Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0576
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   0.83 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   1.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   2.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   4.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.8  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 0.83
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 43  WIFRHNNIVTVNLHLYFF 96
           W+     +VTV+LH++FF
Sbjct: 106 WVLLGVMVVTVDLHVFFF 123


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +3

Query: 495 EPSTSNAKTSSGNANNASSY 554
           +PSTSN +  + N NN++++
Sbjct: 368 QPSTSNNRWHNNNGNNSNNH 387


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 286 TSHSPPKHGCRVHPEP 333
           + H P KHG   H EP
Sbjct: 104 SQHCPRKHGYFAHEEP 119


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 498 PSTSNAKTSSGNANNASS 551
           PS +N  TSS N+N  +S
Sbjct: 426 PSNTNTSTSSTNSNKPNS 443


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 46  IFRHNNIVTVNLHLYFFWT 102
           IF+   + T+NL + F WT
Sbjct: 208 IFKALVLQTINLQITFIWT 226


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 46  IFRHNNIVTVNLHLYFFWT 102
           IF+   + T+NL + F WT
Sbjct: 208 IFKALVLQTINLQITFIWT 226


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 64  CCYDEISNANGVALFQLLG 8
           CC + +S  NG  L+ + G
Sbjct: 252 CCLETVSALNGAFLYTING 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,516
Number of Sequences: 336
Number of extensions: 2526
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)