Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0559
(709 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 24 1.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 24 1.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 24 1.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 24 1.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 1.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 1.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 1.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 1.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 1.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 1.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 24 1.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 1.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 1.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 1.6
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.6
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 8.7
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 187 VNIKKSGNESKKYATSSNSLRSRTHGFQH 215
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 187 VNIKKSGNESKKYATSSNSLRSRTHGFQH 215
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 187 VNIKKSGNESKKYATSSNSLRSRTHGFQH 215
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 198 VNIEKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 198 VNIEKSGNESKKYATSSNSLRSRTHGFQH 226
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 560 IKLFKALNYSKKY*TISKNFISRTKSRKH 474
+ + K+ N SKKY T S + SRT +H
Sbjct: 198 VNIEKSGNESKKYATSSNSLRSRTHDFQH 226
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = -3
Query: 572 INKRIKLFKALNYSKKY*TISKNFISRTKSRKHALL 465
+N ++ ALN+ T+ +N + +R HA++
Sbjct: 79 LNAKVSEIAALNHKFSSVTLYRNKTVKYSARMHAII 114
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,970
Number of Sequences: 438
Number of extensions: 3924
Number of successful extensions: 27
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -