Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0593
(798 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 23 2.5
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 23 3.3
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 3.3
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 4.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 5.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 5.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 5.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 5.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 5.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 5.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 7.6
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 23.4 bits (48), Expect = 2.5
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 495 STLTLKYLDEY-SGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCY 337
+ L ++ +D SG +I G+ + +++ +G L +S S+NT+ G Y
Sbjct: 330 NALEMRLMDAIDSGYLIDEYGKKIDIYTPEGLNMLGNVIEGSSDSINTKFYGMY 383
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 443 TLITNPEYSSKYLR 484
T I N YSSKY+R
Sbjct: 199 TYIVNTNYSSKYMR 212
Score = 23.0 bits (47), Expect = 3.3
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 495 STLTLKYLDEY-SGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCY 337
+ L ++ +D SG +I G+ + +++ +G L S S+NT+ G Y
Sbjct: 330 NALEMRLMDAIDSGYLIDEYGKKIDIYTPEGLNMLGNVIEGNSDSINTKFYGMY 383
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.0 bits (47), Expect = 3.3
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = -1
Query: 468 EYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQ 289
E+ G+ +G ++L SG+ LD GH ++ ++ +G +I +L + V+
Sbjct: 174 EFGGITQCIGAFDVTLESGERVTFLDTPGH--AAFISMRHRGAHITDIVVLVVAADDGVK 231
Query: 288 DSSLDS 271
+ +L S
Sbjct: 232 EQTLQS 237
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 22.6 bits (46), Expect = 4.3
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 145 HDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 252
+D ++VGG V L + N K L PDE
Sbjct: 69 YDFIVVGGGAARAVVAGRLSEVSNWKVLLLEAGPDE 104
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 657 HYQRQRSSLQGRDRAY 704
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 657 HYQRQRSSLQGRDRAY 704
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 657 HYQRQRSSLQGRDRAY 704
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 657 HYQRQRSSLQGRDRAY 704
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 657 HYQRQRSSLQGRDRAY 704
HY R+RS + R+R Y
Sbjct: 219 HYSRERSCSRDRNREY 234
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 657 HYQRQRSSLQGRDRAY 704
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 7.6
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 597 QRYPQRFRYREVHQ-QGEQDHHYQRQRSSLQGRDR 698
+RY R R RE + + E+++ R+RS + RDR
Sbjct: 270 KRY-SRSREREQNSYKNEREYRKYRERSKERSRDR 303
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.312 0.133 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,956
Number of Sequences: 438
Number of extensions: 4570
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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