Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0589
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   2.5  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   2.5  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        24   4.4  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    24   4.4  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   5.8  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 245 KHTETCEKNPLPTKDVIEQEKS 310
           K+T TCE   LP +DV+  + S
Sbjct: 477 KNTTTCEDYALPYQDVVPSDPS 498


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 337 TRKCISLVSPYFNIDVSQIDLRRPLQVLFLFLYN 438
           TR C+  +     +D S   + R +Q L ++LYN
Sbjct: 133 TRLCLPQIFNNILMDFSVEQINRSIQELMIYLYN 166


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 57  QTEAQSFHWCRRHGD 13
           QT +Q+ HW + HGD
Sbjct: 222 QTLSQANHWLKSHGD 236


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 12/49 (24%), Positives = 28/49 (57%)
 Frame = +3

Query: 75  EKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNNS*TAS 221
           E+T+KSL + +E    ++      + +N    ++A +A++ KN++ + S
Sbjct: 148 ERTEKSLKEALEGCSQTETPVNGKRGRNLRSTEEADDAKRAKNDAPSGS 196


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -1

Query: 114 TSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGDSWCC 1
           TS   R+   GS      Q ++    +WC   G+ W C
Sbjct: 379 TSAEGRLNADGSGDHGLFQISD---IYWCSPPGNGWAC 413


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,311
Number of Sequences: 2352
Number of extensions: 13159
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)