Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0580
         (742 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X81999-1|CAA57525.1|  449|Drosophila melanogaster oligosaccharyl...   297   1e-80
BT010050-1|AAQ22519.1|  449|Drosophila melanogaster LD21941p pro...   295   4e-80
AE014298-1289|AAF46453.1|  449|Drosophila melanogaster CG9022-PA...   295   4e-80
X81207-1|CAA57079.1|  330|Drosophila melanogaster oligosaccharyl...   177   1e-44
AE013599-878|AAM71069.2| 2172|Drosophila melanogaster CG1884-PA,...    29   6.6  
AE013599-877|AAF58926.2| 2170|Drosophila melanogaster CG1884-PB,...    29   6.6  

>X81999-1|CAA57525.1|  449|Drosophila melanogaster
           oligosaccharyltransferase subunit protein.
          Length = 449

 Score =  297 bits (729), Expect = 1e-80
 Identities = 143/219 (65%), Positives = 174/219 (79%), Gaps = 4/219 (1%)
 Frame = +1

Query: 64  DHETLVLIDNLNIKETHSQFFKSLQERGYGLTFKLADDANLVLSKYGEYLYKNLIVFAPS 243
           D  TLVL+DNL I+ETHS FFKSLQ+RG+ LT+KLADD++L+LSKYGEYLYKN+I+FAPS
Sbjct: 23  DANTLVLLDNLAIRETHSIFFKSLQDRGFKLTYKLADDSSLLLSKYGEYLYKNVIIFAPS 82

Query: 244 VLEFGGQVDSEAITKFIDDXXXXXXXXXXXXXDVYREIASECGFEMDEESAAVIDHFNYD 423
           V EFGG V  EA+ +F+DD             D  RE ASECGFE+DEE+AAVIDH +YD
Sbjct: 83  VEEFGGDVSVEALAQFVDDGGNVLVAGSEKSGDALREFASECGFELDEENAAVIDHLHYD 142

Query: 424 VTDEGDHTRIVVSPKNLIKAPTIVGEQNTQ----PLLFEGTGLIVDKDNSLVLPILSADS 591
           V+D G+HT I+ S KNLI+A TIVG+ N Q    PLL+ GTGLI DK+N LVL +L+A+S
Sbjct: 143 VSDAGEHTTILTSAKNLIQADTIVGKANRQADAAPLLYRGTGLIADKENPLVLKLLTAES 202

Query: 592 TAYSYNPKSQVKEYPHAVGRKTVLIAALQARNNARIVFS 708
           TAYSYNP++ V +YPHAVGR T+LIAALQARNNAR+VFS
Sbjct: 203 TAYSYNPEASVSDYPHAVGRGTLLIAALQARNNARVVFS 241


>BT010050-1|AAQ22519.1|  449|Drosophila melanogaster LD21941p
           protein.
          Length = 449

 Score =  295 bits (724), Expect = 4e-80
 Identities = 142/219 (64%), Positives = 173/219 (78%), Gaps = 4/219 (1%)
 Frame = +1

Query: 64  DHETLVLIDNLNIKETHSQFFKSLQERGYGLTFKLADDANLVLSKYGEYLYKNLIVFAPS 243
           D  TLVL+DNL I+ETHS FFKSLQ+RG+ LT+KLADD++L+LSKYGEYLYKN+I+FAPS
Sbjct: 23  DANTLVLLDNLAIRETHSIFFKSLQDRGFKLTYKLADDSSLLLSKYGEYLYKNVIIFAPS 82

Query: 244 VLEFGGQVDSEAITKFIDDXXXXXXXXXXXXXDVYREIASECGFEMDEESAAVIDHFNYD 423
           V EFGG V  E + +F+DD             D  RE ASECGFE+DEE+AAVIDH +YD
Sbjct: 83  VEEFGGDVSVERLAQFVDDGGNVLVAGSEKSGDALREFASECGFELDEENAAVIDHLHYD 142

Query: 424 VTDEGDHTRIVVSPKNLIKAPTIVGEQNTQ----PLLFEGTGLIVDKDNSLVLPILSADS 591
           V+D G+HT I+ S KNLI+A TIVG+ N Q    PLL+ GTGLI DK+N LVL +L+A+S
Sbjct: 143 VSDAGEHTTILTSAKNLIQADTIVGKANRQADAAPLLYRGTGLIADKENPLVLKLLTAES 202

Query: 592 TAYSYNPKSQVKEYPHAVGRKTVLIAALQARNNARIVFS 708
           TAYSYNP++ V +YPHAVGR T+LIAALQARNNAR+VFS
Sbjct: 203 TAYSYNPEASVSDYPHAVGRGTLLIAALQARNNARVVFS 241


>AE014298-1289|AAF46453.1|  449|Drosophila melanogaster CG9022-PA
           protein.
          Length = 449

 Score =  295 bits (724), Expect = 4e-80
 Identities = 142/219 (64%), Positives = 173/219 (78%), Gaps = 4/219 (1%)
 Frame = +1

Query: 64  DHETLVLIDNLNIKETHSQFFKSLQERGYGLTFKLADDANLVLSKYGEYLYKNLIVFAPS 243
           D  TLVL+DNL I+ETHS FFKSLQ+RG+ LT+KLADD++L+LSKYGEYLYKN+I+FAPS
Sbjct: 23  DANTLVLLDNLAIRETHSIFFKSLQDRGFKLTYKLADDSSLLLSKYGEYLYKNVIIFAPS 82

Query: 244 VLEFGGQVDSEAITKFIDDXXXXXXXXXXXXXDVYREIASECGFEMDEESAAVIDHFNYD 423
           V EFGG V  E + +F+DD             D  RE ASECGFE+DEE+AAVIDH +YD
Sbjct: 83  VEEFGGDVSVERLAQFVDDGGNVLVAGSEKSGDALREFASECGFELDEENAAVIDHLHYD 142

Query: 424 VTDEGDHTRIVVSPKNLIKAPTIVGEQNTQ----PLLFEGTGLIVDKDNSLVLPILSADS 591
           V+D G+HT I+ S KNLI+A TIVG+ N Q    PLL+ GTGLI DK+N LVL +L+A+S
Sbjct: 143 VSDAGEHTTILTSAKNLIQADTIVGKANRQADAAPLLYRGTGLIADKENPLVLKLLTAES 202

Query: 592 TAYSYNPKSQVKEYPHAVGRKTVLIAALQARNNARIVFS 708
           TAYSYNP++ V +YPHAVGR T+LIAALQARNNAR+VFS
Sbjct: 203 TAYSYNPEASVSDYPHAVGRGTLLIAALQARNNARVVFS 241


>X81207-1|CAA57079.1|  330|Drosophila melanogaster
           oligosaccharyltransferase 48kDasubunit protein.
          Length = 330

 Score =  177 bits (431), Expect = 1e-44
 Identities = 85/122 (69%), Positives = 102/122 (83%), Gaps = 3/122 (2%)
 Frame = +1

Query: 352 EIASECGFEMDEESAAVIDHFNYDVTDEGDHTRIVVSPKNLIKAPTIVGEQNTQ---PLL 522
           E ASECGFE+DEE+AAVIDH +YDV+D GD T I+ S KNLI+A TIVG+ N Q   PLL
Sbjct: 1   EFASECGFELDEENAAVIDHLHYDVSDAGDDTTILTSAKNLIQADTIVGKANRQADRPLL 60

Query: 523 FEGTGLIVDKDNSLVLPILSADSTAYSYNPKSQVKEYPHAVGRKTVLIAALQARNNARIV 702
           + GTGLI DK+N LVL +L+A+STAYSYNP++ V +YPHAVGR TV+IAALQARNNAR+V
Sbjct: 61  YRGTGLIADKENPLVLKLLTAESTAYSYNPEASVSDYPHAVGRGTVVIAALQARNNARVV 120

Query: 703 FS 708
           FS
Sbjct: 121 FS 122


>AE013599-878|AAM71069.2| 2172|Drosophila melanogaster CG1884-PA,
           isoform A protein.
          Length = 2172

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -2

Query: 705 ENNTSIVSCLQSCNQYCLTANCMGVLFHLTLRVVTVGSR 589
           E  T++++CLQ+C   C+    + V+  +T  V  + ++
Sbjct: 388 ETVTTMINCLQTCINNCMQPEMVEVIMQMTANVAIMANK 426


>AE013599-877|AAF58926.2| 2170|Drosophila melanogaster CG1884-PB,
           isoform B protein.
          Length = 2170

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -2

Query: 705 ENNTSIVSCLQSCNQYCLTANCMGVLFHLTLRVVTVGSR 589
           E  T++++CLQ+C   C+    + V+  +T  V  + ++
Sbjct: 388 ETVTTMINCLQTCINNCMQPEMVEVIMQMTANVAIMANK 426


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.135    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,454,079
Number of Sequences: 53049
Number of extensions: 694995
Number of successful extensions: 2012
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2006
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)