Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0576
         (589 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11837-1|CAA72535.1|  729|Drosophila melanogaster bZIP transcrip...    37   0.023
BT030402-1|ABO52821.1|  610|Drosophila melanogaster FI01009p pro...    37   0.023
AY113444-1|AAM29449.1|  596|Drosophila melanogaster RE29005p pro...    37   0.023
AE014134-906|AAN10539.1|  610|Drosophila melanogaster CG14029-PC...    37   0.023
AE014134-905|AAF52237.1|  729|Drosophila melanogaster CG14029-PA...    37   0.023

>Y11837-1|CAA72535.1|  729|Drosophila melanogaster bZIP
           transcription factor protein.
          Length = 729

 Score = 36.7 bits (81), Expect = 0.023
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = +2

Query: 458 PSNGSSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKK 568
           PS G +G      A    +K+ F QRKQREF PD+KK
Sbjct: 205 PSQGGNGPQ---SALTAAQKELFSQRKQREFTPDNKK 238


>BT030402-1|ABO52821.1|  610|Drosophila melanogaster FI01009p
           protein.
          Length = 610

 Score = 36.7 bits (81), Expect = 0.023
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = +2

Query: 458 PSNGSSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKK 568
           PS G +G      A    +K+ F QRKQREF PD+KK
Sbjct: 86  PSQGGNGPQ---SALTAAQKELFSQRKQREFTPDNKK 119


>AY113444-1|AAM29449.1|  596|Drosophila melanogaster RE29005p
           protein.
          Length = 596

 Score = 36.7 bits (81), Expect = 0.023
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = +2

Query: 458 PSNGSSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKK 568
           PS G +G      A    +K+ F QRKQREF PD+KK
Sbjct: 86  PSQGGNGPQ---SALTAAQKELFSQRKQREFTPDNKK 119


>AE014134-906|AAN10539.1|  610|Drosophila melanogaster CG14029-PC,
           isoform C protein.
          Length = 610

 Score = 36.7 bits (81), Expect = 0.023
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = +2

Query: 458 PSNGSSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKK 568
           PS G +G      A    +K+ F QRKQREF PD+KK
Sbjct: 86  PSQGGNGPQ---SALTAAQKELFSQRKQREFTPDNKK 119


>AE014134-905|AAF52237.1|  729|Drosophila melanogaster CG14029-PA,
           isoform A protein.
          Length = 729

 Score = 36.7 bits (81), Expect = 0.023
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = +2

Query: 458 PSNGSSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKK 568
           PS G +G      A    +K+ F QRKQREF PD+KK
Sbjct: 205 PSQGGNGPQ---SALTAAQKELFSQRKQREFTPDNKK 238


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,897,286
Number of Sequences: 53049
Number of extensions: 462898
Number of successful extensions: 1415
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)