Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0580
         (742 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    27   0.46 
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    27   0.61 
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    25   3.2  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     24   5.7  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    24   5.7  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   7.5  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 407 SMTAADSSSISNPHSEAISLYTSPAAAL-PAIRRFPPSSMNLVMASLSTCPPNSST 243
           S + A  +S+   H+E     T P AAL PA    P ++ NL +       PNSST
Sbjct: 22  STSPAAMASLVLDHTELPLAGTIPPAALMPARVLLPSNATNLTLTLEELLRPNSST 77


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 302 PSSMNLVMASLSTCPPNSSTEGANTMRFLYKYS 204
           PS +++  AS S C P+ +   A   R L +YS
Sbjct: 169 PSRIDVAFASPSICRPDLAANSATCWRILSRYS 201


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 508 TQPLLFEGTGLIVDKDNSLVLPILSADSTAYSY 606
           TQP   EG  + ++ D  L++PI +    A  Y
Sbjct: 384 TQPYKVEGANVSLEPDTMLMIPIYAIHHDASIY 416


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -2

Query: 396 CRFLVHLKSTF*SDFSIYVSGRGVTSHKKVSAIVYEFGYGLT 271
           C FL+ +     S  S+   G    S  + SAIVY   Y LT
Sbjct: 78  CAFLLLVLYISSSPSSLLSDGPRTNSFLRTSAIVYNHTYPLT 119


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -3

Query: 368 HSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTE 240
           H E ++L+   AAAL    +  P + ++   + +  PP++S+E
Sbjct: 105 HQETMTLWREVAAALDGKAKCRPRTPSM-RVNCTNIPPDTSSE 146


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 305 PPSSMNLVMASLSTCPPNSSTEGANTMRFLYKYSPY 198
           P SS+++ ++ + +C P++  E    +    K  PY
Sbjct: 242 PGSSLSVGVSGVGSCTPSNPLEWTGNVTVRKKRKPY 277


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.135    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,458
Number of Sequences: 2352
Number of extensions: 15717
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)