Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0574
         (614 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9RJR0 Cluster: Putative glycerone kinase; n=1; Strepto...    33   5.4  
UniRef50_A2YTD2 Cluster: Putative uncharacterized protein; n=3; ...    33   5.4  
UniRef50_Q6EMI6 Cluster: TSES33; n=1; Taenia solium|Rep: TSES33 ...    33   7.1  
UniRef50_Q63064 Cluster: CAMPATH-1 antigen precursor; n=3; Rattu...    33   7.1  

>UniRef50_Q9RJR0 Cluster: Putative glycerone kinase; n=1;
           Streptomyces coelicolor|Rep: Putative glycerone kinase -
           Streptomyces coelicolor
          Length = 593

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 196 DASSDVAGRDMLLLRDEAVEDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFV 357
           D ++  AG+D    +D AV DA+ SGT  +P   +   RA+   +  +   A V
Sbjct: 344 DRAAATAGQDTAAAQDTAVSDAAASGTTAVPVASDASRRAAGTVLAALDAVARV 397


>UniRef50_A2YTD2 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 309

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
 Frame = -1

Query: 434 RKLLKLHKNQTCFNKNRT---HER-HAQKETKAQRGIVFIVLALALGRGLPGFGNTAVP 270
           R+L K +  Q  F  ++    H+  H ++ + A+RG      A A GRGL GFG+  VP
Sbjct: 108 RRLFKCNYCQRKFYTSQALGGHQNAHKRERSLAKRGAAVAAAAAAAGRGLYGFGDPFVP 166


>UniRef50_Q6EMI6 Cluster: TSES33; n=1; Taenia solium|Rep: TSES33 -
           Taenia solium (Pork tapeworm)
          Length = 267

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +1

Query: 148 KVWGIFFCYVTEGDLVDASSDVAGRDMLLLRDEAVEDASPSGTAVLPNPGNPRPRASAKT 327
           + WG   C VT  D+    +DV  +D+LLL D  +     S T  +P+   P+P      
Sbjct: 72  RTWGSP-CRVTGNDVYITMADVKAQDILLLSDAQLTRGMASTTFFVPHCKFPKPAKDGVD 130

Query: 328 IKT-IPRCAFV 357
           + T  P   FV
Sbjct: 131 LNTSFPFSRFV 141


>UniRef50_Q63064 Cluster: CAMPATH-1 antigen precursor; n=3; Rattus
           norvegicus|Rep: CAMPATH-1 antigen precursor - Rattus
           norvegicus (Rat)
          Length = 96

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +1

Query: 247 AVEDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFVSFCAWRSCVRFL 393
           A   A+ + TAV   PG P P+A A +I  +  C F+ F     C+ +L
Sbjct: 48  AATTATKTTTAVRKTPGKP-PKAGASSITDVGACTFLFFANTLMCLFYL 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,582,626
Number of Sequences: 1657284
Number of extensions: 11139936
Number of successful extensions: 30623
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30612
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)