BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0573
(723 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025937-1|ABG02181.1| 520|Drosophila melanogaster IP13955p pro... 75 1e-13
AY229971-1|AAP04482.1| 1517|Drosophila melanogaster bitesize iso... 75 1e-13
AY229970-1|AAP04481.1| 2645|Drosophila melanogaster bitesize iso... 75 1e-13
AY229969-1|AAP04480.1| 1102|Drosophila melanogaster bitesize iso... 75 1e-13
AE014297-1905|AAX52955.1| 1517|Drosophila melanogaster CG33555-P... 75 1e-13
AE014297-1904|AAX52954.1| 2645|Drosophila melanogaster CG33555-P... 75 1e-13
AE014297-1903|AAX52953.1| 1102|Drosophila melanogaster CG33555-P... 75 1e-13
AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-P... 75 1e-13
AY069683-1|AAL39828.1| 993|Drosophila melanogaster LD45449p pro... 30 2.8
AE014298-2035|AAF48374.1| 993|Drosophila melanogaster CG9411-PA... 30 2.8
AY069850-1|AAL39995.1| 755|Drosophila melanogaster SD09792p pro... 30 3.7
AE014297-3575|AAN14003.1| 755|Drosophila melanogaster CG13624-P... 30 3.7
AE014297-3574|AAN14002.1| 755|Drosophila melanogaster CG13624-P... 30 3.7
AE014297-3573|AAN14001.1| 755|Drosophila melanogaster CG13624-P... 30 3.7
AE014297-3572|AAF56314.2| 755|Drosophila melanogaster CG13624-P... 30 3.7
AE014297-3571|ABI31204.1| 814|Drosophila melanogaster CG13624-P... 30 3.7
AE014297-3570|ABI31203.1| 814|Drosophila melanogaster CG13624-P... 30 3.7
AY122212-1|AAM52724.1| 658|Drosophila melanogaster LP07906p pro... 29 4.8
AY071192-1|AAL48814.1| 689|Drosophila melanogaster RE24065p pro... 29 4.8
AE014298-2877|AAF48974.1| 348|Drosophila melanogaster CG14218-P... 29 4.8
AE014297-1097|AAF54497.1| 689|Drosophila melanogaster CG6217-PA... 29 4.8
AE014296-3604|AAF51767.2| 706|Drosophila melanogaster CG32447-P... 29 4.8
AE014296-3603|AAS65094.1| 658|Drosophila melanogaster CG32447-P... 29 4.8
>BT025937-1|ABG02181.1| 520|Drosophila melanogaster IP13955p
protein.
Length = 520
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +3
Query: 396 RLSLGTGTYMGANVNWMDSAGKEVSLWQTMMERPNFWVEGSLPLRPQL 539
R SLGTG G V WMD+ GKE+SLWQ M++RPNFWVEGSL LR L
Sbjct: 465 RFSLGTGRSYGRQVEWMDATGKELSLWQNMLDRPNFWVEGSLVLRSSL 512
>AY229971-1|AAP04482.1| 1517|Drosophila melanogaster bitesize isoform
3 protein.
Length = 1517
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +3
Query: 396 RLSLGTGTYMGANVNWMDSAGKEVSLWQTMMERPNFWVEGSLPLRPQL 539
R SLGTG G V WMD+ GKE+SLWQ M++RPNFWVEGSL LR L
Sbjct: 1462 RFSLGTGRSYGRQVEWMDATGKELSLWQNMLDRPNFWVEGSLVLRSSL 1509
>AY229970-1|AAP04481.1| 2645|Drosophila melanogaster bitesize isoform
2 protein.
Length = 2645
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +3
Query: 396 RLSLGTGTYMGANVNWMDSAGKEVSLWQTMMERPNFWVEGSLPLRPQL 539
R SLGTG G V WMD+ GKE+SLWQ M++RPNFWVEGSL LR L
Sbjct: 2590 RFSLGTGRSYGRQVEWMDATGKELSLWQNMLDRPNFWVEGSLVLRSSL 2637
>AY229969-1|AAP04480.1| 1102|Drosophila melanogaster bitesize isoform
1 protein.
Length = 1102
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +3
Query: 396 RLSLGTGTYMGANVNWMDSAGKEVSLWQTMMERPNFWVEGSLPLRPQL 539
R SLGTG G V WMD+ GKE+SLWQ M++RPNFWVEGSL LR L
Sbjct: 1047 RFSLGTGRSYGRQVEWMDATGKELSLWQNMLDRPNFWVEGSLVLRSSL 1094
>AE014297-1905|AAX52955.1| 1517|Drosophila melanogaster CG33555-PD,
isoform D protein.
Length = 1517
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +3
Query: 396 RLSLGTGTYMGANVNWMDSAGKEVSLWQTMMERPNFWVEGSLPLRPQL 539
R SLGTG G V WMD+ GKE+SLWQ M++RPNFWVEGSL LR L
Sbjct: 1462 RFSLGTGRSYGRQVEWMDATGKELSLWQNMLDRPNFWVEGSLVLRSSL 1509
>AE014297-1904|AAX52954.1| 2645|Drosophila melanogaster CG33555-PC,
isoform C protein.
Length = 2645
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +3
Query: 396 RLSLGTGTYMGANVNWMDSAGKEVSLWQTMMERPNFWVEGSLPLRPQL 539
R SLGTG G V WMD+ GKE+SLWQ M++RPNFWVEGSL LR L
Sbjct: 2590 RFSLGTGRSYGRQVEWMDATGKELSLWQNMLDRPNFWVEGSLVLRSSL 2637
>AE014297-1903|AAX52953.1| 1102|Drosophila melanogaster CG33555-PB,
isoform B protein.
Length = 1102
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +3
Query: 396 RLSLGTGTYMGANVNWMDSAGKEVSLWQTMMERPNFWVEGSLPLRPQL 539
R SLGTG G V WMD+ GKE+SLWQ M++RPNFWVEGSL LR L
Sbjct: 1047 RFSLGTGRSYGRQVEWMDATGKELSLWQNMLDRPNFWVEGSLVLRSSL 1094
>AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-PA,
isoform A protein.
Length = 1357
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +3
Query: 396 RLSLGTGTYMGANVNWMDSAGKEVSLWQTMMERPNFWVEGSLPLRPQL 539
R SLGTG G V WMD+ GKE+SLWQ M++RPNFWVEGSL LR L
Sbjct: 1302 RFSLGTGRSYGRQVEWMDATGKELSLWQNMLDRPNFWVEGSLVLRSSL 1349
>AY069683-1|AAL39828.1| 993|Drosophila melanogaster LD45449p
protein.
Length = 993
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 225 YFEPGAAAAQSTPPPPKHAPQVCPRQCSCGAEP 323
Y P A Q PPPPK APQ P G P
Sbjct: 138 YGPPPQPAPQYGPPPPKPAPQYGPPPTQYGPPP 170
>AE014298-2035|AAF48374.1| 993|Drosophila melanogaster CG9411-PA
protein.
Length = 993
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 225 YFEPGAAAAQSTPPPPKHAPQVCPRQCSCGAEP 323
Y P A Q PPPPK APQ P G P
Sbjct: 138 YGPPPQPAPQYGPPPPKPAPQYGPPPTQYGPPP 170
>AY069850-1|AAL39995.1| 755|Drosophila melanogaster SD09792p
protein.
Length = 755
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = +3
Query: 228 FEPGAAAAQS--TPPPPKHA 281
F PG+ A+QS TPPPP HA
Sbjct: 399 FSPGSQASQSPLTPPPPPHA 418
>AE014297-3575|AAN14003.1| 755|Drosophila melanogaster CG13624-PD,
isoform D protein.
Length = 755
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = +3
Query: 228 FEPGAAAAQS--TPPPPKHA 281
F PG+ A+QS TPPPP HA
Sbjct: 399 FSPGSQASQSPLTPPPPPHA 418
>AE014297-3574|AAN14002.1| 755|Drosophila melanogaster CG13624-PC,
isoform C protein.
Length = 755
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = +3
Query: 228 FEPGAAAAQS--TPPPPKHA 281
F PG+ A+QS TPPPP HA
Sbjct: 399 FSPGSQASQSPLTPPPPPHA 418
>AE014297-3573|AAN14001.1| 755|Drosophila melanogaster CG13624-PB,
isoform B protein.
Length = 755
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = +3
Query: 228 FEPGAAAAQS--TPPPPKHA 281
F PG+ A+QS TPPPP HA
Sbjct: 399 FSPGSQASQSPLTPPPPPHA 418
>AE014297-3572|AAF56314.2| 755|Drosophila melanogaster CG13624-PA,
isoform A protein.
Length = 755
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = +3
Query: 228 FEPGAAAAQS--TPPPPKHA 281
F PG+ A+QS TPPPP HA
Sbjct: 399 FSPGSQASQSPLTPPPPPHA 418
>AE014297-3571|ABI31204.1| 814|Drosophila melanogaster CG13624-PF,
isoform F protein.
Length = 814
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = +3
Query: 228 FEPGAAAAQS--TPPPPKHA 281
F PG+ A+QS TPPPP HA
Sbjct: 399 FSPGSQASQSPLTPPPPPHA 418
>AE014297-3570|ABI31203.1| 814|Drosophila melanogaster CG13624-PE,
isoform E protein.
Length = 814
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = +3
Query: 228 FEPGAAAAQS--TPPPPKHA 281
F PG+ A+QS TPPPP HA
Sbjct: 399 FSPGSQASQSPLTPPPPPHA 418
>AY122212-1|AAM52724.1| 658|Drosophila melanogaster LP07906p
protein.
Length = 658
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -3
Query: 112 SSGRIRPASGSLTSPASLLTPHSRFAGV 29
++GR+ P S S ++P S+++ H FAG+
Sbjct: 153 TTGRVTPGSSSNSTPPSIVSTHLPFAGL 180
>AY071192-1|AAL48814.1| 689|Drosophila melanogaster RE24065p
protein.
Length = 689
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 559 IGGSQLISWGLKGKDPSTQKFGRSIIV 479
+GG+ +S+G+ G D S+Q G ++V
Sbjct: 314 VGGNDYMSFGISGSDVSSQMIGSDVVV 340
>AE014298-2877|AAF48974.1| 348|Drosophila melanogaster CG14218-PA
protein.
Length = 348
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 216 DWDYFEPGAAAAQSTPPPPKHAPQVCPRQCSCGAEPR 326
D+DY AA A+ PPPP P P + PR
Sbjct: 157 DYDYDAQPAAPAEPPPPPPPPPPPTAPPRPRPRPRPR 193
>AE014297-1097|AAF54497.1| 689|Drosophila melanogaster CG6217-PA
protein.
Length = 689
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 559 IGGSQLISWGLKGKDPSTQKFGRSIIV 479
+GG+ +S+G+ G D S+Q G ++V
Sbjct: 314 VGGNDYMSFGISGSDVSSQMIGSDVVV 340
>AE014296-3604|AAF51767.2| 706|Drosophila melanogaster CG32447-PA,
isoform A protein.
Length = 706
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -3
Query: 112 SSGRIRPASGSLTSPASLLTPHSRFAGV 29
++GR+ P S S ++P S+++ H FAG+
Sbjct: 153 TTGRVTPGSSSNSTPPSIVSTHLPFAGL 180
>AE014296-3603|AAS65094.1| 658|Drosophila melanogaster CG32447-PB,
isoform B protein.
Length = 658
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -3
Query: 112 SSGRIRPASGSLTSPASLLTPHSRFAGV 29
++GR+ P S S ++P S+++ H FAG+
Sbjct: 153 TTGRVTPGSSSNSTPPSIVSTHLPFAGL 180
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,092,080
Number of Sequences: 53049
Number of extensions: 561161
Number of successful extensions: 2759
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2705
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -