Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0563
         (354 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    26   0.48 
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    26   0.48 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   0.63 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    22   7.8  

>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 114 STLFICLENS-GVKDMHQIK*NLKYQDV 194
           S  F  LEN  GVK  H++K N KY +V
Sbjct: 139 SLQFRLLENKLGVKSEHRVKYNQKYTEV 166


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 114 STLFICLENS-GVKDMHQIK*NLKYQDV 194
           S  F  LEN  GVK  H++K N KY +V
Sbjct: 139 SLQFRLLENKLGVKSEHRVKYNQKYTEV 166


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 261  ADNSWTGMASTRFPDHDERCCDAGSL 338
            A  S +G A+TR PD   R C  G L
Sbjct: 992  AAGSSSGTATTRIPDSITRSCSVGYL 1017


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 17  GGGPNNSVHYRIYNG 61
           G  PNN V YRI  G
Sbjct: 770 GSFPNNHVTYRIQQG 784


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,334
Number of Sequences: 2352
Number of extensions: 7001
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)