +T ++ R+ +EE +RM ++ E K+K T+Q
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQG 117
Query: 766 KNA 774
+A
Sbjct: 118 LDA 120
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.77
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 670 KGRLSKEEIERMVNEAEKYRNEDD 741
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 637 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCF 792
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKF 576
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 1.3
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -1
Query: 333 KQQQILHLLR-LVTVQDSSLDSCTISYG-LVRVNRFV--ELLSIKEILQELLHLGDTSGA 166
K QQ+L LL LV D+ +DS + L ++ V S+ ELL LGD S
Sbjct: 932 KHQQLLDLLESLVGNNDNLIDSIKTPHTELQKITDHVLKGTTSLANHTNELLGLGDESLC 991
Query: 165 THQYNIVDLSLIHLGIT 115
+ I D SL+ L T
Sbjct: 992 NLETTIEDTSLVKLETT 1008
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 607 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 738
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 600 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 704
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 617 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 480
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +1
Query: 613 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 774
V A+ KS +++ ++ G + EEI ++++ E E+D++ E N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 26.6 bits (56), Expect = 4.1
Identities = 24/95 (25%), Positives = 35/95 (36%)
Frame = -1
Query: 546 WDPGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSS 367
WD G+ ++ I GHS +L L+ +G V+ S+ H
Sbjct: 61 WDNGKFSLVDRFTIDGHSPTSLCVLE--NGSVLTANYNSASISRSKAKDEKPHVWHHEGK 118
Query: 366 SLNTEGKGCYIKQQQILHLLRLVTVQDSSLDSCTI 262
SL+ E + Q H LV D LD +I
Sbjct: 119 SLHPERQTSSHPHQVTAH-KHLVCSVDLGLDRFSI 152
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 148 RGFEPYPSWHHGETSPLAP 92
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 401 TLPSPLNRLRHSPPTLITNPEYSSKYLR 484
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 670 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 780
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 7 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 165
SL G+D+YT I E +A +S+ E +K D + D++ D + VG
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVG 380
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 631 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 792
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.8 bits (54), Expect = 7.2
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Frame = +1
Query: 562 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK------ 723
+ ++ +F + N + +I K+ N+E +K R+ E+ ++++ +K
Sbjct: 1213 IDKVRNSFFKNLNSFYEMYSIAKAENEER---FEKEKRRIMSEDRDKLIRGRQKTSIVAK 1269
Query: 724 YRN-------EDDKQKETIQAKNALES 783
YRN DDKQ + KN+LE+
Sbjct: 1270 YRNKRELPEDSDDKQDTASKDKNSLET 1296
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 682 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYC 789
S+ E +++ E ++ ED+KQ E + K AL+ +C
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFC 334
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 562 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITN-DKGRLSKEEIERMVNEAEK 723
+P TF NG++N+S + ++ N E + DKGR + + ++ E K
Sbjct: 122 IPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFK 176
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = -1
Query: 471 DEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTV 292
D+YS L + + EC+++F + D S+ N EGK ++L LL
Sbjct: 343 DQYS-LHLTMAQECMNIFEKQQLNLIGAIEQDLSTGSNVEGKVPRSVLSELLPLLDEGNA 401
Query: 291 QDSSLDSCTISYGLVR 244
++S+ + Y + R
Sbjct: 402 EESTKIRLLLLYIIYR 417
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 25.4 bits (53), Expect = 9.5
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 598 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNA 774
+GIL+ + IEK +K K+ + N+ SK+ + + + +E DK KN
Sbjct: 154 DGILSFTVIEKVDDKNLKVRVNNNGKISSKKGVNLPKTDVDLPALSEKDKADLRFGVKNG 213
Query: 775 LE 780
++
Sbjct: 214 VD 215
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 628 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 756
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 598 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 738
N + N S +KS+NKE + + RLS + + K ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +2
Query: 74 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 163
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.133 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,098,035
Number of Sequences: 5004
Number of extensions: 61847
Number of successful extensions: 226
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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