Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0593
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 402 e-112
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 392 e-109
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 345 2e-95
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 345 2e-95
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 338 3e-93
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 300 6e-82
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 298 3e-81
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 286 1e-77
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 220 1e-57
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 205 2e-53
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 132 2e-31
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 132 2e-31
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 124 1e-28
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 65 5e-11
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 63 3e-10
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 59 3e-09
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical ... 31 0.96
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily a... 30 2.2
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 29 2.9
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 29 2.9
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 29 2.9
Z81118-2|CAB03324.2| 318|Caenorhabditis elegans Hypothetical pr... 29 3.9
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 29 3.9
Z92849-8|CAB07427.3| 523|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 29 5.1
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 6.7
Z99281-44|CAJ76963.1| 96|Caenorhabditis elegans Hypothetical p... 28 8.9
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 28 8.9
U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical pr... 28 8.9
L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical pr... 28 8.9
L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical ... 28 8.9
AC024819-2|AAF59588.1| 71|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical protein
F26D10.3 protein.
Length = 640
Score = 402 bits (990), Expect = e-112
Identities = 199/265 (75%), Positives = 216/265 (81%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
DSLFEGIDFYT+ITRARFEEL ADLFRSTM+PVEKSLRDAKMDK+Q+HDIVLVGGSTRIP
Sbjct: 286 DSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVHDIVLVGGSTRIP 345
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIE 363
KVQKLL D F+GKELNKSINPDE IL GDKSE VQD GIE
Sbjct: 346 KVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIE 405
Query: 364 TAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 543
TAGGVMT LIKRN YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+GI
Sbjct: 406 TAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGI 465
Query: 544 PPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 723
PPAPRGVPQIEVTFDIDANGILNVSA +KST K+NKITITNDKGRLSK++IERMVNEAEK
Sbjct: 466 PPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSKDDIERMVNEAEK 525
Query: 724 YRNEDDKQKETIQAKNALESYCFSM 798
Y+ +D+ QK+ I AKN LESY F++
Sbjct: 526 YKADDEAQKDRIGAKNGLESYAFNL 550
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.elegans
heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 392 bits (966), Expect = e-109
Identities = 195/265 (73%), Positives = 212/265 (80%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
DSLFEGIDFYT+ITRARFEEL ADLFRSTM+PVEKSLRDAKMDK+Q+HDIVLVGGSTRIP
Sbjct: 286 DSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVHDIVLVGGSTRIP 345
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIE 363
KVQKLL D F+GKELNKSINPDE IL GDKSE VQD GIE
Sbjct: 346 KVQKLLSDLFSGKELNKSINPDEALAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIE 405
Query: 364 TAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 543
TAGGVMT LIKRN YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+GI
Sbjct: 406 TAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGI 465
Query: 544 PPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 723
PPAPRGVPQIEVTFDIDANGILNVSA +KST K +ITITNDK R SK++IERMVNEAEK
Sbjct: 466 PPAPRGVPQIEVTFDIDANGILNVSATDKSTGKAKQITITNDKDRFSKDDIERMVNEAEK 525
Query: 724 YRNEDDKQKETIQAKNALESYCFSM 798
Y+ +D+ QK+ I AKN LESY F++
Sbjct: 526 YKADDEAQKDRIGAKNGLESYAFNL 550
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical protein
F44E5.5 protein.
Length = 645
Score = 345 bits (848), Expect = 2e-95
Identities = 167/265 (63%), Positives = 202/265 (76%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
DSLFEGID T ITRARFEEL ADLFR T+EPVEK+LRDAK+DK++I ++VLVGGSTR+P
Sbjct: 286 DSLFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDAKLDKSKIDEVVLVGGSTRVP 345
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIE 363
K+QKLL+DFFNGKELN SINPDE +L G K E ++D GIE
Sbjct: 346 KIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGIE 405
Query: 364 TAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 543
TAGGVMT LI RN Y+DNQPGV IQV+EGERAMT+DN+ LG FEL+GI
Sbjct: 406 TAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGI 465
Query: 544 PPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 723
PPAPRGVPQIEVTFDIDANGILNVSA +KST K N+ITI N+KGRL++ +I+RMV+EA++
Sbjct: 466 PPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQ 525
Query: 724 YRNEDDKQKETIQAKNALESYCFSM 798
+ ED +Q+E +QA+N LE+Y F +
Sbjct: 526 FEKEDGEQRERVQARNQLEAYAFQI 550
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical protein
F44E5.4 protein.
Length = 645
Score = 345 bits (848), Expect = 2e-95
Identities = 167/265 (63%), Positives = 202/265 (76%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
DSLFEGID T ITRARFEEL ADLFR T+EPVEK+LRDAK+DK++I ++VLVGGSTR+P
Sbjct: 286 DSLFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDAKLDKSKIDEVVLVGGSTRVP 345
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIE 363
K+QKLL+DFFNGKELN SINPDE +L G K E ++D GIE
Sbjct: 346 KIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGIE 405
Query: 364 TAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 543
TAGGVMT LI RN Y+DNQPGV IQV+EGERAMT+DN+ LG FEL+GI
Sbjct: 406 TAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGI 465
Query: 544 PPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 723
PPAPRGVPQIEVTFDIDANGILNVSA +KST K N+ITI N+KGRL++ +I+RMV+EA++
Sbjct: 466 PPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQ 525
Query: 724 YRNEDDKQKETIQAKNALESYCFSM 798
+ ED +Q+E +QA+N LE+Y F +
Sbjct: 526 FEKEDGEQRERVQARNQLEAYAFQI 550
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical protein
C12C8.1 protein.
Length = 643
Score = 338 bits (831), Expect = 3e-93
Identities = 162/265 (61%), Positives = 199/265 (75%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
DSLF+G DFY+ ITRARFEEL ADLFR T+EPVEK+LRDAK DK +I ++VLVGGSTRIP
Sbjct: 286 DSLFDGTDFYSKITRARFEELCADLFRKTLEPVEKALRDAKTDKGRIDEVVLVGGSTRIP 345
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIE 363
K+QKLL++FFNGK+LN SINPDE +L G K + ++D GIE
Sbjct: 346 KIQKLLKEFFNGKDLNCSINPDEAVAFGAAVQAAVLSGVKDDTIKDVLLVDVVPLSHGIE 405
Query: 364 TAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 543
TAGGVMT LI RN Y+DNQPGV IQV+EGERAMT+DN+ LG FELTGI
Sbjct: 406 TAGGVMTNLIDRNTRIPAKASKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELTGI 465
Query: 544 PPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 723
PPAPRGVPQ++VTFDIDANGILNVSA +KST + N+ITI N+KGRLS+ +I+RMVNEA++
Sbjct: 466 PPAPRGVPQVDVTFDIDANGILNVSAADKSTGRSNRITIRNEKGRLSQADIDRMVNEAKQ 525
Query: 724 YRNEDDKQKETIQAKNALESYCFSM 798
+ ED Q++ I ++N LE+Y F +
Sbjct: 526 FEREDAAQRDRISSRNQLEAYAFQV 550
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 300 bits (737), Expect = 6e-82
Identities = 145/265 (54%), Positives = 190/265 (71%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L D+ + K +H+IVLVGGSTRIP
Sbjct: 315 ESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIP 374
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIE 363
KVQ+L+++FFNGKE ++ INPDE ++ G+ E+ + GIE
Sbjct: 375 KVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGIE 432
Query: 364 TAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 543
T GGVMT LI RN +DNQP V IQVFEGER MTKDN+ LGKF+LTG+
Sbjct: 433 TVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGL 492
Query: 544 PPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 723
PPAPRGVPQIEVTF+ID NGIL+V+A +K T +NKITITND+ RLS E+IERM+N+AEK
Sbjct: 493 PPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIERMINDAEK 552
Query: 724 YRNEDDKQKETIQAKNALESYCFSM 798
+ +D K K+ +A+N LESY +++
Sbjct: 553 FAEDDKKVKDKAEARNELESYAYNL 577
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. elegans
BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 298 bits (731), Expect = 3e-81
Identities = 144/265 (54%), Positives = 189/265 (71%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L D+ + K +H+IVLVGGSTRIP
Sbjct: 315 ESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIP 374
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIE 363
KVQ+L+++FFNGKE ++ INPDE ++ G+ E+ + GIE
Sbjct: 375 KVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGIE 432
Query: 364 TAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 543
T GGVMT LI RN +DNQP V IQVFEGER MTKDN+ LGKF+LTG+
Sbjct: 433 TVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGL 492
Query: 544 PPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 723
PPAPRGVPQIEVTF+ID NGIL+V+A +K T +NKITITND+ RLS E+IE M+N+AEK
Sbjct: 493 PPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIEAMINDAEK 552
Query: 724 YRNEDDKQKETIQAKNALESYCFSM 798
+ +D K K+ +A+N LESY +++
Sbjct: 553 FAEDDKKVKDKAEARNELESYAYNL 577
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock protein
protein 4 protein.
Length = 657
Score = 286 bits (702), Expect = 1e-77
Identities = 139/265 (52%), Positives = 182/265 (68%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L DA M K +H+IVLVGGSTRIP
Sbjct: 312 ESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDADMKKTDVHEIVLVGGSTRIP 371
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIE 363
KVQ+L++D+FNGKE ++ INPDE ++ G E D GIE
Sbjct: 372 KVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLGIE 429
Query: 364 TAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 543
T GGVMT LI RN +D+Q V I ++EGER M DN+ LG F++TGI
Sbjct: 430 TVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGI 489
Query: 544 PPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 723
PPAPRGVPQIEVTF+ID NGIL+VSA +K T +NK+TITND RLS E+IERM+N+A+K
Sbjct: 490 PPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADK 549
Query: 724 YRNEDDKQKETIQAKNALESYCFSM 798
+ +D QKE ++++N LE+Y + M
Sbjct: 550 FAADDQAQKEKVESRNELEAYAYQM 574
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 220 bits (537), Expect = 1e-57
Identities = 117/247 (47%), Positives = 153/247 (61%)
Frame = +1
Query: 40 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 219
+TRA+FE++ DL + T+EP K+L DA++ +QI D++LVGG +R+PKVQ +Q+ F G
Sbjct: 325 LTRAKFEQIVGDLIKRTIEPCRKALHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-G 383
Query: 220 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 399
K +K++NPDE +L GD V D GIET GG+MT LI R
Sbjct: 384 KVPSKAVNPDEAVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGIETLGGIMTKLITR 439
Query: 400 NXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 579
N +D Q V I+VF+GER M N LLG+F L GIPPAPRGVPQ+EV
Sbjct: 440 NTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEV 499
Query: 580 TFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETI 759
TFDIDANGI+NVSA ++ T KE +I I G LSK++IE M+ EAEK ED K+KE +
Sbjct: 500 TFDIDANGIVNVSARDRGTGKEQQIVI-QSSGGLSKDQIENMIKEAEKNAAEDAKRKELV 558
Query: 760 QAKNALE 780
+ N E
Sbjct: 559 EVINQAE 565
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 205 bits (501), Expect = 2e-53
Identities = 101/207 (48%), Positives = 134/207 (64%)
Frame = +1
Query: 178 IPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXG 357
IPKVQ+L++D+FNGKE ++ INPDE ++ G E D G
Sbjct: 1 IPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLG 58
Query: 358 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 537
IET GGVMT LI RN +D+Q V I ++EGER M DN+ LG F++T
Sbjct: 59 IETVGGVMTKLIGRNTVIPTKKSQVFPTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVT 118
Query: 538 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 717
GIPPAPRGVPQIEVTF+ID NGIL+VSA +K T +NK+TITND RLS E+IERM+N+A
Sbjct: 119 GIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDA 178
Query: 718 EKYRNEDDKQKETIQAKNALESYCFSM 798
+K+ +D QKE ++++N LE+Y + +
Sbjct: 179 DKFAADDQAQKEKVESRNELEAYAYQI 205
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 132 bits (320), Expect = 2e-31
Identities = 82/250 (32%), Positives = 130/250 (52%), Gaps = 1/250 (0%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
+ L GIDF I+R FE +L +T+ VE+ +R+A + K+QI++IVLVGGSTRIP
Sbjct: 282 ECLHLGIDFIMRISRTDFESWIENLLMATVIHVERVIREANLKKSQINEIVLVGGSTRIP 341
Query: 184 KVQKLL-QDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 360
++ ++ Q F + + +SI+PDE +L G +EEVQD G+
Sbjct: 342 ILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAAVLSG--AEEVQDMRLIDVIPMSIGV 399
Query: 361 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 540
+ M+ LIK+ D Q + + V+EGER + N LG+ L
Sbjct: 400 QCNRDYMSVLIKKGTVFPCTKRKTFINSDDFQTSINVPVYEGERVLCSHNRQLGEISLP- 458
Query: 541 IPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE 720
I P RG +++T ++D NGIL +A++ +T K TI D ++ EI+ M +++E
Sbjct: 459 IQPKRRGESVVDITLEVDYNGILQATALDLNTKKAITTTILYDCCTYTQPEIDEMTSQSE 518
Query: 721 KYRNEDDKQK 750
+ R D+ K
Sbjct: 519 EDRIFDEHFK 528
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical protein
F11F1.1 protein.
Length = 607
Score = 132 bits (320), Expect = 2e-31
Identities = 82/250 (32%), Positives = 130/250 (52%), Gaps = 1/250 (0%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
+ L GIDF I+R FE +L +T+ VE+ +R+A + K+QI++IVLVGGSTRIP
Sbjct: 282 ECLHLGIDFIMRISRTDFESWIENLLMATVIHVERVIREANLKKSQINEIVLVGGSTRIP 341
Query: 184 KVQKLL-QDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 360
++ ++ Q F + + +SI+PDE +L G +EEVQD G+
Sbjct: 342 ILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAAVLSG--AEEVQDMRLIDVIPMSIGV 399
Query: 361 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTG 540
+ M+ LIK+ D Q + + V+EGER + N LG+ L
Sbjct: 400 QCNRDYMSVLIKKGTVFPCTKRKTFINSDDFQTSINVPVYEGERVLCSHNRQLGEISLP- 458
Query: 541 IPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE 720
I P RG +++T ++D NGIL +A++ +T K TI D ++ EI+ M +++E
Sbjct: 459 IQPKRRGESVVDITLEVDYNGILQATALDLNTKKAITTTILYDCCTYTQPEIDEMTSQSE 518
Query: 721 KYRNEDDKQK 750
+ R D+ K
Sbjct: 519 EDRIFDEHFK 528
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 124 bits (298), Expect = 1e-28
Identities = 69/168 (41%), Positives = 93/168 (55%)
Frame = +1
Query: 40 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 219
+TRA+FE++ DL + T+EP L DA++ +QI D++LVGG +R+PKVQ +Q+ F G
Sbjct: 325 LTRAKFEQIVGDLIKRTIEPCRNVLHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-G 383
Query: 220 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 399
K +K++NPDE +L GD V D GIET GG+MT LI R
Sbjct: 384 KVPSKAVNPDEAVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGIETLGGIMTKLITR 439
Query: 400 NXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 543
N +D Q V I+VF+GER M N LLG+F L GI
Sbjct: 440 NTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGI 487
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 65.3 bits (152), Expect = 5e-11
Identities = 30/70 (42%), Positives = 46/70 (65%)
Frame = +1
Query: 40 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 219
+TR FE LN DL ++ P+ +L DA +D A + +IVLVGGST++P V+K++ FF
Sbjct: 329 LTRDEFETLNGDLLKAIELPITAALADANLDTADVDEIVLVGGSTQVPAVRKIVGRFFK- 387
Query: 220 KELNKSINPD 249
K N ++P+
Sbjct: 388 KSANYGVDPE 397
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 62.9 bits (146), Expect = 3e-10
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
+S E ID +TR F L +D+ EP+E++LR A++ I VL+G TR+P
Sbjct: 320 ESAHEDIDAKLKVTREDFNHLISDMESRFGEPIEQALRMAQIPIDDIDQFVLMGAGTRVP 379
Query: 184 KVQKLLQDFFNGKELNKSINPDE 252
KVQ+++Q KE+ K +N DE
Sbjct: 380 KVQEIVQKTIGTKEIGKFLNTDE 402
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +1
Query: 622 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALES 783
+++ K KIT +D + K +I+ +V EAEK + E DK+KE K A ES
Sbjct: 860 VDRFMKKMKKITTLDDLAKDGKIDIDTIVEEAEKKKAEQDKKKEKKSTKKANES 913
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical protein
T14G8.3b protein.
Length = 905
Score = 59.3 bits (137), Expect = 3e-09
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 16/275 (5%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
+SLFE +F +TR E++ DL P+ ++ A++ I +VL+G TR+P
Sbjct: 307 ESLFEEQNFRAKVTREELEKMIEDLEPRIAAPILDAIGMAQISTNDIDLVVLMGAGTRVP 366
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI- 360
KV+++L+ KE++ +N DE H KS +V +
Sbjct: 367 KVKEILKTILKDKEISNFLNTDE--AIAMGAVYQAAHLSKSFKVLPFNVHEKILYPVFVN 424
Query: 361 ---ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFE 531
+T G M + K +S I + + D N L E
Sbjct: 425 FLTKTEEGTMKPIRKSLFGENYPVPNRVMHFSSYSDDFKIDIQDA------DKNPLSTVE 478
Query: 532 LTGIPPAPRG--------VPQIEVTFDIDANGILNVS----AIEKSTNKENKITITNDKG 675
++G+ A + ++ TF ID +GI++V +EK E K DK
Sbjct: 479 ISGVKDAIEKEVTDENSVLKGVKTTFSIDLSGIVSVEKASVVVEKVPTPEEK-----DKY 533
Query: 676 RLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 780
+ K+E + E E+ + ++ +K+ + K E
Sbjct: 534 EVDKKEFDEWEKEQEELKKKEKAEKKEKEEKKKTE 568
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical protein
T14G8.3a protein.
Length = 921
Score = 59.3 bits (137), Expect = 3e-09
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 16/275 (5%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 183
+SLFE +F +TR E++ DL P+ ++ A++ I +VL+G TR+P
Sbjct: 323 ESLFEEQNFRAKVTREELEKMIEDLEPRIAAPILDAIGMAQISTNDIDLVVLMGAGTRVP 382
Query: 184 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI- 360
KV+++L+ KE++ +N DE H KS +V +
Sbjct: 383 KVKEILKTILKDKEISNFLNTDE--AIAMGAVYQAAHLSKSFKVLPFNVHEKILYPVFVN 440
Query: 361 ---ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFE 531
+T G M + K +S I + + D N L E
Sbjct: 441 FLTKTEEGTMKPIRKSLFGENYPVPNRVMHFSSYSDDFKIDIQDA------DKNPLSTVE 494
Query: 532 LTGIPPAPRG--------VPQIEVTFDIDANGILNVS----AIEKSTNKENKITITNDKG 675
++G+ A + ++ TF ID +GI++V +EK E K DK
Sbjct: 495 ISGVKDAIEKEVTDENSVLKGVKTTFSIDLSGIVSVEKASVVVEKVPTPEEK-----DKY 549
Query: 676 RLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 780
+ K+E + E E+ + ++ +K+ + K E
Sbjct: 550 EVDKKEFDEWEKEQEELKKKEKAEKKEKEEKKKTE 584
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ-IHDIVLVGGSTRI 180
+ E D + R FE+L A +F + + D K + I +I +VGGS+RI
Sbjct: 291 ECFMEDKDVTGKMQRQEFEDLAAPIFNRIKQVLINLFADGVSIKPEEIDEIEIVGGSSRI 350
Query: 181 PKVQKLLQDFFNGKELNKSINPDE 252
P ++++++D F GKE ++N DE
Sbjct: 351 PMIREIVKDLF-GKEPKTTMNQDE 373
>AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical
protein W03D8.2 protein.
Length = 306
Score = 31.1 bits (67), Expect = 0.96
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -1
Query: 513 VVIFGHSTLTLKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSS-LNTEGKGCY 337
+VI GH Y G V+R GG +SLFS L+ GH +SS L E G
Sbjct: 208 LVIRGHQLFKEMYPQ---GCVLRFGGRLISLFS-----ALNYEGHKNNSSVLKLEFVGQR 259
Query: 336 IKQQQILHLLR 304
+K +Q+L+ R
Sbjct: 260 VKVKQVLYRCR 270
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 625 EKSTNKENKITITNDKGRLSKEE-IERMVNEAEKYRNEDDKQKETIQAKNALE 780
EK K+ +K R+ KEE I++ V EAEK + E+ +++ KN E
Sbjct: 251 EKIKKKDEDEKAKKEKERIDKEEKIKKEVEEAEKKKKEEKEKRRKEVKKNREE 303
>AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily
assigned gene nameprotein 63 protein.
Length = 604
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 667 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAK 768
D+ L +EEIER+ E ++ +NE K + +QA+
Sbjct: 23 DESFLDEEEIERIKEELQRVQNEKKKHIQRMQAR 56
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 583 FDI-DANGILN--VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQK 750
FDI + G L ++ IEK + N++ T + + E +N+ E +YRN +D +
Sbjct: 1657 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQ 1716
Query: 751 ETIQAKNALES 783
+ + + ALES
Sbjct: 1717 DAEEERRALES 1727
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 583 FDI-DANGILN--VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQK 750
FDI + G L ++ IEK + N++ T + + E +N+ E +YRN +D +
Sbjct: 1730 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQ 1789
Query: 751 ETIQAKNALES 783
+ + + ALES
Sbjct: 1790 DAEEERRALES 1800
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 583 FDI-DANGILN--VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQK 750
FDI + G L ++ IEK + N++ T + + E +N+ E +YRN +D +
Sbjct: 1730 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQ 1789
Query: 751 ETIQAKNALES 783
+ + + ALES
Sbjct: 1790 DAEEERRALES 1800
>Z81118-2|CAB03324.2| 318|Caenorhabditis elegans Hypothetical
protein T10G3.1 protein.
Length = 318
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 562 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKY----R 729
VP+ E DID + + A E + N+E + +K +LS E IE++ E Y R
Sbjct: 185 VPKFEG--DIDEDDLPPPPATEDTENEEPEEECLANKEKLSDEVIEKLQAETTMYYRLVR 242
Query: 730 NEDDKQKE 753
+++QKE
Sbjct: 243 QRNEQQKE 250
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +1
Query: 625 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR----NEDDKQKETIQAKNALESYCF 792
E N E +T + R KEE++ + E+Y+ NE D +KE + N L + C
Sbjct: 38 EMCQNYEVNLTALQENERKLKEEVKAAMELNERYQLDLSNERDYRKELEKKMNELSTNCL 97
Query: 793 S 795
+
Sbjct: 98 N 98
>Z92849-8|CAB07427.3| 523|Caenorhabditis elegans Hypothetical
protein H12D21.10 protein.
Length = 523
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = -1
Query: 327 QQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEILQELLHLGDTSGATHQYN 151
Q ILH L + + L+ I L R F ++L+IKEIL+ L HL + S YN
Sbjct: 327 QFILHRLG-IRQPKADLEKARIVI-LSRSTAFRKILNIKEILRSLGHLPNVSTRVVDYN 383
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +1
Query: 625 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAK 768
EK +E K ++K KE+ + N+ +K +++DDK++E+ + K
Sbjct: 77 EKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDK 124
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 604 ILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK---QKETIQAKNA 774
+++ +A+E + D+ +K E+E + EAEK ++E ++ +E + A N
Sbjct: 143 LMDEAALEGEKGNVDAAQTAVDRADKAKVEVEELTQEAEKLKSEKERAINMEENVTAGNR 202
Query: 775 LESYC 789
C
Sbjct: 203 QMQVC 207
>Z99281-44|CAJ76963.1| 96|Caenorhabditis elegans Hypothetical
protein Y57G11C.52 protein.
Length = 96
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 655 TITNDKGRLSKEEIERMVNEAEKYR 729
T N G LSKEE++ M++E+ K R
Sbjct: 70 TCVNGLGCLSKEEVQMMIDESNKPR 94
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 658 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALES 783
+ + G LSKEE + + + +NE+ + +E I+ KNA S
Sbjct: 1 MATESGGLSKEEFLLVQEQLLQLKNENYELREEIKKKNAAAS 42
>U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical
protein T06C10.3 protein.
Length = 557
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 622 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 744
++ TN + I +T LSK +I+ M+NEA RN + K
Sbjct: 284 LKDGTNVDVAIKMTKVSAFLSKMKIKEMMNEARFIRNFNHK 324
>L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical
protein F42H10.7b protein.
Length = 531
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 172 WSHPPVQYRGFEPYPSWHHGETSPLAPW 89
WS P R P +W G T+P + W
Sbjct: 463 WSRPSSSKRSTTPGSAWSRGSTTPGSSW 490
>L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical
protein F42H10.7a protein.
Length = 529
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 172 WSHPPVQYRGFEPYPSWHHGETSPLAPW 89
WS P R P +W G T+P + W
Sbjct: 461 WSRPSSSKRSTTPGSAWSRGSTTPGSSW 488
>AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical
protein W03F8.2 protein.
Length = 448
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 622 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 744
++ TN + I +T LSK +I+ M+NEA RN + K
Sbjct: 340 LKDGTNVDVAIKMTKVSAFLSKMKIKEMMNEARFIRNFNHK 380
>AC024819-2|AAF59588.1| 71|Caenorhabditis elegans Hypothetical
protein Y55B1AL.2 protein.
Length = 71
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -1
Query: 252 LVRVNRFVELLSIKEILQELLHLGDTSGATHQYNIVDLSLIHLGITERLLHWLHGRPEQI 73
+V V + V + S Q L+HL D+ ++ + +L HL I + ++ L + EQI
Sbjct: 1 MVNVKKGVLVTSDPAFRQLLIHLDDSRQLGSKFIVRELDDTHLFIEKEIVPMLENKVEQI 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.133 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,223,866
Number of Sequences: 27780
Number of extensions: 355849
Number of successful extensions: 1278
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -