Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0558
         (775 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187044-1|AAO39758.1|   87|Anopheles gambiae putative antennal ...    27   0.64 
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    25   2.0  

>AY187044-1|AAO39758.1|   87|Anopheles gambiae putative antennal
           carrier protein AP-2 protein.
          Length = 87

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = +1

Query: 565 AIIPNMVKKIDLAPNVESDAAAVPEIKTPEAA-DAPKLADNPVDEDKPADISPDAPKAEA 741
           A++     + D A +   DA    ++K   A  DAPKL  + V    P D +     A  
Sbjct: 11  ALVCAAYAQTDAAKDAAKDAT--DKVKDKAALPDAPKLDKDAVTTPDPKDAAKKVEDAAG 68

Query: 742 KSADDSATTAK 774
           K+ D +A   K
Sbjct: 69  KAKDQAAEVGK 79


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +1

Query: 622 AAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPK--AEAKSADDSATTA 771
           A A P      AA AP     P+D+D PA  +  A      A  A+ +AT+A
Sbjct: 237 ATASPVATAALAAGAPATVSTPMDKDDPAAAAAPATAEVPGAVVANPAATSA 288


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.310    0.126    0.342 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,947
Number of Sequences: 2352
Number of extensions: 9129
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)