Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0560
(723 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p pro... 32 0.69
BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p pro... 32 0.69
AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation ... 32 0.69
AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation ... 32 0.69
AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-P... 32 0.69
AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-P... 32 0.69
AY071422-1|AAL49044.1| 318|Drosophila melanogaster RE50056p pro... 30 3.7
AE014298-1937|AAF48299.1| 340|Drosophila melanogaster CG11164-P... 30 3.7
AE014134-630|AAF51090.1| 807|Drosophila melanogaster CG15415-PA... 29 6.4
AF160917-1|AAD46857.2| 620|Drosophila melanogaster LD09009p pro... 29 8.5
AE014297-4003|AAN14091.1| 599|Drosophila melanogaster CG6386-PB... 29 8.5
AE014297-4002|AAF56630.2| 599|Drosophila melanogaster CG6386-PA... 29 8.5
>BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p
protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.69
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Frame = -1
Query: 507 LRRCNEVWKNKTLLKGSRVIISEFLTKSR----HDVFLE--ARSHFG-VKRCWTT---DG 358
L++ N+ ++ T L G R+ +++ + S ++ LE RS FG V R + T
Sbjct: 155 LQQLNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQK 214
Query: 357 KIIVLLPDNKRCKIEQMFELQ---HLKTKFPSAQKAQGAPQSSG-KSHDEPKTAPKSAAE 190
++ ++ D K C+ +F+ + + K +A+ Q A Q K E K APK AAE
Sbjct: 215 QVQAVVKDYKLCEKALVFDPKKYAEFQAKTGAAKPQQQAQQQKQEKKPKEKKEAPKKAAE 274
>BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p
protein.
Length = 460
Score = 32.3 bits (70), Expect = 0.69
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Frame = -1
Query: 507 LRRCNEVWKNKTLLKGSRVIISEFLTKSR----HDVFLE--ARSHFG-VKRCWTT---DG 358
L++ N+ ++ T L G R+ +++ + S ++ LE RS FG V R + T
Sbjct: 164 LQQLNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQK 223
Query: 357 KIIVLLPDNKRCKIEQMFELQ---HLKTKFPSAQKAQGAPQSSG-KSHDEPKTAPKSAAE 190
++ ++ D K C+ +F+ + + K +A+ Q A Q K E K APK AAE
Sbjct: 224 QVQAVVKDYKLCEKALVFDPKKYAEFQAKTGAAKPQQQAQQQKQEKKPKEKKEAPKKAAE 283
>AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 431
Score = 32.3 bits (70), Expect = 0.69
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Frame = -1
Query: 507 LRRCNEVWKNKTLLKGSRVIISEFLTKSR----HDVFLE--ARSHFG-VKRCWTT---DG 358
L++ N+ ++ T L G R+ +++ + S ++ LE RS FG V R + T
Sbjct: 135 LQQLNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQK 194
Query: 357 KIIVLLPDNKRCKIEQMFELQ---HLKTKFPSAQKAQGAPQSSG-KSHDEPKTAPKSAAE 190
++ ++ D K C+ +F+ + + K +A+ Q A Q K E K APK AAE
Sbjct: 195 QVQAVVKDYKLCEKALVFDPKKYAEFQAKTGAAKPQQQAQQQKQEKKPKEKKEAPKKAAE 254
>AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 360
Score = 32.3 bits (70), Expect = 0.69
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Frame = -1
Query: 507 LRRCNEVWKNKTLLKGSRVIISEFLTKSR----HDVFLE--ARSHFG-VKRCWTT---DG 358
L++ N+ ++ T L G R+ +++ + S ++ LE RS FG V R + T
Sbjct: 64 LQQLNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQK 123
Query: 357 KIIVLLPDNKRCKIEQMFELQ---HLKTKFPSAQKAQGAPQSSG-KSHDEPKTAPKSAAE 190
++ ++ D K C+ +F+ + + K +A+ Q A Q K E K APK AAE
Sbjct: 124 QVQAVVKDYKLCEKALVFDPKKYAEFQAKTGAAKPQQQAQQQKQEKKPKEKKEAPKKAAE 183
>AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-PB,
isoform B protein.
Length = 431
Score = 32.3 bits (70), Expect = 0.69
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Frame = -1
Query: 507 LRRCNEVWKNKTLLKGSRVIISEFLTKSR----HDVFLE--ARSHFG-VKRCWTT---DG 358
L++ N+ ++ T L G R+ +++ + S ++ LE RS FG V R + T
Sbjct: 135 LQQLNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQK 194
Query: 357 KIIVLLPDNKRCKIEQMFELQ---HLKTKFPSAQKAQGAPQSSG-KSHDEPKTAPKSAAE 190
++ ++ D K C+ +F+ + + K +A+ Q A Q K E K APK AAE
Sbjct: 195 QVQAVVKDYKLCEKALVFDPKKYAEFQAKTGAAKPQQQAQQQKQEKKPKEKKEAPKKAAE 254
>AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-PA,
isoform A protein.
Length = 431
Score = 32.3 bits (70), Expect = 0.69
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Frame = -1
Query: 507 LRRCNEVWKNKTLLKGSRVIISEFLTKSR----HDVFLE--ARSHFG-VKRCWTT---DG 358
L++ N+ ++ T L G R+ +++ + S ++ LE RS FG V R + T
Sbjct: 135 LQQLNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQK 194
Query: 357 KIIVLLPDNKRCKIEQMFELQ---HLKTKFPSAQKAQGAPQSSG-KSHDEPKTAPKSAAE 190
++ ++ D K C+ +F+ + + K +A+ Q A Q K E K APK AAE
Sbjct: 195 QVQAVVKDYKLCEKALVFDPKKYAEFQAKTGAAKPQQQAQQQKQEKKPKEKKEAPKKAAE 254
>AY071422-1|AAL49044.1| 318|Drosophila melanogaster RE50056p
protein.
Length = 318
Score = 29.9 bits (64), Expect = 3.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 216 WVRHEISQMTEELLALFEPRETWFSDAEVQTSVQSY 323
++ H +M E L+A EPR +WF D+EV ++ + Y
Sbjct: 43 FITHPDGRMME-LVAFTEPRRSWFVDSEVCSNGRIY 77
>AE014298-1937|AAF48299.1| 340|Drosophila melanogaster CG11164-PA
protein.
Length = 340
Score = 29.9 bits (64), Expect = 3.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 216 WVRHEISQMTEELLALFEPRETWFSDAEVQTSVQSY 323
++ H +M E L+A EPR +WF D+EV ++ + Y
Sbjct: 65 FITHPDGRMME-LVAFTEPRRSWFVDSEVCSNGRIY 99
>AE014134-630|AAF51090.1| 807|Drosophila melanogaster CG15415-PA
protein.
Length = 807
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 291 LKTKFPS-AQKAQGAPQSSGKSHDEPKTAPKSAAE 190
LKT P A +P SS + H P+T+ KSAAE
Sbjct: 448 LKTALPRIVSVAAQSPSSSAQLHTHPETSLKSAAE 482
>AF160917-1|AAD46857.2| 620|Drosophila melanogaster LD09009p
protein.
Length = 620
Score = 28.7 bits (61), Expect = 8.5
Identities = 32/151 (21%), Positives = 56/151 (37%)
Frame = -1
Query: 609 QMKVAGCTEEDLTACYRLGSNTNKPRPILVRFLSLRRCNEVWKNKTLLKGSRVIISEFLT 430
Q+K+ + D + SN N P + + R+ ++ + +L S + E ++
Sbjct: 355 QLKIPNNGDLDFKMKPQTSSNNNLSPPGTSKAATARKAKKI--DSPVLNSS---LDEKIS 409
Query: 429 KSRHDVFLEARSHFGVKRCWTTDGKIIVLLPDNKRCKIEQMFELQHLKTKFPSAQKAQGA 250
S D E +SH T + KR + +KT+ S + +
Sbjct: 410 ASEDDEEEEEKSHRKKTAKKVTPSARNAKVSPLKRVADSSPPSQKRVKTEPKSTPRERAT 469
Query: 249 PQSSGKSHDEPKTAPKSAAEREIGKRTTRRK 157
P++S K PK +PK RT K
Sbjct: 470 PKASPKPRSTPKASPKPQTPTAARLRTPNAK 500
>AE014297-4003|AAN14091.1| 599|Drosophila melanogaster CG6386-PB,
isoform B protein.
Length = 599
Score = 28.7 bits (61), Expect = 8.5
Identities = 32/151 (21%), Positives = 56/151 (37%)
Frame = -1
Query: 609 QMKVAGCTEEDLTACYRLGSNTNKPRPILVRFLSLRRCNEVWKNKTLLKGSRVIISEFLT 430
Q+K+ + D + SN N P + + R+ ++ + +L S + E ++
Sbjct: 334 QLKIPNNGDLDFKMKPQTSSNNNLSPPGTSKAATARKAKKI--DSPVLNSS---LDEKIS 388
Query: 429 KSRHDVFLEARSHFGVKRCWTTDGKIIVLLPDNKRCKIEQMFELQHLKTKFPSAQKAQGA 250
S D E +SH T + KR + +KT+ S + +
Sbjct: 389 ASEDDEEEEEKSHRKKTAKKVTPSARNAKVSPLKRVADSSPPSQKRVKTEPKSTPRERAT 448
Query: 249 PQSSGKSHDEPKTAPKSAAEREIGKRTTRRK 157
P++S K PK +PK RT K
Sbjct: 449 PKASPKPRSTPKASPKPQTPTAARLRTPNAK 479
>AE014297-4002|AAF56630.2| 599|Drosophila melanogaster CG6386-PA,
isoform A protein.
Length = 599
Score = 28.7 bits (61), Expect = 8.5
Identities = 32/151 (21%), Positives = 56/151 (37%)
Frame = -1
Query: 609 QMKVAGCTEEDLTACYRLGSNTNKPRPILVRFLSLRRCNEVWKNKTLLKGSRVIISEFLT 430
Q+K+ + D + SN N P + + R+ ++ + +L S + E ++
Sbjct: 334 QLKIPNNGDLDFKMKPQTSSNNNLSPPGTSKAATARKAKKI--DSPVLNSS---LDEKIS 388
Query: 429 KSRHDVFLEARSHFGVKRCWTTDGKIIVLLPDNKRCKIEQMFELQHLKTKFPSAQKAQGA 250
S D E +SH T + KR + +KT+ S + +
Sbjct: 389 ASEDDEEEEEKSHRKKTAKKVTPSARNAKVSPLKRVADSSPPSQKRVKTEPKSTPRERAT 448
Query: 249 PQSSGKSHDEPKTAPKSAAEREIGKRTTRRK 157
P++S K PK +PK RT K
Sbjct: 449 PKASPKPRSTPKASPKPQTPTAARLRTPNAK 479
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,482,615
Number of Sequences: 53049
Number of extensions: 724765
Number of successful extensions: 1972
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1964
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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