Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0567
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    25   0.76 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   4.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   5.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.4  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 258 RYSIAGKCLPHLPQWAIDNFGIDPDSP 338
           R S+   CL    QW  D   ID + P
Sbjct: 122 RASLISSCLSFFSQWGYDGIDIDWEYP 148


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 282 LPHLPQWAIDN 314
           +P LPQW +DN
Sbjct: 505 MPLLPQWILDN 515


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 610 PPKGMITKLCRDAHWTIF 557
           PP G I +L RDA++++F
Sbjct: 66  PPLGEILELERDANFSLF 83


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 570 CASRHNFVIIPFGGG 614
           C  RH F  +PF  G
Sbjct: 433 CQKRHPFAYLPFSAG 447


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -2

Query: 193 YHFSRSCLRRGIALLTFIIIVFADSFLFLSLGYFIFNTLHCSF 65
           Y F+R  L + +  +  I I     FL+  + Y I +T+   +
Sbjct: 115 YAFTRIILLKSVLEIVIIDIEIYSQFLYGFMIYLILDTIKSKY 157


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 570 CASRHNFVIIPFGGG 614
           C  RH F  +PF  G
Sbjct: 433 CQKRHPFAYLPFSAG 447


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 342 WAGNLDLCQSCLWPTAVGGV 283
           W+   D+C+  L P   GGV
Sbjct: 38  WSDIADVCERFLAPKGFGGV 57


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +3

Query: 468 TLKDIANV-RNNNFRRIPDAVIWPDCHEQVEKIVQCASRHNFVIIPFG 608
           TLK +  + R NN  +IP  +IW     +   I +   + N V+  +G
Sbjct: 433 TLKALKRLERANNGVKIPLVIIWSSNLSKRPYIYKYLDKKNVVVQSWG 480


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +1

Query: 151 KVLFLDVDRIC 183
           KVLF DVDR C
Sbjct: 209 KVLFKDVDRNC 219


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +1

Query: 151 KVLFLDVDRIC 183
           KVLF DVDR C
Sbjct: 209 KVLFKDVDRNC 219


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +1

Query: 151 KVLFLDVDRIC 183
           KVLF DVDR C
Sbjct: 209 KVLFKDVDRNC 219


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 231 SESAAFTGNRYSIAGKCLPHLPQWAIDNFGIDPDSP 338
           S+ AA    R +     L  + +W  D F +D + P
Sbjct: 113 SQVAADAAKRATFIKSALNLVQKWGFDGFDLDWEYP 148


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 17  PNEISPENLRNIDNGSERTVESVKNKISE 103
           PN ISPE   N +N       SV+ + S+
Sbjct: 447 PNYISPEVFPNTNNAIMTPPASVQTESSD 475


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 17  PNEISPENLRNIDNGSERTVESVKNKISE 103
           PN ISPE   N +N       SV+ + S+
Sbjct: 395 PNYISPEVFPNTNNAIMTPPASVQTESSD 423


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +3

Query: 75   WRVL--KIKYPSDKNKNESA 128
            W+ L  K  YP D+NK E A
Sbjct: 1236 WKDLLDKYLYPIDENKEEKA 1255


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +3

Query: 75   WRVL--KIKYPSDKNKNESA 128
            W+ L  K  YP D+NK E A
Sbjct: 1236 WKDLLDKYLYPIDENKEEKA 1255


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +3

Query: 75   WRVL--KIKYPSDKNKNESA 128
            W+ L  K  YP D+NK E A
Sbjct: 1236 WKDLLDKYLYPIDENKEEKA 1255


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +3

Query: 75   WRVL--KIKYPSDKNKNESA 128
            W+ L  K  YP D+NK E A
Sbjct: 1236 WKDLLDKYLYPIDENKEEKA 1255


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 387 PAGDFLQNYLALPE 346
           PAG    NYL LP+
Sbjct: 166 PAGFLCNNYLPLPQ 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,952
Number of Sequences: 336
Number of extensions: 3688
Number of successful extensions: 24
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)