Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0575
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    28   0.28 
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       27   0.37 
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    24   3.4  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             24   4.5  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 27.9 bits (59), Expect = 0.28
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = +2

Query: 224 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGP 367
           +F E  +L D ++DG +   +L  +  +LG    + ELD ++ +   P
Sbjct: 86  DFLECLKLYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMKDCMDP 133


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 27.5 bits (58), Expect = 0.37
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +2

Query: 533 DEVDEAYDQMD--IDDKGYIDTTKL 601
           DE+D+   + D  IDDK Y+D TK+
Sbjct: 158 DEIDDENPKFDKNIDDKEYVDPTKI 182


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 256 RQGWHHRQERLARHLRLPGQ 315
           RQ W  +Q++  R  RLP Q
Sbjct: 191 RQRWRQQQQKQQRQQRLPAQ 210


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 350 GEASGPINFTQLLTLFANRMSGGSDEDDVVI 442
           G  +G I++ Q      N    G  EDDVVI
Sbjct: 23  GNPNGTISYNQKRVYIFNEDLSGGLEDDVVI 53


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,928
Number of Sequences: 2352
Number of extensions: 7519
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)