Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0565
(762 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 384 e-107
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 379 e-105
SB_56| Best HMM Match : Actin (HMM E-Value=0) 378 e-105
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 377 e-105
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 353 1e-97
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 197 9e-51
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-46
SB_54| Best HMM Match : Actin (HMM E-Value=0) 153 1e-37
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 140 1e-33
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 116 2e-26
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 102 3e-22
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 58 6e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 2e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 43 3e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.083
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.083
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.11
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 33 0.33
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 0.77
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.77
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.77
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 31 1.4
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 1.4
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.8
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.8
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.4
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 3.1
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 29 4.1
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 4.1
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 29 4.1
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 29 4.1
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 5.5
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 5.5
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 5.5
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_53945| Best HMM Match : POPLD (HMM E-Value=1) 28 7.2
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 7.2
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 28 7.2
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 28 7.2
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 28 9.5
SB_25841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 9.5
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 28 9.5
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 9.5
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 28 9.5
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 384 bits (945), Expect = e-107
Identities = 177/182 (97%), Positives = 182/182 (100%)
Frame = +2
Query: 149 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 328
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 329 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 508
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 509 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 688
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 689 LA 694
LA
Sbjct: 181 LA 182
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 696 GRDLTDYLMKILTERGYSFTTT 761
GRDLTDYLMKILTERGYSFTTT
Sbjct: 183 GRDLTDYLMKILTERGYSFTTT 204
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 379 bits (932), Expect = e-105
Identities = 175/182 (96%), Positives = 181/182 (99%)
Frame = +2
Query: 149 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 328
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 329 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 508
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 509 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 688
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 689 LA 694
LA
Sbjct: 181 LA 182
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 696 GRDLTDYLMKILTERGYSFTTT 761
GRDLTDYLMKILTERGYSFTTT
Sbjct: 183 GRDLTDYLMKILTERGYSFTTT 204
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 378 bits (930), Expect = e-105
Identities = 175/180 (97%), Positives = 180/180 (100%)
Frame = +2
Query: 155 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 334
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 335 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 514
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 515 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 694
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 696 GRDLTDYLMKILTERGYSFTTT 761
GRDLTDYLMKILTERGYSFTTT
Sbjct: 182 GRDLTDYLMKILTERGYSFTTT 203
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 377 bits (927), Expect = e-105
Identities = 174/180 (96%), Positives = 180/180 (100%)
Frame = +2
Query: 155 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 334
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 335 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 514
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 515 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 694
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 696 GRDLTDYLMKILTERGYSFTTT 761
GRDLTDYLMKILTERGYSFTTT
Sbjct: 182 GRDLTDYLMKILTERGYSFTTT 203
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 353 bits (867), Expect = 1e-97
Identities = 163/173 (94%), Positives = 170/173 (98%), Gaps = 2/173 (1%)
Frame = +2
Query: 149 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 328
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 329 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 508
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 509 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 661
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 197 bits (480), Expect = 9e-51
Identities = 91/179 (50%), Positives = 124/179 (69%), Gaps = 3/179 (1%)
Frame = +2
Query: 167 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 340
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 341 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 517
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 518 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 694
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+A
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIA 185
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 696 GRDLTDYLMKILTERGYSFTTT 761
GRD+T YL+K++ RGY+F T
Sbjct: 186 GRDITKYLIKLMLLRGYAFNHT 207
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 183 bits (445), Expect = 2e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +2
Query: 155 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 334
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 335 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 421
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 125 bits (301), Expect = 5e-29
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = +2
Query: 494 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 673
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 674 ILRLDLA 694
I+RLDLA
Sbjct: 138 IIRLDLA 144
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 696 GRDLTDYLMKILTERGYSFTTT 761
GRDLTDYLMKILTERGYSFTTT
Sbjct: 145 GRDLTDYLMKILTERGYSFTTT 166
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 153 bits (372), Expect = 1e-37
Identities = 69/98 (70%), Positives = 82/98 (83%)
Frame = +2
Query: 401 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 580
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 581 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 694
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLA
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLA 2226
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 173 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 274
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3
Query: 696 GRDLTDYLMKILTERGYSFTTT 761
GRDLT YL +++TERGYSF +T
Sbjct: 2227 GRDLTHYLQRLVTERGYSFQST 2248
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 140 bits (339), Expect = 1e-33
Identities = 58/82 (70%), Positives = 76/82 (92%)
Frame = +2
Query: 449 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 628
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 629 SHTVPIYEGYALPHAILRLDLA 694
SH+VPIYEG+A+PH+I+R D+A
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIA 207
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 116 bits (280), Expect = 2e-26
Identities = 54/60 (90%), Positives = 57/60 (95%)
Frame = +2
Query: 515 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 694
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +3
Query: 696 GRDLTDYLMKILTERGYSFTTT 761
GRDLTDYLMK++TERGYSFTTT
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTT 82
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 102 bits (245), Expect = 3e-22
Identities = 44/112 (39%), Positives = 74/112 (66%)
Frame = +2
Query: 359 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 538
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 539 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 694
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LA
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLA 114
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 158 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 274
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 58.4 bits (135), Expect = 6e-09
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Frame = +2
Query: 161 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 340
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 341 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 514
L Y P + G + NWD ++IW +TF E + M +
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDE 323
Query: 515 IMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 676
I+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 324 ILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAV 383
Query: 677 LR 682
R
Sbjct: 384 RR 385
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +2
Query: 143 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 313
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 314 GDEAQSKRGILTL 352
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +2
Query: 560 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 691
Q LSLYASG T G+ L SG + IYEG+ L H + L++
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEI 810
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +2
Query: 287 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 466
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 596 TGIVLDSGDGVSHTVPI 646
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 527 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 694
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +A
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIA 94
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 404 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 583
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 584 SGRTTGIV 607
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.7 bits (76), Expect = 0.083
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -3
Query: 271 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 155
MA + D G++ + SI+S E GLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 34.7 bits (76), Expect = 0.083
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 540 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 677
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 519 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTRDTHSPTPSC 680
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 540 PPCTSPSKPCSRCTRPVVPPVSC 608
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 528 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 641
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 543 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 641
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 528 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTRDTHSPTPS 677
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 519 CSKHSTRPPCT--SPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTRDTHSPTPS 677
C+ + P T +PS P + CT P + TP+T S TPC PST T S TPS
Sbjct: 40 CTPSTPSTPSTPITPSTPSTPCTHST--PSAPSTPSTPS-TPCTPSTPSTPS-TPS 91
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +3
Query: 525 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHSP--TPS 677
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 29.1 bits (62), Expect = 4.1
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
Frame = +3
Query: 549 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHS-------PTPSCVWTWPG 698
++PS PC+ T P P P + TP+T S TPC PST T S P+ C + PG
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPRTPSTPCTHSTPG 432
Query: 699 RDLT 710
T
Sbjct: 433 TPST 436
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 522 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTRDTHSPTPS 677
S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 540 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSPTPS 677
P TSP + P +R P+ PP C + V PTP S++ + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 142 LVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCSTQC 26
L++L C C+K + KR + + Q+P C C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQCMNTC 658
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 549 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWP 695
T+P+ P + T P P + TP T + TP +P P+ P
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPAAAAAAP 178
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +3
Query: 543 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTRDTHSP 668
P T PC + CT+ +P +TP T TPC PST +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +3
Query: 519 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 641
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 543 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 641
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 154 AHLELVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCSTQ 29
A L L+KL CRC K +R + + + IP C C+++
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLCTSE 1337
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 540 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 677
P SP+ P P P + TP T +PT T+ T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 534 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 677
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 540 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTRDTHSPTPS 677
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +3
Query: 534 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC---PSTRDTHSPTPS 677
T+P T+P+ T P S P +PTP P+T +PTP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +3
Query: 531 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 671
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +3
Query: 534 TRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TRDTHSPT 671
T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 92 TKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +3
Query: 531 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTRDTHSPTPS 677
ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 540 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 635
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 350 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 502
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 246 GNTARGASSPAKPALHIPEPLSTT 175
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 31.5 bits (68), Expect = 0.77
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +3
Query: 528 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTRDTHSPTPSCV-WTWP 695
H+T+PP T P +KP + R PP + P T P T P T H+ P + T P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKPHNIDPTLP 194
Query: 696 GRDLTDYLMKIL 731
L + L+ L
Sbjct: 195 SPTLLNALLHFL 206
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 491 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 607
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 246 GNTARGASSPAKPALHIPEPLSTT 175
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 537 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHS 665
+PP T+PSK T P+ P++ TP T T +T+ T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 1.4
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -1
Query: 636 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 484
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 483 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 319
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 246 GNTARGASSPAKPALHIPEPLSTT 175
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 475 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 567
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 528 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 677
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Frame = +3
Query: 531 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRD--THSPTPSCVWTWP 695
+T P T+P+KP + T P + PAT +PT +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Query: 696 G--RDLTDYLMKILTERGYS 749
T L+ + + R YS
Sbjct: 183 ATTTPTTRPLLLLCSRRTYS 202
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +3
Query: 528 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRD--THSPTPSCVWTW 692
++T P T+P+KP + T P + PAT +PT +T T +PT T
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTP 125
Query: 693 PG 698
PG
Sbjct: 126 PG 127
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 531 STRPPC-TSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 677
+T PP T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 52 TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 555 PSKPCSRCTRPVVPP 599
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 543 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 641
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 543 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 647
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 540 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTRDTHSPTP 674
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 549 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTR 653
+SP KP T+PVVP P+ + P P PS++
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = -1
Query: 672 AWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLL 493
+W P T W +PSP+ T P ++T+W + +S++ +I L
Sbjct: 101 SWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSLYHIIGRLS 160
Query: 492 ALGLR 478
+ R
Sbjct: 161 GVHYR 165
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 663 SAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 559
S +P T W +PSP+ T P ++T+W
Sbjct: 68 STFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Frame = +3
Query: 549 TSPSKPCSRCTRPVVPPVSCWTPATVS---------PTPCPSTRDTHSPTPSC-VWTWPG 698
T S+PC +CT V P + T A S PTP S R+ H +P WT G
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWTEKG 97
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = -3
Query: 247 GKHCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRCD 113
G+HC + I C G GA GN+ E C D
Sbjct: 724 GRHCEKDIDECSLGYCKNGATCTNTPGNYSCQCTEFTNGTNCELD 768
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 29.1 bits (62), Expect = 4.1
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 12/76 (15%)
Frame = +3
Query: 525 KHSTRPPCTSP---SKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTRD-THSP-TPSC 680
KH+T PP T+P ++P P P T P T P+T T+ P TP C
Sbjct: 358 KHTTEPPRTTPEPTTEPPQTTPEPTTEPSRTKPELTTEPSRTTVEPTTEHVTNVPRTPGC 417
Query: 681 V----WTWPGRDLTDY 716
+ W PG T Y
Sbjct: 418 LYEGKWYPPGNHQTGY 433
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 579 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPGR 701
T VVPP+ P V P+P + SPTPSC+ P +
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCIEQQPSQ 242
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 454 PRPAY*GSPQPQGQ---QREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHR 600
PR A +P+PQ + Q +PDHVR + V SR+ V R+Y R
Sbjct: 704 PRDATTHTPEPQQEPEVQSHMEPDHVRYMLERMSVNYPTSRSSFVDPRTYPR 755
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 576 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 677
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 519 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTRDTHSPTPSCVWTWP 695
C+ T P +P+ + T P + +TP T +PTP + +++PTPS T
Sbjct: 40 CTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPSYTSTTS 97
Query: 696 GRDLTDY 716
T Y
Sbjct: 98 YTPTTSY 104
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 514 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIR 660
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 479 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 607
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +3
Query: 549 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 686
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1741
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 755 SERVAALGEDLHEVVCEVTTGPSPDAGWRGGVRI 654
++ + L + E+VCE T P P+ W G R+
Sbjct: 684 NKTIIVLENNTVELVCETTGSPPPNITWTKGYRV 717
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +3
Query: 525 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTRDTHSPTP 674
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 552 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 674
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -1
Query: 630 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 457
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 456 G 454
G
Sbjct: 147 G 147
>SB_53945| Best HMM Match : POPLD (HMM E-Value=1)
Length = 465
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +3
Query: 537 RPPCTSPSK--PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT-WPGRDL 707
RPP T+P+ P S T PP+ TP + TP P+ + P T W +
Sbjct: 30 RPPETTPAPTTPTSPATPASGPPIR--TPIPLKETPTPALESAPAAMPDATDTAWNRLSV 87
Query: 708 TDYL 719
T +L
Sbjct: 88 TYFL 91
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 508 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRH 675
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 537 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 674
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 246 GNTARGASSPAKPALHIPEPLSTT 175
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 246 GNTARGASSPAKPALHIPEPLSTT 175
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 525 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 677
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 531 STRPPCTSPSKPCSRCTRPVVPP-VSCWTPATV-SPTPCPSTRDTHSPTPSCVWTWPGR 701
+TRP TS +KP + T+P PP + T T P P++ SP P+ PG+
Sbjct: 31 ATRPTSTS-TKPTTASTKPTSPPSQAARTRNTAEKPEEKPASSGAASPIPASKPGQPGK 88
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 484 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRT 663
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 664 PPRHP 678
P HP
Sbjct: 248 APDHP 252
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +3
Query: 543 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT-WPGRDLTDYL 719
P +P+ P S T PP+ TP + TP P + P T W +T +L
Sbjct: 127 PAPAPTTPTSPATPASGPPIR--TPIPLKETPTPELESAPAAMPDATDTAWDRLSVTYFL 184
>SB_25841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -2
Query: 338 LFCSVPHLLHKSPSVPYR---PSRPDGGAFPRSRETLREEHHLLRSRPCTYRS 189
LF + P L SVP P+R + G P S LR + LLR + TY +
Sbjct: 213 LFSAQPESLGPVVSVPEANAVPARVETGGTPASSPNLRVDQILLRLKMLTYNT 265
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 540 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 638
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 478 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGI 657
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 658 RT 663
+T
Sbjct: 707 QT 708
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 529 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTP 666
I H++ RH S+ L R R HR + RR H+ + P
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRP 1633
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 561 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 680
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -2
Query: 323 PHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 153
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = -3
Query: 694 GQVQTQDGVGECVS--LVDGHGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHGGRVEC 527
G+V GVG+ + + D GVGD G D GG DG V V C
Sbjct: 170 GRVSDYGGVGDDANGRVSDDGGVGDNAEGRVSDDGGVGDNADGRVSDDGGVGDDDVVC 227
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,162,644
Number of Sequences: 59808
Number of extensions: 734758
Number of successful extensions: 2980
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 2391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2921
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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