Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0568
         (713 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14476-1|CAA32638.1| 1038|Drosophila melanogaster protein ( Dros...   163   3e-40
AF044974-1|AAC05260.1| 1002|Drosophila melanogaster Na+/K+ ATPas...   163   3e-40
AE014297-2899|AAS65186.1| 1002|Drosophila melanogaster CG5670-PG...   163   3e-40
AE014297-2898|AAS65185.1| 1002|Drosophila melanogaster CG5670-PH...   163   3e-40
AE014297-2897|AAS65184.1| 1002|Drosophila melanogaster CG5670-PF...   163   3e-40
AE014297-2896|AAS65183.1| 1002|Drosophila melanogaster CG5670-PE...   163   3e-40
AE014297-2895|AAF55827.3| 1002|Drosophila melanogaster CG5670-PC...   163   3e-40
AE014297-2894|AAF55828.1| 1002|Drosophila melanogaster CG5670-PB...   163   3e-40
AE014297-2893|AAF55825.3| 1041|Drosophila melanogaster CG5670-PA...   163   3e-40
AF202632-1|AAF17586.1| 1009|Drosophila melanogaster Na/K-ATPase ...   113   3e-25
AE014135-1|AAN06537.1|  290|Drosophila melanogaster CG17923-PA p...   113   3e-25
AE013599-3402|AAF46851.1| 1030|Drosophila melanogaster CG3701-PA...    34   0.17 

>X14476-1|CAA32638.1| 1038|Drosophila melanogaster protein (
            Drosophila Da-47 mRNAfor Na+,K+ ATPase alpha-subunit. ).
          Length = 1038

 Score =  163 bits (395), Expect = 3e-40
 Identities = 70/81 (86%), Positives = 73/81 (90%)
 Frame = +2

Query: 2    SIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYD 181
            SI  QGMRNWALNFGL+FET LAAFLSY PGM+KGLRMYPLK VWW PAIPF L+IFIYD
Sbjct: 958  SIFQQGMRNWALNFGLVFETVLAAFLSYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYD 1017

Query: 182  EIRRFYLRRNPGGWLEQETYY 244
            E RRFYLRRNPGGWLEQETYY
Sbjct: 1018 ETRRFYLRRNPGGWLEQETYY 1038


>AF044974-1|AAC05260.1| 1002|Drosophila melanogaster Na+/K+ ATPase
            alpha subunit protein.
          Length = 1002

 Score =  163 bits (395), Expect = 3e-40
 Identities = 70/81 (86%), Positives = 73/81 (90%)
 Frame = +2

Query: 2    SIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYD 181
            SI  QGMRNWALNFGL+FET LAAFLSY PGM+KGLRMYPLK VWW PAIPF L+IFIYD
Sbjct: 922  SIFQQGMRNWALNFGLVFETVLAAFLSYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYD 981

Query: 182  EIRRFYLRRNPGGWLEQETYY 244
            E RRFYLRRNPGGWLEQETYY
Sbjct: 982  ETRRFYLRRNPGGWLEQETYY 1002


>AE014297-2899|AAS65186.1| 1002|Drosophila melanogaster CG5670-PG,
            isoform G protein.
          Length = 1002

 Score =  163 bits (395), Expect = 3e-40
 Identities = 70/81 (86%), Positives = 73/81 (90%)
 Frame = +2

Query: 2    SIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYD 181
            SI  QGMRNWALNFGL+FET LAAFLSY PGM+KGLRMYPLK VWW PAIPF L+IFIYD
Sbjct: 922  SIFQQGMRNWALNFGLVFETVLAAFLSYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYD 981

Query: 182  EIRRFYLRRNPGGWLEQETYY 244
            E RRFYLRRNPGGWLEQETYY
Sbjct: 982  ETRRFYLRRNPGGWLEQETYY 1002


>AE014297-2898|AAS65185.1| 1002|Drosophila melanogaster CG5670-PH,
            isoform H protein.
          Length = 1002

 Score =  163 bits (395), Expect = 3e-40
 Identities = 70/81 (86%), Positives = 73/81 (90%)
 Frame = +2

Query: 2    SIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYD 181
            SI  QGMRNWALNFGL+FET LAAFLSY PGM+KGLRMYPLK VWW PAIPF L+IFIYD
Sbjct: 922  SIFQQGMRNWALNFGLVFETVLAAFLSYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYD 981

Query: 182  EIRRFYLRRNPGGWLEQETYY 244
            E RRFYLRRNPGGWLEQETYY
Sbjct: 982  ETRRFYLRRNPGGWLEQETYY 1002


>AE014297-2897|AAS65184.1| 1002|Drosophila melanogaster CG5670-PF,
            isoform F protein.
          Length = 1002

 Score =  163 bits (395), Expect = 3e-40
 Identities = 70/81 (86%), Positives = 73/81 (90%)
 Frame = +2

Query: 2    SIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYD 181
            SI  QGMRNWALNFGL+FET LAAFLSY PGM+KGLRMYPLK VWW PAIPF L+IFIYD
Sbjct: 922  SIFQQGMRNWALNFGLVFETVLAAFLSYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYD 981

Query: 182  EIRRFYLRRNPGGWLEQETYY 244
            E RRFYLRRNPGGWLEQETYY
Sbjct: 982  ETRRFYLRRNPGGWLEQETYY 1002


>AE014297-2896|AAS65183.1| 1002|Drosophila melanogaster CG5670-PE,
            isoform E protein.
          Length = 1002

 Score =  163 bits (395), Expect = 3e-40
 Identities = 70/81 (86%), Positives = 73/81 (90%)
 Frame = +2

Query: 2    SIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYD 181
            SI  QGMRNWALNFGL+FET LAAFLSY PGM+KGLRMYPLK VWW PAIPF L+IFIYD
Sbjct: 922  SIFQQGMRNWALNFGLVFETVLAAFLSYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYD 981

Query: 182  EIRRFYLRRNPGGWLEQETYY 244
            E RRFYLRRNPGGWLEQETYY
Sbjct: 982  ETRRFYLRRNPGGWLEQETYY 1002


>AE014297-2895|AAF55827.3| 1002|Drosophila melanogaster CG5670-PC,
            isoform C protein.
          Length = 1002

 Score =  163 bits (395), Expect = 3e-40
 Identities = 70/81 (86%), Positives = 73/81 (90%)
 Frame = +2

Query: 2    SIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYD 181
            SI  QGMRNWALNFGL+FET LAAFLSY PGM+KGLRMYPLK VWW PAIPF L+IFIYD
Sbjct: 922  SIFQQGMRNWALNFGLVFETVLAAFLSYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYD 981

Query: 182  EIRRFYLRRNPGGWLEQETYY 244
            E RRFYLRRNPGGWLEQETYY
Sbjct: 982  ETRRFYLRRNPGGWLEQETYY 1002


>AE014297-2894|AAF55828.1| 1002|Drosophila melanogaster CG5670-PB,
            isoform B protein.
          Length = 1002

 Score =  163 bits (395), Expect = 3e-40
 Identities = 70/81 (86%), Positives = 73/81 (90%)
 Frame = +2

Query: 2    SIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYD 181
            SI  QGMRNWALNFGL+FET LAAFLSY PGM+KGLRMYPLK VWW PAIPF L+IFIYD
Sbjct: 922  SIFQQGMRNWALNFGLVFETVLAAFLSYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYD 981

Query: 182  EIRRFYLRRNPGGWLEQETYY 244
            E RRFYLRRNPGGWLEQETYY
Sbjct: 982  ETRRFYLRRNPGGWLEQETYY 1002


>AE014297-2893|AAF55825.3| 1041|Drosophila melanogaster CG5670-PA,
            isoform A protein.
          Length = 1041

 Score =  163 bits (395), Expect = 3e-40
 Identities = 70/81 (86%), Positives = 73/81 (90%)
 Frame = +2

Query: 2    SIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYD 181
            SI  QGMRNWALNFGL+FET LAAFLSY PGM+KGLRMYPLK VWW PAIPF L+IFIYD
Sbjct: 961  SIFQQGMRNWALNFGLVFETVLAAFLSYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYD 1020

Query: 182  EIRRFYLRRNPGGWLEQETYY 244
            E RRFYLRRNPGGWLEQETYY
Sbjct: 1021 ETRRFYLRRNPGGWLEQETYY 1041


>AF202632-1|AAF17586.1| 1009|Drosophila melanogaster Na/K-ATPase alpha
            subunit isoform2 protein.
          Length = 1009

 Score =  113 bits (271), Expect = 3e-25
 Identities = 48/81 (59%), Positives = 58/81 (71%)
 Frame = +2

Query: 2    SIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYD 181
            SI+ QGM N  LNF L+ E  +A  L Y P  +K LRMY +KF+WW+ A PF L IF +D
Sbjct: 929  SILQQGMGNHVLNFALVLEFIIACLLCYVPVFEKTLRMYSIKFIWWIYAFPFGLLIFFFD 988

Query: 182  EIRRFYLRRNPGGWLEQETYY 244
            E RRF +RRNPGGW+EQETYY
Sbjct: 989  ESRRFLIRRNPGGWVEQETYY 1009


>AE014135-1|AAN06537.1|  290|Drosophila melanogaster CG17923-PA
           protein.
          Length = 290

 Score =  113 bits (271), Expect = 3e-25
 Identities = 48/81 (59%), Positives = 58/81 (71%)
 Frame = +2

Query: 2   SIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRMYPLKFVWWLPAIPFMLSIFIYD 181
           SI+ QGM N  LNF L+ E  +A  L Y P  +K LRMY +KF+WW+ A PF L IF +D
Sbjct: 210 SILQQGMGNHVLNFALVLEFIIACLLCYVPVFEKTLRMYSIKFIWWIYAFPFGLLIFFFD 269

Query: 182 EIRRFYLRRNPGGWLEQETYY 244
           E RRF +RRNPGGW+EQETYY
Sbjct: 270 ESRRFLIRRNPGGWVEQETYY 290


>AE013599-3402|AAF46851.1| 1030|Drosophila melanogaster CG3701-PA
            protein.
          Length = 1030

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
 Frame = +2

Query: 2    SIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRMY---PLKFVWWLPA-IPFMLSI 169
            +++  G RNW L+  ++    L   L         LR+     L F  +L    PFM+ +
Sbjct: 947  NLLAHGFRNWLLSLAVLLLICLCVQLCIMDST-VCLRLEGTNELHFGHFLLTNCPFMILL 1005

Query: 170  FIYDEIRRFYLRRNPGGWLEQETYY 244
               +  RR+++R  P  WLE  T Y
Sbjct: 1006 VFIETTRRYFIRLFPDSWLELATMY 1030


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,164,148
Number of Sequences: 53049
Number of extensions: 659461
Number of successful extensions: 1999
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1999
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)