Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0563
(354 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82208-3|CAI42770.1| 740|Homo sapiens BCL6 co-repressor-like 1 ... 30 2.4
Z82208-2|CAI42769.1| 1385|Homo sapiens BCL6 co-repressor-like 1 ... 30 2.4
Z82208-1|CAI42768.1| 1711|Homo sapiens BCL6 co-repressor-like 1 ... 30 2.4
AL136450-4|CAI42885.1| 1385|Homo sapiens BCL6 co-repressor-like ... 30 2.4
AL136450-3|CAI42884.1| 1711|Homo sapiens BCL6 co-repressor-like ... 30 2.4
AL096777-1|CAB46626.1| 723|Homo sapiens hypothetical protein pr... 30 2.4
AK074089-1|BAB84915.1| 1696|Homo sapiens FLJ00160 protein protein. 30 2.4
AK027867-1|BAB55418.1| 418|Homo sapiens protein ( Homo sapiens ... 29 4.1
AK027501-1|BAB55158.1| 699|Homo sapiens protein ( Homo sapiens ... 29 4.1
AF279656-1|AAG29378.1| 1030|Homo sapiens semaphorin SEMA6A1 prot... 29 4.1
AB037789-1|BAA92606.1| 1049|Homo sapiens KIAA1368 protein protein. 29 4.1
BC112042-1|AAI12043.1| 597|Homo sapiens WD repeats and SOF1 dom... 28 9.5
BC101810-1|AAI01811.1| 597|Homo sapiens WD repeats and SOF1 dom... 28 9.5
AK074725-1|BAC11163.1| 597|Homo sapiens protein ( Homo sapiens ... 28 9.5
>Z82208-3|CAI42770.1| 740|Homo sapiens BCL6 co-repressor-like 1
protein.
Length = 740
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 149 KRYAPDQIESQVPGCQRREGFDLKRPSGVRGLSSR 253
KRY P +I +PGCQ +E L +P+G + R
Sbjct: 218 KRYTPARIAPGLPGCQTKE-LSLWKPTGPANIYPR 251
>Z82208-2|CAI42769.1| 1385|Homo sapiens BCL6 co-repressor-like 1
protein.
Length = 1385
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 149 KRYAPDQIESQVPGCQRREGFDLKRPSGVRGLSSR 253
KRY P +I +PGCQ +E L +P+G + R
Sbjct: 383 KRYTPARIAPGLPGCQTKE-LSLWKPTGPANIYPR 416
>Z82208-1|CAI42768.1| 1711|Homo sapiens BCL6 co-repressor-like 1
protein.
Length = 1711
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 149 KRYAPDQIESQVPGCQRREGFDLKRPSGVRGLSSR 253
KRY P +I +PGCQ +E L +P+G + R
Sbjct: 783 KRYTPARIAPGLPGCQTKE-LSLWKPTGPANIYPR 816
>AL136450-4|CAI42885.1| 1385|Homo sapiens BCL6 co-repressor-like 1
protein.
Length = 1385
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 149 KRYAPDQIESQVPGCQRREGFDLKRPSGVRGLSSR 253
KRY P +I +PGCQ +E L +P+G + R
Sbjct: 383 KRYTPARIAPGLPGCQTKE-LSLWKPTGPANIYPR 416
>AL136450-3|CAI42884.1| 1711|Homo sapiens BCL6 co-repressor-like 1
protein.
Length = 1711
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 149 KRYAPDQIESQVPGCQRREGFDLKRPSGVRGLSSR 253
KRY P +I +PGCQ +E L +P+G + R
Sbjct: 783 KRYTPARIAPGLPGCQTKE-LSLWKPTGPANIYPR 816
>AL096777-1|CAB46626.1| 723|Homo sapiens hypothetical protein
protein.
Length = 723
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 149 KRYAPDQIESQVPGCQRREGFDLKRPSGVRGLSSR 253
KRY P +I +PGCQ +E L +P+G + R
Sbjct: 201 KRYTPARIAPGLPGCQTKE-LSLWKPTGPANIYPR 234
>AK074089-1|BAB84915.1| 1696|Homo sapiens FLJ00160 protein protein.
Length = 1696
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 149 KRYAPDQIESQVPGCQRREGFDLKRPSGVRGLSSR 253
KRY P +I +PGCQ +E L +P+G + R
Sbjct: 768 KRYTPARIAPGLPGCQTKE-LSLWKPTGPANIYPR 801
>AK027867-1|BAB55418.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ14961 fis, clone PLACE4000230, highly similar to
Mus musculus semaphorin VIa mRNA. ).
Length = 418
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 237 GDYPHVHSADNSWTGMASTRFPDHDERCCDAGSLSIDR 350
G + S D++WT + R P CC AGS S++R
Sbjct: 280 GRFKEQKSPDSTWTPVPDERVPKPRPGCC-AGSSSLER 316
>AK027501-1|BAB55158.1| 699|Homo sapiens protein ( Homo sapiens
cDNA FLJ14595 fis, clone NT2RM4002194, highly similar to
Mus musculus semaphorin VIa mRNA. ).
Length = 699
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 237 GDYPHVHSADNSWTGMASTRFPDHDERCCDAGSLSIDR 350
G + S D++WT + R P CC AGS S++R
Sbjct: 10 GRFKEQKSPDSTWTPVPDERVPKPRPGCC-AGSSSLER 46
>AF279656-1|AAG29378.1| 1030|Homo sapiens semaphorin SEMA6A1
protein.
Length = 1030
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 237 GDYPHVHSADNSWTGMASTRFPDHDERCCDAGSLSIDR 350
G + S D++WT + R P CC AGS S++R
Sbjct: 341 GRFKEQKSPDSTWTPVPDERVPKPRPGCC-AGSSSLER 377
>AB037789-1|BAA92606.1| 1049|Homo sapiens KIAA1368 protein protein.
Length = 1049
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 237 GDYPHVHSADNSWTGMASTRFPDHDERCCDAGSLSIDR 350
G + S D++WT + R P CC AGS S++R
Sbjct: 343 GRFKEQKSPDSTWTPVPDERVPKPRPGCC-AGSSSLER 379
>BC112042-1|AAI12043.1| 597|Homo sapiens WD repeats and SOF1 domain
containing protein.
Length = 597
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -1
Query: 321 NSAHHGRG---TA*KPSQSSCC-QRYGREDNPLTPLG 223
N+ HGRG TA +P ++ C Q YG +P+ P G
Sbjct: 74 NAPAHGRGSDCTAKEPPLANVCRQNYGAAQDPVEPAG 110
>BC101810-1|AAI01811.1| 597|Homo sapiens WD repeats and SOF1 domain
containing protein.
Length = 597
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -1
Query: 321 NSAHHGRG---TA*KPSQSSCC-QRYGREDNPLTPLG 223
N+ HGRG TA +P ++ C Q YG +P+ P G
Sbjct: 74 NAPAHGRGSDCTAKEPPLANVCRQNYGAAQDPVEPAG 110
>AK074725-1|BAC11163.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90244 fis, clone NT2RM2001738, weakly similar to
SOF1 PROTEIN. ).
Length = 597
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -1
Query: 321 NSAHHGRG---TA*KPSQSSCC-QRYGREDNPLTPLG 223
N+ HGRG TA +P ++ C Q YG +P+ P G
Sbjct: 74 NAPAHGRGSDCTAKEPPLANVCRQNYGAAQDPVEPAG 110
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,414,097
Number of Sequences: 237096
Number of extensions: 1062123
Number of successful extensions: 2098
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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