Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0592
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   5.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.6  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   7.4  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   7.4  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   7.4  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   7.4  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   7.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.8  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 191 CKTKDRGSC 165
           CK KD GSC
Sbjct: 74  CKAKDEGSC 82


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 191 CKTKDRGSC 165
           CK KD GSC
Sbjct: 74  CKAKDEGSC 82


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 213 LWAQIKLYLNRAFQVLGL 266
           LWA+ + Y     QVLGL
Sbjct: 224 LWARSRRYTTELGQVLGL 241


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 213 LWAQIKLYLNRAFQVLGL 266
           LWA+ + Y     QVLGL
Sbjct: 224 LWARSRRYTTELGQVLGL 241


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 213 LWAQIKLYLNRAFQVLGL 266
           LWA+ + Y     QVLGL
Sbjct: 224 LWARSRRYTTELGQVLGL 241


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 213 LWAQIKLYLNRAFQVLGL 266
           LWA+ + Y     QVLGL
Sbjct: 224 LWARSRRYTTELGQVLGL 241


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 213 LWAQIKLYLNRAFQVLGL 266
           LWA+ + Y     QVLGL
Sbjct: 223 LWARSRRYTTELGQVLGL 240


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 193 LVKQRTAGAVIEIYLIII 140
           LVK   AGA++   L++I
Sbjct: 563 LVKSHIAGAIVTYELVVI 580


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,535
Number of Sequences: 336
Number of extensions: 3168
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)