Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0573
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.8  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    25   2.4  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   2.4  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   3.1  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     24   5.5  
AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    23   7.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   7.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 234 PGAAAAQSTPPPPKHAPQVCPR 299
           PGAAAA + PPPP H  +  P+
Sbjct: 910 PGAAAA-TGPPPPTHRLEQPPQ 930


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 240 AAAAQSTPPPPKHAPQVCPRQCSCGAEPRI 329
           +A A+    P   AP  C R C  G  PRI
Sbjct: 134 SATAELRRNPSLSAPDECARACREGEPPRI 163


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 240 AAAAQSTPPPPKHAPQVCPRQCSCGAEPRI 329
           +A A+    P   AP  C R C  G  PRI
Sbjct: 134 SATAELRRNPSLSAPDECARACREGEPPRI 163


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +3

Query: 219 WDYFEPGAAAAQSTPPPPKHAPQ 287
           W+ F    A     PPPP   PQ
Sbjct: 363 WNRFTQSTAMHNQPPPPPYQPPQ 385


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = -3

Query: 139 SELRNTSL*SSGRIRPASGSLTSPASLLTPHS 44
           S+ +NTS  ++ + + + G++ SPA+ + P S
Sbjct: 81  SQTQNTSSSNASQQQSSGGAVVSPATQIVPPS 112


>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -3

Query: 562 CIGGSQLISWGLKGKDPSTQKFGRSIIVCQSETSLPAL 449
           C+  S  I   ++G   ST K   +++ C+S+ +LP L
Sbjct: 2   CVENSLTIMLAVRGALFSTAKNCSAVLGCRSKHTLPDL 39


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 75   VSEPEAGRMRPEDYRLVFLSSDSS 146
            +SE EAGR R   Y   F  SDSS
Sbjct: 1901 ISEQEAGRQRYNYYYKDFDLSDSS 1924


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,900
Number of Sequences: 2352
Number of extensions: 12754
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)