Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0584
         (707 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008430-1|AAH08430.1|  205|Homo sapiens family with sequence si...    76   1e-13
AF223467-1|AAF64142.1|  205|Homo sapiens NPD008 protein protein.       73   1e-12
AF151906-1|AAD34143.1|  181|Homo sapiens CGI-148 protein protein.      73   1e-12
AB074181-1|BAE45741.1|  164|Homo sapiens putative protein produc...    69   2e-11
BC011952-1|AAH11952.1|  276|Homo sapiens family with sequence si...    68   3e-11

>BC008430-1|AAH08430.1|  205|Homo sapiens family with sequence
           similarity 18, member B protein.
          Length = 205

 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
 Frame = +2

Query: 326 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVIL 493
           +D ++   EE+  N+    +  HP   FFHL FR SAIIVY+LCG  S SFI   V +IL
Sbjct: 11  EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCGLLSSSFITCMVTIIL 70

Query: 494 LLSADFWTVKNI 529
           LLS DFW VKN+
Sbjct: 71  LLSCDFWAVKNV 82



 Score = 64.1 bits (149), Expect = 5e-10
 Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 6/61 (9%)
 Frame = +3

Query: 531 SGRLLVGLRWWNYVDDNGKSPWVFEARQSRVNRN------ESRLFWDGPDAVPLGLVHFF 692
           +GRL+VGLRWWN++D++GKS WVFE+R+     N      ESR+FW G  A P+  V F 
Sbjct: 83  TGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLGLIACPVLWVIFA 142

Query: 693 Y 695
           +
Sbjct: 143 F 143


>AF223467-1|AAF64142.1|  205|Homo sapiens NPD008 protein protein.
          Length = 205

 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
 Frame = +2

Query: 326 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVIL 493
           +D ++   EE+  N+    +  HP   FFHL FR SAIIVY+LC   S SFI   V +IL
Sbjct: 11  EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIIL 70

Query: 494 LLSADFWTVKNI 529
           LLS DFW VKN+
Sbjct: 71  LLSCDFWAVKNV 82



 Score = 64.1 bits (149), Expect = 5e-10
 Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 6/61 (9%)
 Frame = +3

Query: 531 SGRLLVGLRWWNYVDDNGKSPWVFEARQSRVNRN------ESRLFWDGPDAVPLGLVHFF 692
           +GRL+VGLRWWN++D++GKS WVFE+R+     N      ESR+FW G  A P+  V F 
Sbjct: 83  TGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLGLIACPVLWVIFA 142

Query: 693 Y 695
           +
Sbjct: 143 F 143


>AF151906-1|AAD34143.1|  181|Homo sapiens CGI-148 protein protein.
          Length = 181

 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
 Frame = +2

Query: 326 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVIL 493
           +D ++   EE+  N+    +  HP   FFHL FR SAIIVY+LC   S SFI   V +IL
Sbjct: 11  EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIIL 70

Query: 494 LLSADFWTVKNI 529
           LLS DFW VKN+
Sbjct: 71  LLSCDFWAVKNV 82



 Score = 64.1 bits (149), Expect = 5e-10
 Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 6/61 (9%)
 Frame = +3

Query: 531 SGRLLVGLRWWNYVDDNGKSPWVFEARQSRVNRN------ESRLFWDGPDAVPLGLVHFF 692
           +GRL+VGLRWWN++D++GKS WVFE+R+     N      ESR+FW G  A P+  V F 
Sbjct: 83  TGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLGLIACPVLWVIFA 142

Query: 693 Y 695
           +
Sbjct: 143 F 143


>AB074181-1|BAE45741.1|  164|Homo sapiens putative protein product
           of Nbla10383 protein.
          Length = 164

 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
 Frame = +2

Query: 326 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVIL 493
           +D ++   EE+  N+    +  HP   FFHL FR SAIIV +LC   S SFI   V +IL
Sbjct: 11  EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSSFITCMVTIIL 70

Query: 494 LLSADFWTVKNI 529
           LLS DFW VKN+
Sbjct: 71  LLSCDFWAVKNV 82



 Score = 59.7 bits (138), Expect = 1e-08
 Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 6/48 (12%)
 Frame = +3

Query: 531 SGRLLVGLRWWNYVDDNGKSPWVFEARQSRVNRN------ESRLFWDG 656
           +GRL+VGLRWWN++D++GK  WVFE+R+     N      ESR+FW G
Sbjct: 83  TGRLMVGLRWWNHIDEDGKGHWVFESRKESSQENKTVSEAESRIFWLG 130


>BC011952-1|AAH11952.1|  276|Homo sapiens family with sequence
           similarity 18, member B2 protein.
          Length = 276

 Score = 68.1 bits (159), Expect = 3e-11
 Identities = 38/76 (50%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
 Frame = +2

Query: 326 DDDTIAFG----EEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFV 481
           +DDT A      EE+  N+    +  HP   FFHL FR SAIIV +LC   S SFI   V
Sbjct: 7   NDDTEAVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSSFITCMV 66

Query: 482 LVILLLSADFWTVKNI 529
            +ILLLS DFW VKN+
Sbjct: 67  TIILLLSCDFWAVKNV 82



 Score = 61.3 bits (142), Expect = 3e-09
 Identities = 26/48 (54%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
 Frame = +3

Query: 531 SGRLLVGLRWWNYVDDNGKSPWVFEARQSRVNRN------ESRLFWDG 656
           +GRL+VGLRWWN++D++GKS WVFE+R+     N      ESR+FW G
Sbjct: 83  TGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLG 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,666,226
Number of Sequences: 237096
Number of extensions: 2295399
Number of successful extensions: 8266
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8260
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)