Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0558
(775 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 42 4e-04
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 41 0.001
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 37 0.016
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 36 0.028
SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026) 36 0.048
SB_20305| Best HMM Match : PT (HMM E-Value=1.8) 35 0.084
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.084
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 35 0.084
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 33 0.19
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 33 0.19
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 33 0.26
SB_34673| Best HMM Match : UK (HMM E-Value=0.6) 33 0.26
SB_38797| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 33 0.34
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_15610| Best HMM Match : DUF1174 (HMM E-Value=7.8) 33 0.34
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 32 0.45
SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2) 32 0.59
SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061) 31 0.78
SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11) 31 1.0
SB_8499| Best HMM Match : DUF229 (HMM E-Value=0) 31 1.0
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 31 1.0
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_54710| Best HMM Match : Linker_histone (HMM E-Value=6e-38) 30 1.8
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 30 1.8
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 30 1.8
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 30 1.8
SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0) 30 1.8
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 30 2.4
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 30 2.4
SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07) 30 2.4
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 29 3.2
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 3.2
SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21) 29 3.2
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7) 29 4.2
SB_45281| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_7395| Best HMM Match : SURF6 (HMM E-Value=1.8) 29 5.5
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 29 5.5
SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069) 29 5.5
SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22) 29 5.5
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058) 28 7.3
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 28 7.3
SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_43840| Best HMM Match : NDK (HMM E-Value=0) 28 9.6
SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 28 9.6
SB_5548| Best HMM Match : PT (HMM E-Value=3.1) 28 9.6
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 44.4 bits (100), Expect = 1e-04
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Frame = +1
Query: 418 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKP-SATDAEGSADSAAIIPNMVKKI 594
A + A++ +EE Q ED++ V+ A + K E P T+A D A K +
Sbjct: 1172 ASVEEAEVPIEEAETQAEDTEGPVEDAEASVQKAEAPVEETEAPFEEDEAP-AEKTEKPV 1230
Query: 595 DLAPNVESDAAAVPEIKTP--EAADAPKLADNPVDEDKPA-DISPDAPKAEAKSADD 756
+ P+V+ A V E + P EA + A++P ++ P + + EA DD
Sbjct: 1231 EAGPSVQEAEAPVKETERPVEEAEVQAEEAESPAEKGAPVEEAETREEETEATKEDD 1287
Score = 38.3 bits (85), Expect = 0.007
Identities = 35/122 (28%), Positives = 60/122 (49%)
Frame = +1
Query: 400 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 579
++E+P +A ++ + E PAA+PE + E +A V + + EE P A + E + D
Sbjct: 587 TAEVPIEDADTSTEEAESPAAEPEVAVKEAEAPVEDDAFEE-PEALN-EKAEDPKDEDET 644
Query: 580 MVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDS 759
+K ++ P E++A A E+ E A + A+ V+E K + +AEA
Sbjct: 645 QEEKAEV-PIDEAEAEAQAEVAGEEKA-LEEEAETLVEETKVEEDKAPIQEAEASVKKAE 702
Query: 760 AT 765
AT
Sbjct: 703 AT 704
Score = 38.3 bits (85), Expect = 0.007
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Frame = +1
Query: 397 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 576
K +E P EA++ + EEP + E S V+ T A I + E P E S + A
Sbjct: 1098 KEAEAPVEEAEAPAEETEEPVKEAEAS---VEITEAPIEEAEAPDER-VESSVEEAEAPE 1153
Query: 577 NMVKK--IDLAPNVESDAAAVPEIKTP--EAADAPKLADNPVDEDKPADISPDAP--KAE 738
VK ++ VE A+V E + P EA + + PV++ + + +AP + E
Sbjct: 1154 EEVKAPVEEVEAPVEEAVASVEEAEVPIEEAETQAEDTEGPVEDAEASVQKAEAPVEETE 1213
Query: 739 AKSADDSATTAK 774
A +D A K
Sbjct: 1214 APFEEDEAPAEK 1225
Score = 37.1 bits (82), Expect = 0.016
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = +1
Query: 415 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI 594
+AE + KVEE A ++++ V+ A + + E P E A S + VK+
Sbjct: 674 EAETLVEETKVEEDKAPIQEAEASVKKAEATVEEIEAPIERAKEVEAQSKEV-DAPVKEA 732
Query: 595 DLAPNVESDAAAVP-EIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATTA 771
+ AP E++A E+ +A + + A+ PVDE + + +AP EA++ + A ++
Sbjct: 733 E-APAGEAEAPVEESEVLVEKAEASVEEAEVPVDEVEASVEEAEAPAHEAEAPVEEAKSS 791
Score = 32.3 bits (70), Expect = 0.45
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = +1
Query: 421 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 600
+ K D EE A P D + E +A AE++ EEK +AE + + + +
Sbjct: 637 DPKDEDETQEEKAEVPID-EAEAEAQ-AEVAGEEKALEEEAETLVEETKVEEDKAPIQEA 694
Query: 601 APNVESDAAAVPEIKTP-----EAADAPKLADNPVDEDKPADISPDAPKAEAK 744
+V+ A V EI+ P E K D PV E + +AP E++
Sbjct: 695 EASVKKAEATVEEIEAPIERAKEVEAQSKEVDAPVKEAEAPAGEAEAPVEESE 747
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Frame = +1
Query: 397 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 576
+ +++ E ++ D+ +EP + E +A+ E K T+ A+ P
Sbjct: 165 EENDMGGTEEENPDVPSDEPLTGGTEEDDEKEASEEEEGKPSLEDGTEDTPEANKTPEEP 224
Query: 577 NMVKKI--DLAPNVESDAA--AVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAK 744
+K+ + P E+ A E++ P+ ++PK D P +ED P + D PK EAK
Sbjct: 225 KEDEKVTEEETPKEETPKVEDAPEEVEAPKEEESPKEEDTPKEEDAPKE---DTPKEEAK 281
>SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98)
Length = 242
Score = 42.3 bits (95), Expect = 4e-04
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Frame = +1
Query: 406 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 585
E P EA+S D KVE P + E + EV+ATV E+ + +A E + I
Sbjct: 22 ETPIEEAESPDKKVEAPIEEAEAPEEEVEATVEEVEAPMEEAAASVEEA--EVPIEKAET 79
Query: 586 KKIDLAPNVESDAAAVPEIKT--PEAADAPKLADNPVDEDKPADISPDAPKAEAKSA 750
+ +D VE+ + E + E + K A+ +E + + + P EAK++
Sbjct: 80 QPVDTEGPVENAETSFEEAEAADEETEEPVKEAEGSFEEAEAPVVETEEPVKEAKAS 136
Score = 35.5 bits (78), Expect = 0.048
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Frame = +1
Query: 397 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 576
+ +E+P +A++ + E P E S E +A E + K +AEGS + A
Sbjct: 68 EEAEVPIEKAETQPVDTEGPVENAETSFEEAEAADEETEEPVK----EAEGSFEEAE--- 120
Query: 577 NMVKKIDLAPNVESDAAAVPEIKTP-EAADAPKLADNPVDEDKPADISPDAPKAEAKSAD 753
++ V+ A+V + P E A AP+ ++ V+E + + +AP E ++
Sbjct: 121 --APVVETEEPVKEAKASVEITEAPIEEAKAPERVESSVEEAEAPEEEVEAPVEEVEAPV 178
Query: 754 DSATTA 771
+ A +
Sbjct: 179 EEAVAS 184
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/102 (21%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +1
Query: 472 DSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTP 651
+++T + T A + + E T E + + +++ + AP E +A V E++ P
Sbjct: 2 EARTPAEETEAPVEEAEALGETPIEEAESPDKKVEAPIEEAE-APEEEVEAT-VEEVEAP 59
Query: 652 --EAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATTA 771
EAA + + A+ P+++ + + + P A+++ + A A
Sbjct: 60 MEEAAASVEEAEVPIEKAETQPVDTEGPVENAETSFEEAEAA 101
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Frame = +1
Query: 448 EEPA--AQPEDSKTEVQATVAEISKEEK--PSATDAEGSADSAAIIPNMVKKIDLAPNVE 615
E+P+ +P + K +++A E + + K P A G D+ P VE
Sbjct: 85 EKPSLDTKPAEDKPKIEAAKQEATADNKAEPKKEQASGIKDAPEATPKKGADKATPKEVE 144
Query: 616 SDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATTAK 774
+ V + +A K NP EDKPA+ + + AK S T+ K
Sbjct: 145 ASGDEVASEAEAKPVEAAKTESNPAKEDKPAEKAKEDKAGPAKEDKPSKTSPK 197
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 37.1 bits (82), Expect = 0.016
Identities = 32/124 (25%), Positives = 51/124 (41%)
Frame = +1
Query: 394 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 573
AK + +A K A + + V ATVA S + T + S D+A +I
Sbjct: 1732 AKITPKASTDAAKVTPKASTEATEMTQKFSNVPATVALKSSNVEAKITP-KSSTDAARLI 1790
Query: 574 PNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSAD 753
P K + NV+S ++ TP+A+ + + D ++P A AK A
Sbjct: 1791 PKASKSSTGSVNVKSRSSTNATQITPKASTGTQKVRHKSSTDAVKKVTPKASTDAAKVAS 1850
Query: 754 DSAT 765
S+T
Sbjct: 1851 KSST 1854
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 36.3 bits (80), Expect = 0.028
Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 11/170 (6%)
Frame = +1
Query: 295 IPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKS-ADIKVEEPAAQ-P 468
+P D + P SD+ + ++ KS +D +V P++ P
Sbjct: 591 VPTTSDDQVTPSASDVPTTSDDQVTPSASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVP 650
Query: 469 EDSKTEVQATVAEISKEEK----PSATDAEGSAD-----SAAIIPNMVKKIDLAPNVESD 621
S +V + +++ PSA+D ++D SA+ +P + P+
Sbjct: 651 TTSDDQVTPSASDVPTTSDDHVTPSASDVPTTSDDQVTPSASDVP-AASDNQVTPSASDV 709
Query: 622 AAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATTA 771
+A + TP A D P +DN V +D+ + SA D TT+
Sbjct: 710 PSASDDQVTPSAIDVPTTSDNQV-TPSASDVPTASDDQVTPSASDVPTTS 758
Score = 31.9 bits (69), Expect = 0.59
Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 5/129 (3%)
Frame = +1
Query: 400 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEE-KPSATDAEGSADSAAIIP 576
+S++P A + +D T + V S ++ P A+D ++D P
Sbjct: 736 ASDVPTASDDQVTPSASDVPTTSDDQVTPSASDVMSTSDDQVTPPASDVMSTSDDQVTPP 795
Query: 577 NM----VKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAK 744
+ P+ A + TP A+D P +DN V +D+ +
Sbjct: 796 ASDVPTTSDDQITPSSSDVPATSDDQVTPPASDVPTASDNQV-TPSASDVPTTSDDHVTP 854
Query: 745 SADDSATTA 771
SA D TT+
Sbjct: 855 SASDVPTTS 863
Score = 31.1 bits (67), Expect = 1.0
Identities = 37/176 (21%), Positives = 68/176 (38%), Gaps = 10/176 (5%)
Frame = +1
Query: 274 SNDEV--PA--IPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADI 441
S+D+V PA +P A + + P SD+ +S++P
Sbjct: 818 SDDQVTPPASDVPTASDNQVTPSASDVPTTSDDHVTP--------SASDVPTTSDDQVTP 869
Query: 442 KVEEPAAQPEDSKTEVQATVAEISKEE-KPSATDAEGSAD-----SAAIIPNMVKKIDLA 603
+ +D T + V S ++ PSA+D ++D SA+ +P +
Sbjct: 870 SASDVTPTSDDQVTPSSSDVTPTSDDQVTPSASDVPTASDDQVTQSASNVPTASDN-QVT 928
Query: 604 PNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATTA 771
P+ A + TP A+D P +D+ V + +D++ + A D T+
Sbjct: 929 PSASDVLTAKDDHVTPSASDVPTTSDDQVTQ-SASDVTSTSDNQITPFASDFTPTS 983
Score = 28.7 bits (61), Expect = 5.5
Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 11/134 (8%)
Frame = +1
Query: 400 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEE-KPSATDAEGSADSAAIIP 576
+S++P + +D T + V S + PSA+D ++D + P
Sbjct: 661 ASDVPTTSDDHVTPSASDVPTTSDDQVTPSASDVPAASDNQVTPSASDVPSASDDQ-VTP 719
Query: 577 NMVKKIDLAPN-VESDAAAVPEIK----TPEAADAPKLADNPV-----DEDKPADISPDA 726
+ + + N V A+ VP TP A+D P +D+ V D +D
Sbjct: 720 SAIDVPTTSDNQVTPSASDVPTASDDQVTPSASDVPTTSDDQVTPSASDVMSTSDDQVTP 779
Query: 727 PKAEAKSADDSATT 768
P ++ S D T
Sbjct: 780 PASDVMSTSDDQVT 793
>SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026)
Length = 521
Score = 35.5 bits (78), Expect = 0.048
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 655 AADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATTA 771
A D+ K + P DED+P D+ P P +++K ADD + A
Sbjct: 425 AVDSAKKEEPPKDEDQPGDVEP--PISDSKDADDKTSDA 461
>SB_20305| Best HMM Match : PT (HMM E-Value=1.8)
Length = 127
Score = 34.7 bits (76), Expect = 0.084
Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 2/107 (1%)
Frame = +1
Query: 418 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 597
+E KS D ++P +PED + E E+KP + D P K++
Sbjct: 25 SEDKSGDKPQDKPENKPEDQPEDKPGDKPEDKTEDKPEDKPEDKPEDKPEDKPE--DKLE 82
Query: 598 LAPNVESDAAAVPEIKTPEAADAPKLADNPVD--EDKPADISPDAPK 732
P E + PE PE K D P D EDKP D PK
Sbjct: 83 DKP--EDSSEEKPE-DNPEDKPEYKPEDKPEDKPEDKPECKPEDKPK 126
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 34.7 bits (76), Expect = 0.084
Identities = 17/73 (23%), Positives = 37/73 (50%)
Frame = +1
Query: 424 AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 603
AKS D+K E A++ ++ T+ ++ K+ KP++ + A +A + N K +++
Sbjct: 1912 AKSKDVKNAEEASRNDEDDTKTGNVSEDLIKQAKPTSKTRKKRASLSAKVTNFEKTVNVD 1971
Query: 604 PNVESDAAAVPEI 642
+S +P +
Sbjct: 1972 VESQSSERELPRV 1984
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 34.7 bits (76), Expect = 0.084
Identities = 33/116 (28%), Positives = 43/116 (37%), Gaps = 4/116 (3%)
Frame = +1
Query: 421 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 600
E + D ++P +PED + E E KP S D +P + +
Sbjct: 137 EDRPEDHPEDKPDDKPEDKPEDKPEDKLEGKPENKPEKKPKAKSEDKPEDMPEDMPEDKP 196
Query: 601 APNVESDAAAVPEIKTPEAADAPKLADNPVD--EDKPADISPDAP--KAEAKSADD 756
E PE K PE K D P D +DKP D D P K E K D+
Sbjct: 197 EYRPEYKPEDKPE-KKPEKKPEDKSEDKPEDKHKDKPEDKLEDKPEDKKEEKPEDN 251
Score = 30.3 bits (65), Expect = 1.8
Identities = 31/113 (27%), Positives = 44/113 (38%)
Frame = +1
Query: 421 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 600
+AKS D + P PED K E + E E+KP + D + P K
Sbjct: 177 KAKSEDKPEDMPEDMPED-KPEYRP---EYKPEDKPEKKPEKKPEDKSEDKPEDKHKDKP 232
Query: 601 APNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDS 759
+E E K PE D P+ EDKP D D P+ + + ++
Sbjct: 233 EDKLEDKPEDKKEEK-PE--DNPEEKPEDKQEDKPEDKQEDKPECKPEDKPEN 282
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 33.5 bits (73), Expect = 0.19
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 8/158 (5%)
Frame = +1
Query: 280 DEVPA-IP-EAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEE 453
+EVP +P E+ ++ P SDI + EI ++ + +++
Sbjct: 1375 EEVPTDVPTESPSAEVKPVQSDIVESTSDEAPAEDLVE--SHKEEIMPVQSDAIQSTLDK 1432
Query: 454 PAAQPE---DSKTEVQATVAEIS--KEEKPS-ATDAEGSADSAAIIPNMVKKIDLAPNVE 615
AAQ + S EVQA V+ S KE P + + + + + ++D E
Sbjct: 1433 EAAQSKVIASSPEEVQADVSVESPNKETLPGQSVHIDSTQEEVPVEAQPESRVDQNQTPE 1492
Query: 616 SDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAP 729
S A + PE AP P P+D+SP P
Sbjct: 1493 SLLPAEYLVAPPEEQPAPAAEPEPSPGGSPSDLSPTDP 1530
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 33.5 bits (73), Expect = 0.19
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 8/158 (5%)
Frame = +1
Query: 280 DEVPA-IP-EAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEE 453
+EVP +P E+ ++ P SDI + EI ++ + +++
Sbjct: 270 EEVPTDVPTESPSAEVKPVQSDIVESTSDEAPAEDLVE--SHKEEIMPVQSDAIQSTLDK 327
Query: 454 PAAQPE---DSKTEVQATVAEIS--KEEKPS-ATDAEGSADSAAIIPNMVKKIDLAPNVE 615
AAQ + S EVQA V+ S KE P + + + + + ++D E
Sbjct: 328 EAAQSKVIASSPEEVQADVSVESPNKETLPGQSVHIDSTQEEVPVEAQPESRVDQNQTPE 387
Query: 616 SDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAP 729
S A + PE AP P P+D+SP P
Sbjct: 388 SLLPAEYLVAPPEEQPAPAAEPEPSPGGSPSDLSPTDP 425
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 33.1 bits (72), Expect = 0.26
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = +1
Query: 487 VQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVES-DAAAVPEIKTPEAAD 663
V A +K K + AE S + A+ P + +P E+ D PE K A
Sbjct: 13 VAVNAAPATKANKHDSI-AEASDATEAVAP----EAPASPESENTDDFKEPEAKEETPAA 67
Query: 664 APKLADNPVDEDKPADISPDAPKAEAKSADD 756
APK D P E PD P + +S DD
Sbjct: 68 APKAEDTPALETSGESKLPDTPVEDEESEDD 98
Score = 31.1 bits (67), Expect = 1.0
Identities = 34/167 (20%), Positives = 59/167 (35%), Gaps = 9/167 (5%)
Frame = +1
Query: 283 EVPAIPEAKK-DDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPA 459
E PA PE++ DD ++ + S++PD + + + ++ +
Sbjct: 42 EAPASPESENTDDFKEPEAKEETPAAAPKAEDTPALETSGESKLPDTPVEDEESEDDDDS 101
Query: 460 -------AQPEDSKTEVQATVAEISKEEKPSAT-DAEGSADSAAIIPNMVKKIDLAPNVE 615
+D E + + +EK S DA + D A+ + K +
Sbjct: 102 FDDGDDEEDEDDEDDEEDSDDGDDEDDEKESGDGDAGNAKDEASGESDDAKPKTKDAEKK 161
Query: 616 SDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADD 756
D V E K E D K D ++DK D S ++ DD
Sbjct: 162 DDKKKVDEKKEDEKKDDDKKVDEKKEDDKKNDSSASGESEDSDDGDD 208
>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
Length = 641
Score = 33.1 bits (72), Expect = 0.26
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Frame = +1
Query: 397 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 576
++++ PD ++ D+ P E + + A + TD + P
Sbjct: 207 EATDEPDRPQETTDV----PGRSQEVTNAPDRQQEANDVSDRPQETTDVPDRSQEVTNTP 262
Query: 577 NMVKKIDLAPNVESDAAAVPEI--KTPEAADAPKLADNPVDEDKPADISPDAPKAEA 741
+ ++ + AP+ P+ KT + D P A + D + AD +PD P+ EA
Sbjct: 263 DRPQEANDAPDRPEKTIDAPDRSQKTTDTPDRPHEATDEPDRSQEADDTPDRPQKEA 319
>SB_38797| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 308
Score = 32.7 bits (71), Expect = 0.34
Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Frame = +1
Query: 409 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKP--SATDAEGSADSAAI--IP 576
+ +++ + V + + EV + AE+ E P + T+ E + + +
Sbjct: 47 VVESKPSEEETSVPSVVVNGDSHQEEVVQSSAEVVAESAPPPAQTETEDTTTPEEVKELS 106
Query: 577 NMVKKIDLAPNVESDAAAVPEI--KTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSA 750
N++ + D P ++A PE PE A P + KP + P + E A
Sbjct: 107 NVLDEQDTKPEEPAEAETAPEAVESVPEPAHEVVSESAPTEPPKPTEPEPSPAEPEPTPA 166
Query: 751 DDSA 762
+ S+
Sbjct: 167 EPSS 170
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 32.7 bits (71), Expect = 0.34
Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Frame = +1
Query: 394 AKSSEIPDAEAKSADIKV-EEPAAQPEDSKTEVQ----ATVAEISKE-EKPSAT--DAEG 549
A S A+A S V EE A+ E K EV + ++ IS + + AT DA G
Sbjct: 254 AASGYASGADAASGSNAVPEEVASGFEGRKDEVTLESGSGMSFISGDNDSAEATLEDATG 313
Query: 550 SADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDA- 726
+ +P I A N++ D A I + + APKL DN E + ++ A
Sbjct: 314 ESGDEDFLPG---SIGGATNLQQDEAKAQTISSGSGSAAPKLTDNAAKEVQQTPVAQAAE 370
Query: 727 --PKAEAKSADDSA 762
KA K+A D A
Sbjct: 371 VVAKAPVKAAKDVA 384
>SB_15610| Best HMM Match : DUF1174 (HMM E-Value=7.8)
Length = 200
Score = 32.7 bits (71), Expect = 0.34
Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Frame = +1
Query: 409 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKP--SATDAEGSADSAAI--IP 576
+ +++ + V + + EV + AE+ E P + T+ E + + +
Sbjct: 47 VVESKPSEEETSVPSVVVNGDSHQEEVVQSSAEVVAESAPPPAQTETEDTTTPEEVKELS 106
Query: 577 NMVKKIDLAPNVESDAAAVPEI--KTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSA 750
N++ + D P ++A PE PE A P + KP + P + E A
Sbjct: 107 NVLDEQDTKPEEPAEAETAPEAVESVPEPAHEVVSESAPTEPPKPTEPEPSPAEPEPTPA 166
Query: 751 DDSA 762
+ S+
Sbjct: 167 EPSS 170
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 32.3 bits (70), Expect = 0.45
Identities = 30/105 (28%), Positives = 37/105 (35%), Gaps = 3/105 (2%)
Frame = +1
Query: 427 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 606
KS D +P +PED + Q E E+KP + D K
Sbjct: 418 KSKDKLEVKPEDRPEDKPEDKQQNKPEDKPEDKPEDKPEDKPEDKPEDKQQNKPKYKPED 477
Query: 607 NVESDAAAVPEIK---TPEAADAPKLADNPVDEDKPADISPDAPK 732
E P+ K PE K DNP EDKP D D P+
Sbjct: 478 KPEDKPEDKPKDKLEDRPEDKPEEKSKDNP--EDKPEDRLEDRPE 520
>SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2)
Length = 623
Score = 31.9 bits (69), Expect = 0.59
Identities = 22/108 (20%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +1
Query: 421 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK--I 594
+ + D K++ E + ++ + + E S ++E S +++A K
Sbjct: 98 QTRIQDAKMDSEIVSKESERKKLSPEIGD-GIREVASEENSEKSIETSAASETATKSPST 156
Query: 595 DLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAE 738
+ + +SD V EI + + D+ K++ NP D +P D++ P ++
Sbjct: 157 ENTGSTKSDKDDVVEISSDD--DSDKISANPTDVQEPMDLTAPKPDSD 202
>SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061)
Length = 410
Score = 31.5 bits (68), Expect = 0.78
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 415 DAEAKSADIKVEEPAAQPEDSKT----EVQATVAEISKEEKPSATDAEGSADSAAIIP 576
DAE S+ I V P+AQ E +T V + +A ++ E D+ D AIIP
Sbjct: 285 DAEPASSSISVSVPSAQAEQGRTTEGRPVSSDIATVAMEVPEVQGDSLADVDIDAIIP 342
>SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11)
Length = 1771
Score = 31.1 bits (67), Expect = 1.0
Identities = 31/115 (26%), Positives = 53/115 (46%)
Frame = +1
Query: 403 SEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM 582
S IP+A + +E +P+D + V E+ + ++ DA+G A I +
Sbjct: 1005 SYIPEAVRELISPVDQESFMEPKDLELPVNEPDVEVYEPQQDIEIDADG---LRAQILSP 1061
Query: 583 VKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKS 747
+ +D +SDA+A E + + +DKP +SP+AP AEA+S
Sbjct: 1062 IMSVD----YDSDASANGGHMRREDPQNEESPPDIAKDDKP--LSPEAPIAEAES 1110
>SB_8499| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 926
Score = 31.1 bits (67), Expect = 1.0
Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 3/150 (2%)
Frame = +1
Query: 280 DEVPAIPEAKKDDIAP-EDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEP 456
D +P P+ + ++P ++ ++ A + P+A +A + E
Sbjct: 328 DSIPTAPKVFPEKLSPSKEREVTKQPEAPGATAQPEAPDATAQ--PEAPDATAQPEATET 385
Query: 457 AAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAV 633
AQPE K T + ++ E P AT A+ A A +P + P A
Sbjct: 386 TAQPEAPKATALPEAPKATAQPEAPEAT-AQPEAPKATALPE-APEATAQPEATETTAQP 443
Query: 634 PEIKTPEAADAPKLADNP-VDEDKPADISP 720
K +AP+ P ED P P
Sbjct: 444 KAQKATAQPEAPEATAQPEAPEDNPQVTHP 473
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +1
Query: 445 VEEPAAQPEDSKTEVQATV--AEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 606
+E PA ED KT+ +AT AE+ +E KP+A D + SA S ++ I+++P
Sbjct: 1129 LESPA---EDVKTDFEATSLEAEVFEEYKPTAKDVKESASSTV---HLAADIEISP 1178
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 5/132 (3%)
Frame = +1
Query: 394 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 573
++++E P E +PE + AE + + + + A +
Sbjct: 5112 SETTEAPGTTVAPETTMAPETTVEPETTMALETTVAAETTMAPETTVSPETTEAPGTTVA 5171
Query: 574 PN--MVKKIDLAPNVE-SDAAAVPEIKT--PEAADAPKLADNPVDEDKPADISPDAPKAE 738
P M + +AP + VP+ T PE+ +AP+ P + P +P+ A
Sbjct: 5172 PETTMAPETTVAPETTMAPETTVPQETTIAPESTEAPETTRAPESTEAPETTAPETTIAP 5231
Query: 739 AKSADDSATTAK 774
+ T A+
Sbjct: 5232 ETTIAPETTVAQ 5243
Score = 27.9 bits (59), Expect = 9.6
Identities = 27/125 (21%), Positives = 40/125 (32%), Gaps = 1/125 (0%)
Frame = +1
Query: 397 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 576
+++ +P+ E A PE + V E + P T A + + P
Sbjct: 3046 ETTAVPETTVSQETTVAPETTALPESTVAPETTVVPETTAV--PETTVMTTVAPDSTVAP 3103
Query: 577 NMVKKIDLAPNVESDAAAVPEIKT-PEAADAPKLADNPVDEDKPADISPDAPKAEAKSAD 753
V V ++ PE PE DAP+ P D P AE +
Sbjct: 3104 --VTTFAPGTTVTPESTVAPETTVLPETTDAPETTVPPETTDAPETTVASETTAEPDTTQ 3161
Query: 754 DSATT 768
TT
Sbjct: 3162 APETT 3166
>SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = +1
Query: 463 QPEDSKTEVQATVAEISK---EEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAV 633
Q +D K++ Q + + K + PS++D + + D K D+ PN +
Sbjct: 405 QDDDDKSDFQPSADGVDKTPDDGTPSSSDNDDTQDDD-------DKSDIQPNADG-VDKT 456
Query: 634 PEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATTA 771
P TP ++D D+ D+D +D P+A + DD+ +++
Sbjct: 457 PYDGTPSSSDN----DDTQDDDDKSDFQPNADGVDKTPDDDTPSSS 498
>SB_54710| Best HMM Match : Linker_histone (HMM E-Value=6e-38)
Length = 234
Score = 30.3 bits (65), Expect = 1.8
Identities = 37/131 (28%), Positives = 52/131 (39%), Gaps = 6/131 (4%)
Frame = +1
Query: 400 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDA--EGSADSAAII 573
S E+ DAE + K E+PA P+ S V A A KE S+ A + + +
Sbjct: 45 SIEMSDAEKPAKAKKPEKPAEHPKYSDMVVAAIGA--LKERNGSSRQAIEKYIKGNYKVG 102
Query: 574 PNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKL----ADNPVDEDKPADISPDAPKAEA 741
N+ ++ LA SD + K A+ + KL + P KPA P A K A
Sbjct: 103 DNVGVQLKLALKRMSDKGKLAHTKGVGASGSFKLNKAAVEKPKKAKKPASKKPKAAKKPA 162
Query: 742 KSADDSATTAK 774
AK
Sbjct: 163 AKKSPKKAAAK 173
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/120 (20%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Frame = +1
Query: 400 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEE---KPSATDAEGSADSAAI 570
SS + + K K + ++ +DS ++ + + ++ + S++D + S+D
Sbjct: 20 SSSDEEVKVKKDTKKATKGSSSEDDSSSDEEEVKPKKDAKKAATEDSSSDDDSSSDEEVK 79
Query: 571 IPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLA--DNPVDEDKPADISPDAPKAEAK 744
+ KK + E D+++ E P+ DA K A D+ D+D + + PK + +
Sbjct: 80 VKKDTKKATKGSSSEDDSSSDEEEVKPKK-DAKKAATEDSSSDDDSSGEDEDEKPKKKVE 138
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 30.3 bits (65), Expect = 1.8
Identities = 28/95 (29%), Positives = 31/95 (32%), Gaps = 2/95 (2%)
Frame = +1
Query: 496 TVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKL 675
T + S E P + G K L N D A PE K
Sbjct: 7 TSQKTSPETSPEISPKTGRKTDRKTSRKTSLKRSLTTNKPEDNADEKPEDNPEDKPEDKT 66
Query: 676 ADNPVDEDKPADISPDAPK--AEAKSADDSATTAK 774
D P EDKP D D PK + K D TT K
Sbjct: 67 EDRP--EDKPEDKLEDKPKENQQNKPEDKQQTTPK 99
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 30.3 bits (65), Expect = 1.8
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Frame = +1
Query: 403 SEIPDAE-AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEG-SADSAAIIP 576
S++P + AK+A+ + E+ A PE+ E A E K ++ D EG +AD A
Sbjct: 50 SKMPSKKGAKAAEAQPEKKAEAPEEKPAEDSKDQAVEESETKDASKDGEGNAADKRA--R 107
Query: 577 NMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADD 756
KK D P A + K + + P A V K + P+ +
Sbjct: 108 GRPKKADGEP-------ATKKPKKVKESHVPSRASRRVANMKTGETLPEIEDKDPMPKPK 160
Query: 757 SATTAK 774
TT K
Sbjct: 161 KTTTKK 166
>SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0)
Length = 636
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 397 KSSEIPDAEAKSADIKVEEPAA-QPEDSKT-EV---QATVAEISKEEKPSATDAEGSADS 561
K + D + S+D +E A +P S T EV T A + EE+PS TD EGS +
Sbjct: 359 KQTTAHDPTSSSSDQLIEHSVAGRPSPSVTPEVAREDCTQASLQLEERPSNTDGEGSGQT 418
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 29.9 bits (64), Expect = 2.4
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +1
Query: 400 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 579
SS P + KS+ EE ++P S + A + +EEK A+ S D P
Sbjct: 439 SSPAPQEDDKSSSA-TEEYKSEP--SSAQPSANQSPEPEEEKEEASPVP-SKDEEETSP- 493
Query: 580 MVKKIDLAPNVESDAAAVPEIKTPEAADAPKL-ADNPVDEDKP 705
M K + P PE + EAA+ + A +PV+ED P
Sbjct: 494 MPAKGEGTPEKREIEEESPEEEKGEAAEKAAVHAQSPVEEDAP 536
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 532 ATDAEGSAD-SAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPA 708
A D SA+ +I P++ + +DL +E D VP+I T A P P D PA
Sbjct: 246 ADDLAYSAELGPSIAPSVPQGLDLPDVLEHDIPEVPDIVTGGGAPVP--PPPPADGSAPA 303
Query: 709 DISPDAP 729
P P
Sbjct: 304 PPPPPPP 310
>SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07)
Length = 1188
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 412 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAA 567
PD +A + + + + P +Q EDS + T +S EE+P ++ S SAA
Sbjct: 915 PDPQAPATNNQTDNPPSQYEDSSS--SETNGVLSDEEQPPLPLSDSSIQSAA 964
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/75 (26%), Positives = 28/75 (37%)
Frame = +1
Query: 544 EGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPD 723
E + D + + MV K AP + A I A A + ED + PD
Sbjct: 127 EYNIDEKSFVVIMVAKPKPAPAAVAPAPVTTTIPQAATASPSTQASSTAQEDSKPEAKPD 186
Query: 724 APKAEAKSADDSATT 768
K+ + SATT
Sbjct: 187 EAKSTSTETAASATT 201
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 397 KSSEIPDAEAKSADIKVEEPAA-QPEDSK-TEVQATVAEISKEEKPSA-TDAEGSADSAA 567
K + D E K + + E+ + E +K TEVQ V E +KEE PS DAE A
Sbjct: 1025 KKRKDSDKERKVKEKEEEQKVKIEKEPNKVTEVQLMVEETNKEESPSTDRDAESELPKAG 1084
Query: 568 IIPNMVKKIDLAPN 609
+ ++ P+
Sbjct: 1085 SVSALLSVFATEPS 1098
>SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21)
Length = 595
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -3
Query: 527 GFSSFEISATVACTSVFESSG*AAGSSTLISADFASASGISDDF 396
G SS ++ +C+SVFE + A SS L AD + + IS ++
Sbjct: 498 GGSSSQMDVMGSCSSVFEQAMLAGESSNLSDADKSESKDISKNY 541
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Frame = +1
Query: 463 QPEDSKTEVQATVAEISKEEKPSATDAE------GSADSAAIIPNMVKKIDLAPNVESDA 624
+P+ S+ ++ + IS ++ +TD S A+ + +++AP SDA
Sbjct: 569 KPDQSEESIKKDRSPISPAQQVESTDGNVGDDEVSSGKEGAVSAGNDQDVEMAPATSSDA 628
Query: 625 AAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATTAK 774
+ + P ++ + ED+ ++ AE K + + K
Sbjct: 629 VSSDVVMKPIVSEQVSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVSPVK 678
>SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1569
Score = 29.1 bits (62), Expect = 4.2
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 3/119 (2%)
Frame = +1
Query: 400 SSEIPDAE-AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 576
++E+ DA+ A + VEE + K + T + K + AEG ++
Sbjct: 1356 ATEVEDAQTAIEEEAPVEEVQPKRATGKASAKPTRSTRGKRSQTDEAPAEGEKPTSTRRG 1415
Query: 577 NMVKKIDLAPNVESDAAAVPEIKTPEAADAP--KLADNPVDEDKPADISPDAPKAEAKS 747
K D++ V +A E K + K + P+ + A P A ++ KS
Sbjct: 1416 RKAAKKDISIEVIEEAVTAEEPKATRSTRGKKRKAEEEPIVVEAEAIEEPKAARSSRKS 1474
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 29.1 bits (62), Expect = 4.2
Identities = 30/132 (22%), Positives = 47/132 (35%), Gaps = 5/132 (3%)
Frame = +1
Query: 394 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 573
A+++ +P+ A V A PE + +V E + K +A +
Sbjct: 2979 AETTFVPETIATPETTTVPGTTAAPETTAVPESTSVPETTALPKTTAVPETTTPPETTAK 3038
Query: 574 PNMV--KKIDLAPNVES--DAAAVPEIKT-PEAADAPKLADNPVDEDKPADISPDAPKAE 738
P + AP + +A A PE + PE AP+ P P S A
Sbjct: 3039 PETTGAPETTSAPKTTAVPEATAAPETTSAPETTAAPETTSAPETTSVPETTSAPETTAL 3098
Query: 739 AKSADDSATTAK 774
++ TTAK
Sbjct: 3099 PETTASPETTAK 3110
>SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7)
Length = 704
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 640 IKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATTAK 774
+++P+ A + AD PV+ KPAD S +AK A+DS + K
Sbjct: 620 VESPDVKTASE-ADQPVEAKKPADKSAKEEPKDAK-AEDSKESLK 662
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +1
Query: 595 DLAPNVESDAAAVPEIKTPEAADAPKLADNPVD---EDKPADISPDAPKAEAKS 747
D + A P++KT AD P A P D +++P D + K KS
Sbjct: 610 DRKKQTDETAVESPDVKTASEADQPVEAKKPADKSAKEEPKDAKAEDSKESLKS 663
>SB_45281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Frame = +1
Query: 493 ATVAEISKEEKPSATDAE-----GSADSAAIIPNMVKKIDL---APNVESDAAAVPEIKT 648
A+ AE ++EE P T + G+ + P ++ AP + D+ A P
Sbjct: 1167 ASAAEPTQEETPQETPGDQSTEQGNPEVVETPPATAEEPQQGLPAPASQEDSQAQPTETK 1226
Query: 649 PEAADAPKLADNPVDEDKPADISPDA 726
PE A+ DNP + +KP ++S ++
Sbjct: 1227 PEGAE-----DNPENAEKPGEVSKES 1247
>SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 28.7 bits (61), Expect = 5.5
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 10/99 (10%)
Frame = +1
Query: 448 EEPAAQPE-----DSKTEVQATVAEISKEEKPSATDAEGSADSAAI----IPNMVKKIDL 600
EEP PE D K E SK ++ + A + +P VK++
Sbjct: 288 EEPNTDPEEKEGPDEKENADEVFQERSKLDRSPPLRKKHEPFVAPLDDTPVPEPVKEVPA 347
Query: 601 APNVESDA-AAVPEIKTPEAADAPKLADNPVDEDKPADI 714
P + + +K P A AP P D DKPA +
Sbjct: 348 RPVTKQEPFKQTKPVKEPSLAPAPTANMVPSDRDKPAGL 386
>SB_7395| Best HMM Match : SURF6 (HMM E-Value=1.8)
Length = 1365
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 670 KLADNPVDEDKPA-DISPDAPKAEAKSADDSA 762
K +D+ D+DK D+SP AP+ ++ DS+
Sbjct: 683 KFSDSLTDDDKKVKDVSPTAPRRRSRKLSDSS 714
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 28.7 bits (61), Expect = 5.5
Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 5/108 (4%)
Frame = +1
Query: 400 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP- 576
S + P E K D+K +D T ++ + +E KP + A A P
Sbjct: 255 SGDAPHHEEKKEDLKEVVIKQSKQDEATAIKDSKSESKPASKPKLKAVQNDAPKKANKPA 314
Query: 577 ----NMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPA 708
VK+ N + P +A+A + NP + +PA
Sbjct: 315 KKAKKPVKRAKKVLNKKKMDTLPRGAHRPASANAQRRPQNPYAQQRPA 362
>SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069)
Length = 932
Score = 28.7 bits (61), Expect = 5.5
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +1
Query: 481 TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAA 660
T+ QA+ S PSA DA+ S + + A + AA+P +A+
Sbjct: 664 TDAQASRQATSTATIPSAADAQASKPTTPTSATPIATDKQASKQVTPTAAIPIATDIQAS 723
Query: 661 -DAPKLADNPVDED-KPADISPDAPKAEAKSADDSATTA 771
A A P +D +PA + P+A A +A++A
Sbjct: 724 RKASSTATIPGSKDSQPATSTATIPRATNTQAPKTASSA 762
>SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 28.7 bits (61), Expect = 5.5
Identities = 26/86 (30%), Positives = 34/86 (39%)
Frame = +1
Query: 397 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 576
+ S + +AEA EE A+PE T E S E KP A+ E +A A P
Sbjct: 492 RKSPVSEAEAPKPSAAKEE--AEPEQMDTSEPEPAKEPSSEIKPEASKPE-TAKPEATSP 548
Query: 577 NMVKKIDLAPNVESDAAAVPEIKTPE 654
+ P ES A E + E
Sbjct: 549 TDGEPAKPEPAEESSAKPSEEAEIME 574
>SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22)
Length = 1043
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Frame = +1
Query: 445 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAI----IPNMVKKIDLAPNV 612
++E P T + A E+ + D E A P + ++ + ++
Sbjct: 122 LQEEEGNPSLGMTPLTAQPQELKNNPSNAKADTENYAVKKIPHDRDAPTRINRVSVPIHL 181
Query: 613 ESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEA 741
+ D V E E + K A +P+D A+ P +PK EA
Sbjct: 182 DIDTPTVSE--PSEYIEKQKTAYHPIDHRLKANSEPFSPKIEA 222
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 28.7 bits (61), Expect = 5.5
Identities = 27/122 (22%), Positives = 49/122 (40%)
Frame = +1
Query: 403 SEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM 582
SEI S+ + ++ PE+S V A + E KE++ + E D++ + +
Sbjct: 537 SEIIVTATVSSSVGTVTSSSSPEESTKSVCAVLHECKKEDEENDGGDEVFHDASDHLEEV 596
Query: 583 VKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSA 762
+ D + + P+ + K +D E + A S D + A S D+
Sbjct: 597 EESHDKKEDESKEENERPQTRASSRIKR-KASDQTSSESEEAS-SGDEDEIHAHSTDEHD 654
Query: 763 TT 768
TT
Sbjct: 655 TT 656
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 28.3 bits (60), Expect = 7.3
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Frame = +1
Query: 469 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVES---DAAAVPE 639
E E+ E K +T++ G+ + A + + ++ N+E AA++ E
Sbjct: 4395 EGQTLEITDCTVEDEGLYKCVSTNSSGTDTTTARLTVEASRRPISKNIEKLLIKAASMDE 4454
Query: 640 IKTPEA-----ADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATTA 771
+A A++P+L P E KPAD P E ++A+ A
Sbjct: 4455 ESMSQALAKAIAESPELLGEPEPESKPADEPAKEPVEEEALLPETASRA 4503
>SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058)
Length = 1299
Score = 28.3 bits (60), Expect = 7.3
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 10/124 (8%)
Frame = +1
Query: 430 SADIKVEEPAAQ-PEDSKTEVQATVAEISK----EEKPSATDAEGSADSAAIIPNM---- 582
++D +V PA P S +V + +++ + PSA+D ++D + P+
Sbjct: 453 TSDDQVTPPARDVPTTSDDQVTPSASDVQTATYDQVTPSASDVPTTSDDQ-VTPSASDVL 511
Query: 583 -VKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDS 759
K + P+ D + TP +D P +D+ V +D+ + SA D
Sbjct: 512 TAKDDQVTPSARDDPTTSDDQVTPSDSDVPTTSDDQVTL-SASDVPTTSDDQITPSASDV 570
Query: 760 ATTA 771
TT+
Sbjct: 571 PTTS 574
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 28.3 bits (60), Expect = 7.3
Identities = 26/110 (23%), Positives = 43/110 (39%)
Frame = +1
Query: 439 IKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVES 618
++ E+P+ + E + + S E P+A S S++I+P + ES
Sbjct: 1619 LQQEQPSTSDRSTLPETLSXIKNTSPESLPAAEPLSTSDRSSSILPEPSTTDATTSHHES 1678
Query: 619 DAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATT 768
AA P T ++ P+ P D P AE S D ++T
Sbjct: 1679 LPAAEPLSTTDRSSTLPE----PSTTDATTS-HESLPAAEPFSTSDRSST 1723
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = +1
Query: 511 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESD--AAAVPEIKTPEAADAPKLADN 684
SKE+KP A + + A +P++ P + SD P+ + P AP L
Sbjct: 418 SKEKKPPAPLPKAHNEKIAPLPSLRASAATLPPLPSDEPPPLPPDEEKPPPPPAPALPPL 477
Query: 685 PVDEDKPADISPDAPKAEAK 744
P+ + P P K
Sbjct: 478 PLPPELPGSPGDSPPATSPK 497
>SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/84 (22%), Positives = 32/84 (38%)
Frame = +1
Query: 451 EPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAA 630
+PA+QP A+ +P++ A A A P A S A+
Sbjct: 46 QPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPAS 105
Query: 631 VPEIKTPEAADAPKLADNPVDEDK 702
P ++ A + P++ + V E K
Sbjct: 106 QPASQSASAQNKPRIVEKEVLEKK 129
>SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1207
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 577 NMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDA 726
N V DL N ++ + +P E D P +D P P D+SP++
Sbjct: 909 NKVTNSDLTIN--TNQSTLPREPVNEGYDNPTFSDYPDGSPSPKDVSPES 956
>SB_43840| Best HMM Match : NDK (HMM E-Value=0)
Length = 786
Score = 27.9 bits (59), Expect = 9.6
Identities = 24/110 (21%), Positives = 47/110 (42%)
Frame = +1
Query: 436 DIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVE 615
DI+VE+ A ++ +++A A +S E P + A+ V ++ V
Sbjct: 520 DIEVEQ--AVSTEAVPDIEAEQA-VSTEAVPDIEAEQAVKAEQAVSTEAVPDMEAEQAVS 576
Query: 616 SDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSAT 765
++A VP+I+ +A + D D+ + PD +A +S +
Sbjct: 577 TEA--VPDIEADQAVSTEAVPDIEADQAVSTEAVPDIEADQAAVVKESGS 624
>SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1918
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/57 (24%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +1
Query: 430 SADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII--PNMVKKI 594
SA + A++ D ++++ + A+ K+E+ SAT + ++S+ ++ P+ ++KI
Sbjct: 196 SATHRTLSAASRDLDKRSDISLSSAKPEKQEQESATVEQPESESSTMVLYPHQIQKI 252
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 27.9 bits (59), Expect = 9.6
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +1
Query: 403 SEIPDAEAKSADI-KVEEPAAQ-PEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 576
+E P E K + KVE+P + PE K EV+ V+ KP G + P
Sbjct: 1013 NEKPVEEEKQPEKPKVEKPEVEEPEVEKPEVEEPVSG-----KPEVETPVGEVPQEVLAP 1067
Query: 577 NMVKKIDLAPNVESDAAAVPEIKTPEAADA 666
V+ ++ AP D P + P+ DA
Sbjct: 1068 VTVEVVETAPITLEDMK--PTGEAPKVVDA 1095
>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
Length = 157
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 634 PEIKTPEAADAPKLADNPVD--EDKPADISPDAPKAEAKSADDSATTAK 774
PE K PE K D P D EDKP D D P+A+ + + K
Sbjct: 95 PE-KKPEDKPEDKPEDKPEDKQEDKPEDKQEDKPEAKPEDKPEDEPEEK 142
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.310 0.126 0.342
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,109,057
Number of Sequences: 59808
Number of extensions: 293797
Number of successful extensions: 1370
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1327
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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