Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0563
(354 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118488-1|AAM49857.1| 271|Drosophila melanogaster LD01519p pro... 28 3.0
AE013599-2918|AAF57540.1| 271|Drosophila melanogaster CG11007-P... 28 3.0
BT030115-1|ABN49254.1| 528|Drosophila melanogaster IP08109p pro... 28 3.9
AE014134-2536|AAF53420.2| 225|Drosophila melanogaster CG15277-P... 28 3.9
U20542-1|AAA63150.1| 1133|Drosophila melanogaster lethal(1)1Bi p... 27 6.9
BT021267-1|AAX33415.1| 1133|Drosophila melanogaster RE47565p pro... 27 6.9
AY119580-1|AAM50234.1| 1005|Drosophila melanogaster LD09823p pro... 27 6.9
AL031581-6|CAA20885.1| 1133|Drosophila melanogaster EG:115C2.2,F... 27 6.9
AE014298-78|AAF45532.1| 1133|Drosophila melanogaster CG6189-PA p... 27 6.9
AY070571-1|AAL48042.1| 550|Drosophila melanogaster RE11317p pro... 27 9.1
AY051462-1|AAK92886.1| 715|Drosophila melanogaster GH13229p pro... 27 9.1
AE014296-778|AAX52730.2| 660|Drosophila melanogaster CG33545-PA... 27 9.1
AE014134-1610|AAO41178.1| 550|Drosophila melanogaster CG32982-P... 27 9.1
AE014134-1609|ABI31303.1| 571|Drosophila melanogaster CG32982-P... 27 9.1
AE014134-1607|AAF52751.2| 715|Drosophila melanogaster CG32982-P... 27 9.1
>AY118488-1|AAM49857.1| 271|Drosophila melanogaster LD01519p
protein.
Length = 271
Score = 28.3 bits (60), Expect = 3.0
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Frame = -3
Query: 193 TSWYLRFYLIW---CISFTPEFS 134
TSW + FY +W C++F P F+
Sbjct: 148 TSWLICFYTVWNPSCVNFAPVFA 170
>AE013599-2918|AAF57540.1| 271|Drosophila melanogaster CG11007-PA
protein.
Length = 271
Score = 28.3 bits (60), Expect = 3.0
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Frame = -3
Query: 193 TSWYLRFYLIW---CISFTPEFS 134
TSW + FY +W C++F P F+
Sbjct: 148 TSWLICFYTVWNPSCVNFAPVFA 170
>BT030115-1|ABN49254.1| 528|Drosophila melanogaster IP08109p
protein.
Length = 528
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 274 GLGWLLRGSPTMMSAVATLGAYL 342
G+G + GSPT +S+ ATL A+L
Sbjct: 380 GVGGTVIGSPTSLSSTATLAAHL 402
>AE014134-2536|AAF53420.2| 225|Drosophila melanogaster CG15277-PA
protein.
Length = 225
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 274 GLGWLLRGSPTMMSAVATLGAYL 342
G+G + GSPT +S+ ATL A+L
Sbjct: 77 GVGGTVIGSPTSLSSTATLAAHL 99
>U20542-1|AAA63150.1| 1133|Drosophila melanogaster lethal(1)1Bi
protein protein.
Length = 1133
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 3 SRHGQAAGQTTQFTIVFITDTTCR**LFKNSYRNVKTSTLFICLENSGVKDMHQIK*NLK 182
S+ GQ+ + I+F++ C K L IC +N+ K Q+ LK
Sbjct: 610 SKESDVVGQSFEALILFVSLALCT----KIPPSITVLEDLIICRKNALQKSKEQVNEELK 665
Query: 183 YQDV 194
+QDV
Sbjct: 666 WQDV 669
>BT021267-1|AAX33415.1| 1133|Drosophila melanogaster RE47565p
protein.
Length = 1133
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 3 SRHGQAAGQTTQFTIVFITDTTCR**LFKNSYRNVKTSTLFICLENSGVKDMHQIK*NLK 182
S+ GQ+ + I+F++ C K L IC +N+ K Q+ LK
Sbjct: 610 SKESDVVGQSFEALILFVSLALCT----KIPPSITVLEDLIICRKNALQKSKEQVNEELK 665
Query: 183 YQDV 194
+QDV
Sbjct: 666 WQDV 669
>AY119580-1|AAM50234.1| 1005|Drosophila melanogaster LD09823p
protein.
Length = 1005
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 3 SRHGQAAGQTTQFTIVFITDTTCR**LFKNSYRNVKTSTLFICLENSGVKDMHQIK*NLK 182
S+ GQ+ + I+F++ C K L IC +N+ K Q+ LK
Sbjct: 482 SKESDVVGQSFEALILFVSLALCT----KIPPSITVLEDLIICRKNALQKSKEQVNEELK 537
Query: 183 YQDV 194
+QDV
Sbjct: 538 WQDV 541
>AL031581-6|CAA20885.1| 1133|Drosophila melanogaster
EG:115C2.2,FBgn0001341;l(1)1Bi protein.
Length = 1133
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 3 SRHGQAAGQTTQFTIVFITDTTCR**LFKNSYRNVKTSTLFICLENSGVKDMHQIK*NLK 182
S+ GQ+ + I+F++ C K L IC +N+ K Q+ LK
Sbjct: 610 SKESDVVGQSFEALILFVSLALCT----KIPPSITVLEDLIICRKNALQKSKEQVNEELK 665
Query: 183 YQDV 194
+QDV
Sbjct: 666 WQDV 669
>AE014298-78|AAF45532.1| 1133|Drosophila melanogaster CG6189-PA
protein.
Length = 1133
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 3 SRHGQAAGQTTQFTIVFITDTTCR**LFKNSYRNVKTSTLFICLENSGVKDMHQIK*NLK 182
S+ GQ+ + I+F++ C K L IC +N+ K Q+ LK
Sbjct: 610 SKESDVVGQSFEALILFVSLALCT----KIPPSITVLEDLIICRKNALQKSKEQVNEELK 665
Query: 183 YQDV 194
+QDV
Sbjct: 666 WQDV 669
>AY070571-1|AAL48042.1| 550|Drosophila melanogaster RE11317p
protein.
Length = 550
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 215 LKRPSGVRGLSSRP*R*QQLDWDGFYAVPR 304
L+RP RG+S+ P +LD D Y PR
Sbjct: 295 LRRPRLFRGVSATPDNGNELDRDWLYRKPR 324
>AY051462-1|AAK92886.1| 715|Drosophila melanogaster GH13229p
protein.
Length = 715
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 215 LKRPSGVRGLSSRP*R*QQLDWDGFYAVPR 304
L+RP RG+S+ P +LD D Y PR
Sbjct: 434 LRRPRLFRGVSATPDNGNELDRDWLYRKPR 463
>AE014296-778|AAX52730.2| 660|Drosophila melanogaster CG33545-PA
protein.
Length = 660
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -2
Query: 335 APSVATALIMVGEPRRSHPSPAVVSAMDVRIIPLHRSASSNRTPLFSDILVLEI 174
APSV L++ P S P P+ S + S+S TP+ ++ + I
Sbjct: 300 APSVPLPLVLPPNPLTSSPHPSANSNLPANTAHQVSSSSPQLTPVLTEAQIQRI 353
>AE014134-1610|AAO41178.1| 550|Drosophila melanogaster CG32982-PB,
isoform B protein.
Length = 550
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 215 LKRPSGVRGLSSRP*R*QQLDWDGFYAVPR 304
L+RP RG+S+ P +LD D Y PR
Sbjct: 295 LRRPRLFRGVSATPDNGNELDRDWLYRKPR 324
>AE014134-1609|ABI31303.1| 571|Drosophila melanogaster CG32982-PC,
isoform C protein.
Length = 571
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 215 LKRPSGVRGLSSRP*R*QQLDWDGFYAVPR 304
L+RP RG+S+ P +LD D Y PR
Sbjct: 316 LRRPRLFRGVSATPDNGNELDRDWLYRKPR 345
>AE014134-1607|AAF52751.2| 715|Drosophila melanogaster CG32982-PA,
isoform A protein.
Length = 715
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 215 LKRPSGVRGLSSRP*R*QQLDWDGFYAVPR 304
L+RP RG+S+ P +LD D Y PR
Sbjct: 434 LRRPRLFRGVSATPDNGNELDRDWLYRKPR 463
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,163,932
Number of Sequences: 53049
Number of extensions: 308784
Number of successful extensions: 629
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -