Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0593
         (798 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              26   1.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    26   1.6  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    26   1.6  
AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    25   3.6  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   4.7  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    24   6.3  
AY390608-1|AAR27305.1|  242|Anopheles gambiae SP22D protein.           23   8.3  
AY390607-1|AAR27304.1|  242|Anopheles gambiae SP22D protein.           23   8.3  
AY390606-1|AAR27303.1|  241|Anopheles gambiae SP22D protein.           23   8.3  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 597 QRYPQRFRYREVHQQGEQDHHYQRQR 674
           QR PQR+      QQ +Q H  Q+Q+
Sbjct: 354 QRQPQRYVVAGSSQQQQQQHQQQQQK 379


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 582  LRHRCQRYPQRFRYREVHQQGEQDHHYQRQRS 677
            L+ + Q+  Q+ +  + HQQ +  HH+Q Q S
Sbjct: 1308 LQQQQQQQQQQQQQHQQHQQHQLQHHHQPQLS 1339


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 664 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALES 783
           N++ R  +EE ++M NE+ K   +   QK+  Q    + S
Sbjct: 204 NEQARREREEQDKMKNESLKSAQQHHSQKQAQQEHTVVGS 243


>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +1

Query: 553 PRGVPQIEVTFDIDANGILNVSAIEK---STNKENKITITNDKGRLSKEEIERMVNEAEK 723
           P+G  + ++   + ++GIL ++   K     N+E  I IT+  G+  K+   +   E   
Sbjct: 65  PKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITH-TGQPMKQVTGKAAPENGH 123

Query: 724 YRNEDDKQK 750
            + E +K +
Sbjct: 124 SKKEGEKME 132


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +1

Query: 610  NVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNE 735
            N+ A++K      KI  TN++   ++++ ++     EK +NE
Sbjct: 1024 NMKAMQKLDRVTEKIQSTNEEFEAARKKAKKAKAAFEKVKNE 1065


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 553 PRGVPQIEVTFDIDANGILNVSAIEKSTNKE--NKITITNDKGRLS 684
           P G   +  T+D+  +G+LN  A+    N +    I I  D G L+
Sbjct: 255 PDGFMALVDTYDVKRSGLLNFCAVALGLNDQGYRAIGIRIDSGDLA 300


>AY390608-1|AAR27305.1|  242|Anopheles gambiae SP22D protein.
          Length = 242

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 597 QRYPQRFRYREVHQQGEQDHHYQRQRSSL 683
           QR PQ+F+ ++   Q  Q    QRQ+  L
Sbjct: 189 QRQPQQFQQQQRQPQYLQPQQAQRQQEEL 217


>AY390607-1|AAR27304.1|  242|Anopheles gambiae SP22D protein.
          Length = 242

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 597 QRYPQRFRYREVHQQGEQDHHYQRQRSSL 683
           QR PQ+F+ ++   Q  Q    QRQ+  L
Sbjct: 189 QRQPQQFQQQQRQPQYLQPQQAQRQQEEL 217


>AY390606-1|AAR27303.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 597 QRYPQRFRYREVHQQGEQDHHYQRQRSSL 683
           QR PQ+F+ ++   Q  Q    QRQ+  L
Sbjct: 188 QRQPQQFQQQQRQPQYLQPQQSQRQQEEL 216


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.133    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 781,179
Number of Sequences: 2352
Number of extensions: 16005
Number of successful extensions: 54
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)