Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0560
(723 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 29 0.19
AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical prote... 24 4.1
AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosens... 24 4.1
AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosens... 24 4.1
U21917-1|AAA73920.1| 271|Anopheles gambiae serine protease prot... 23 7.2
AY604022-1|AAT38516.1| 172|Anopheles gambiae LZ3788P protein. 23 7.2
AY330175-1|AAQ16281.1| 200|Anopheles gambiae odorant-binding pr... 23 7.2
AJ618919-1|CAF01998.1| 200|Anopheles gambiae putative odorant-b... 23 7.2
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 23 9.6
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 9.6
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
promoter protein.
Length = 1197
Score = 28.7 bits (61), Expect = 0.19
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = -1
Query: 585 EEDLTACYRLG---SNTNKPRPILVRFLSLRRCNE 490
+E +TA +LG S+T P P LV F S+ CNE
Sbjct: 1154 DERMTARPKLGRTPSDTGGPTPHLVTFQSIMECNE 1188
>AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical protein
protein.
Length = 122
Score = 24.2 bits (50), Expect = 4.1
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -1
Query: 369 TTDGKIIVLLPDNKRCKIEQMFELQHLKTKFPSAQKAQGAPQSSGKSHD--EPKTAPKSA 196
T +G+ + LPD + E+ E Q ++ A + PQ K D +P+ KS
Sbjct: 55 TQEGRELKTLPDALKTNCEKCSEKQRTSSRKVIAHLEERKPQEWKKLLDKYDPEGIYKSK 114
Query: 195 AEREIGKRT 169
E+ I KR+
Sbjct: 115 FEK-INKRS 122
>AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosensory
protein CSP2 protein.
Length = 122
Score = 24.2 bits (50), Expect = 4.1
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -1
Query: 369 TTDGKIIVLLPDNKRCKIEQMFELQHLKTKFPSAQKAQGAPQSSGKSHD--EPKTAPKSA 196
T +G+ + LPD + E+ E Q ++ A + PQ K D +P+ KS
Sbjct: 55 TQEGRELKTLPDALKTNCEKCSEKQRTSSRKVIAHLEERKPQEWKKLLDKYDPEGIYKSK 114
Query: 195 AEREIGKRT 169
E+ I KR+
Sbjct: 115 FEK-INKRS 122
>AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosensory
protein CSP1 protein.
Length = 122
Score = 24.2 bits (50), Expect = 4.1
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -1
Query: 369 TTDGKIIVLLPDNKRCKIEQMFELQHLKTKFPSAQKAQGAPQSSGKSHD--EPKTAPKSA 196
T +G+ + LPD + E+ E Q ++ A + PQ K D +P+ KS
Sbjct: 55 TQEGRELKTLPDALKTNCEKCSEKQRTSSRKVIAHLEERKPQEWKKLLDKYDPEGIYKSK 114
Query: 195 AEREIGKRT 169
E+ I KR+
Sbjct: 115 FEK-INKRS 122
>U21917-1|AAA73920.1| 271|Anopheles gambiae serine protease
protein.
Length = 271
Score = 23.4 bits (48), Expect = 7.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 635 VAGSVASDSGIP*NRRTLRRDAISC 709
V GSVAS+ P LR +A++C
Sbjct: 51 VGGSVASEGQFPHQVALLRGNALTC 75
>AY604022-1|AAT38516.1| 172|Anopheles gambiae LZ3788P protein.
Length = 172
Score = 23.4 bits (48), Expect = 7.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 684 PYDATPSHACPTP 722
P D P+ CPTP
Sbjct: 10 PVDTNPAECCPTP 22
>AY330175-1|AAQ16281.1| 200|Anopheles gambiae odorant-binding
protein AgamOBP48 protein.
Length = 200
Score = 23.4 bits (48), Expect = 7.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 684 PYDATPSHACPTP 722
P D P+ CPTP
Sbjct: 38 PVDTNPAECCPTP 50
>AJ618919-1|CAF01998.1| 200|Anopheles gambiae putative
odorant-binding protein OBP3788 protein.
Length = 200
Score = 23.4 bits (48), Expect = 7.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 684 PYDATPSHACPTP 722
P D P+ CPTP
Sbjct: 38 PVDTNPAECCPTP 50
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 23.0 bits (47), Expect = 9.6
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -2
Query: 236 GNLMTNPRRHQNQRQSEKSARGRLVESSMAVS*TY 132
G+ ++HQ Q+Q K + L+E S + T+
Sbjct: 364 GSSQQQQQQHQQQQQKRKRPKPELIEISPGQNETF 398
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 399 RSHFGVKRCWTTDGKII 349
R+HFG ++ WT D +I
Sbjct: 1345 RNHFGKEKKWTFDKTLI 1361
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,308
Number of Sequences: 2352
Number of extensions: 15880
Number of successful extensions: 49
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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