Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0558
(775 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g29060.1 68417.m04157 elongation factor Ts family protein sim... 43 2e-04
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 40 0.001
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 39 0.004
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 36 0.030
At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /... 36 0.030
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 36 0.039
At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide famil... 34 0.091
At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide famil... 34 0.091
At4g31880.1 68417.m04531 expressed protein 34 0.12
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 32 0.37
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 32 0.37
At5g26200.1 68418.m03118 mitochondrial substrate carrier family ... 32 0.49
At4g26630.1 68417.m03837 expressed protein 31 0.64
At3g49990.1 68416.m05466 expressed protein 31 0.64
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 31 0.85
At1g34590.1 68414.m04299 hypothetical protein 31 0.85
At1g12080.2 68414.m01397 expressed protein 31 0.85
At5g63550.1 68418.m07976 expressed protein 31 1.1
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 30 1.5
At2g37390.1 68415.m04585 heavy-metal-associated domain-containin... 30 2.0
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 30 2.0
At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to ... 30 2.0
At5g03380.1 68418.m00291 heavy-metal-associated domain-containin... 29 2.6
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate... 29 2.6
At1g20530.1 68414.m02558 hypothetical protein 29 2.6
At3g43530.1 68416.m04621 hypothetical protein contains Pfam prof... 29 3.4
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 29 3.4
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 29 3.4
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 29 3.4
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 29 3.4
At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putati... 29 3.4
At1g12080.1 68414.m01396 expressed protein 29 3.4
At2g45800.1 68415.m05696 LIM domain-containing protein similar t... 29 4.5
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 4.5
At5g61610.1 68418.m07731 glycine-rich protein / oleosin similar ... 28 6.0
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to... 28 6.0
At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containi... 28 6.0
At5g09480.1 68418.m01097 hydroxyproline-rich glycoprotein family... 28 7.9
At2g22795.1 68415.m02704 expressed protein 28 7.9
At2g02170.1 68415.m00153 remorin family protein contains Pfam do... 28 7.9
At1g04810.1 68414.m00477 26S proteasome regulatory subunit, puta... 28 7.9
>At4g29060.1 68417.m04157 elongation factor Ts family protein
similar to SP|P35019 Elongation factor Ts (EF-Ts)
{Galdieria sulphuraria}; contains Pfam profiles PF00627:
UBA/TS-N domain, PF00889: Elongation factor TS, PF00575:
S1 RNA binding domain
Length = 953
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Frame = +1
Query: 400 SSEIPDAEAKSADIKVEE-PAAQ-PEDSKTEVQATVAEISKEEKPSATDAEGSADSAAI- 570
S+E+ ++ A++ EE P+++ P+ + EV AT AE EK T+ +A A
Sbjct: 381 SAEVEESVCVPAEVTSEEVPSSETPKVVEEEVIATKAEDDSPEKEEQTETLAAAAEAEEV 440
Query: 571 ---IPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPAD-ISPDAPKAE 738
IP + ++ N +A E+ +PEA + ++ V + P D + AP
Sbjct: 441 VPPIPETKSEEEIVENSIPPNSATDEVSSPEALASEEVEKEQVVAETPVDEVKTPAPVVT 500
Query: 739 AKSADDSATTA 771
S+++S TA
Sbjct: 501 EASSEESGNTA 511
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/117 (22%), Positives = 57/117 (48%)
Frame = +1
Query: 412 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 591
P A AK+ +K ++ ++ +DS +E + +K KP+A D+ S D + + +
Sbjct: 141 PAAAAKNGSVKAKKESSSEDDSSSEDEPAKKPAAKIAKPAAKDSSSSDDDS----DEDSE 196
Query: 592 IDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSA 762
+ ++ AA + +++D +D +++KPA D ++ S+D+S+
Sbjct: 197 DEKPATKKAAPAAAKAASSSDSSDED--SDEESEDEKPAQKKADTKASKKSSSDESS 251
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Frame = +1
Query: 415 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA-------TDAEGSADSAAII 573
+ E + +K EE A E +K E++ + ++ EEK S T GSA + I
Sbjct: 260 ELETEVEVVKAEETAEATEQAKVELEGKLEDVIVEEKDSEINSKDEKTSESGSALCSEEI 319
Query: 574 PNMVKKIDLAPNVESDAAAVPEIKTPEAA--DAPKLADNPVDEDKPADISPD-APKAEAK 744
+ +++ + P E++ A I E A + + D P +E+KP++ S +P+
Sbjct: 320 LSTIQESNTDPIKETEGDASYPIDVIEKAITEEKHVVDEPANEEKPSESSAALSPEKVVP 379
Query: 745 SADDSATTAK 774
DS T K
Sbjct: 380 INQDSDTKPK 389
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 35.9 bits (79), Expect = 0.030
Identities = 44/155 (28%), Positives = 61/155 (39%), Gaps = 2/155 (1%)
Frame = +1
Query: 283 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEA-KSADIKVEEPA 459
E+P PE K ++ P+ +I K EIP E K +I +
Sbjct: 110 ELPKFPEIPKPEL-PKMPEIPKPELPKVPEIQKPELP-KMPEIPKPELPKFPEIPKPDLP 167
Query: 460 AQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM-VKKIDLAPNVESDAAAVP 636
PE+SK EV + E K E P + IP + K+ P +E A VP
Sbjct: 168 KFPENSKPEVPKLM-ETEKPEAPKVPE----------IPKPELPKLPEVPKLE--APKVP 214
Query: 637 EIKTPEAADAPKLADNPVDEDKPADISPDAPKAEA 741
EI+ PE P+L P + P+ PK EA
Sbjct: 215 EIQKPELPKMPELPKMPEIQKPELPKLPEVPKLEA 249
Score = 32.3 bits (70), Expect = 0.37
Identities = 40/135 (29%), Positives = 53/135 (39%)
Frame = +1
Query: 283 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAA 462
E+P +PE K + AP+ +I K E+P K +I+ E
Sbjct: 237 ELPKLPEVPKLE-APKVPEIQKPELPKMPELPKMPEIQKP-ELP----KMPEIQKPELPK 290
Query: 463 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEI 642
PE K E+ TV E+ K E P + IP V K +L E AVPEI
Sbjct: 291 VPEVPKPELP-TVPEVPKSEAPKFPEIP--KPELPKIPE-VPKPELPKVPEITKPAVPEI 346
Query: 643 KTPEAADAPKLADNP 687
PE P+L P
Sbjct: 347 PKPELPTMPQLPKLP 361
Score = 30.3 bits (65), Expect = 1.5
Identities = 33/112 (29%), Positives = 45/112 (40%)
Frame = +1
Query: 403 SEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM 582
+E P+A K +I E PE K E V EI K E P + + I
Sbjct: 183 TEKPEAP-KVPEIPKPELPKLPEVPKLEAPK-VPEIQKPELPKMPELPKMPE---IQKPE 237
Query: 583 VKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAE 738
+ K+ P +E A VPEI+ PE P+L P + P+ K E
Sbjct: 238 LPKLPEVPKLE--APKVPEIQKPELPKMPELPKMPEIQKPELPKMPEIQKPE 287
>At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to SEC14-like protein 2
(Alpha-tocopherol associated protein) (TAP) (bTAP)
(Fragment) (SP:P58875) {Bos taurus}
Length = 683
Score = 35.9 bits (79), Expect = 0.030
Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Frame = +1
Query: 412 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA-----TDAEGSADSAAIIP 576
P E K + K EE + E+ KTE ++ AE +EEK +A T E + A I
Sbjct: 123 PVKEEKVEEKKTEETEEKKEEVKTEEKSLEAETKEEEKSAAPATVETKKEEILAAPAPIV 182
Query: 577 NMVKKID--LAP-NVESDAAA--VPEIKTPEAAD-APKLADNPVDED-KPADISPDAP-K 732
KK + +AP VE+ AA V E K E AP + V+E P + +P AP
Sbjct: 183 AETKKEETPVAPAPVETKPAAPVVAETKKEEILPAAPVTTETKVEEKVVPVETTPAAPVT 242
Query: 733 AEAKSADDSA 762
E K + +A
Sbjct: 243 TETKEEEKAA 252
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 35.5 bits (78), Expect = 0.039
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 2/113 (1%)
Frame = +1
Query: 427 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPS-ATDAEGSADSAAIIPNMVKKIDLA 603
K K E+P +PE K E A ++ KP + + S+ P K +
Sbjct: 469 KQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESSKQEPPKPEESPKPEPP 528
Query: 604 PNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI-SPDAPKAEAKSADDS 759
ES P+ +TP+ ++PK + KP + P PK E ++S
Sbjct: 529 KPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEES 581
>At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 34.3 bits (75), Expect = 0.091
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 406 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 585
E+ E ++K EEPA E +KTE T E KEE T +G A++
Sbjct: 133 EVKTKEIPVEEVKAEEPAKTEEPAKTE--GTSGE--KEEIVEET-KKGETPETAVVEEKK 187
Query: 586 KKIDLAPNVESDAAAVPE--IKTPEAADAPKLADNP 687
+++ + A AV E +K PE +A+ P
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKEPETTTTAPVAEPP 223
>At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 34.3 bits (75), Expect = 0.091
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 406 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 585
E+ E ++K EEPA E +KTE T E KEE T +G A++
Sbjct: 133 EVKTKEIPVEEVKAEEPAKTEEPAKTE--GTSGE--KEEIVEET-KKGETPETAVVEEKK 187
Query: 586 KKIDLAPNVESDAAAVPE--IKTPEAADAPKLADNP 687
+++ + A AV E +K PE +A+ P
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKEPETTTTAPVAEPP 223
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 33.9 bits (74), Expect = 0.12
Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 7/125 (5%)
Frame = +1
Query: 397 KSSEIPDAEAK-SADIKVEEPAAQPEDSKTEVQATVAE---ISKEEKPSATDAEGSADSA 564
K E E K SA I EE + +P S+ +V + S + KP+ ++ S
Sbjct: 456 KKKESSTEEVKPSASIATEEVSEEPNTSEPQVTKKSGKKVASSSKTKPTVPPSKKSTSET 515
Query: 565 AIIPNMVKKIDLAPNVESDAAAVPEIKTP---EAADAPKLADNPVDEDKPADISPDAPKA 735
+ KK+ + N + E K P +A D L + D +KPA S
Sbjct: 516 KVAKQSEKKVVGSDNAQESTKPKEEKKKPGRGKAIDEESLHTSSGDNEKPAVSSGKLASK 575
Query: 736 EAKSA 750
K A
Sbjct: 576 SKKEA 580
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +1
Query: 421 EAKSADIKVEE--PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI 594
E + ++KVEE PA + + +A E EEKP AE + + A+
Sbjct: 145 EETTTEVKVEEEKPAVPAAEEEKSSEAAPVETKSEEKPE-EKAEVTTEKASSAEE----- 198
Query: 595 DLAPNVESDAAAVPEIKTPEAADAPKLADN-PVDEDKPAD 711
D VE+ ++ + PE+A AP + + V E +P +
Sbjct: 199 DGTKTVEAIEESIVSVSPPESAVAPVVVETVAVAEAEPVE 238
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats, Pfam:PF00560;
contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 32.3 bits (70), Expect = 0.37
Identities = 25/120 (20%), Positives = 47/120 (39%)
Frame = +1
Query: 400 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 579
SSE S+ + P P + T VQA + P+ + + S A P
Sbjct: 696 SSEPTQVPTPSSSESYQAPNLSPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPI 755
Query: 580 MVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDS 759
+ PN + + P + E +P+ ++ V+ +P ++P + + + S D S
Sbjct: 756 LEPVHAPTPNSKPVQSPTP---SSEPVSSPEQSEE-VEAPEPTPVNPSSVPSSSPSTDTS 811
>At5g26200.1 68418.m03118 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 342
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -3
Query: 218 LTESSILGATSRIG*AGTTSFSSATGIAKLTAAKA 114
+T+SS+ AT R+G + TTS + A G A LT+A A
Sbjct: 112 ITKSSVGQATVRLGLSDTTSLAVANGAAGLTSAVA 146
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 31.5 bits (68), Expect = 0.64
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Frame = +1
Query: 469 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA--PNVESDAAAVPEI 642
ED+K ++ T + + EKPS A + K D+A N+E DA +
Sbjct: 3 EDTKATIEPTANKTTSLEKPSEAMAGKENAGGKETQELAKDEDMAEPDNMEIDAQIKKDD 62
Query: 643 KTPEAAD----APKLADNPVDE--DKPADISPDAPKAEAKSADDSATTAK 774
+ E D K DN + ++ +++ D +AEA + D+ A K
Sbjct: 63 EKAETEDKESEVKKNEDNAETQKMEEKVEVTKDEGQAEATNMDEDADGKK 112
>At3g49990.1 68416.m05466 expressed protein
Length = 502
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 409 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 546
+P A+ D+K E P A+P KT Q + E K+E+ +A AE
Sbjct: 422 LPGRRAEQTDVKAEIPKAEPIKRKTHGQESKEE--KKERKNAVKAE 465
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 31.1 bits (67), Expect = 0.85
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 6/130 (4%)
Frame = +1
Query: 394 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQ------ATVAEISKEEKPSATDAEGSA 555
A SS+ E K K EE ++Q E + E + ++ E SKEE+P + E S+
Sbjct: 322 ASSSQDESKEEKPERKKKEESSSQGEGKEEEPEKREKEDSSSQEESKEEEPENKEKEASS 381
Query: 556 DSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKA 735
N +K+ ++ ES + E K E + + +K + +
Sbjct: 382 SQE---ENEIKETEIKEKEESSSQEGNENKETEKKSSESQRKENTNSEKKIEQVESTDSS 438
Query: 736 EAKSADDSAT 765
+ D+ T
Sbjct: 439 NTQKGDEQKT 448
>At1g34590.1 68414.m04299 hypothetical protein
Length = 820
Score = 31.1 bits (67), Expect = 0.85
Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 1/118 (0%)
Frame = +1
Query: 409 IPDAEAKSADIKVEEPAAQPEDSKT-EVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 585
IPDA A D + P A PE S+ V A S DA ++ +IP+
Sbjct: 436 IPDAAAP-VDAGLISPRAAPEASRDGNVIPDAAAPVDAGLISLRDAPEASRDGNVIPDAA 494
Query: 586 KKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDS 759
+D AP+ +A P + EA A ++D + D K K S
Sbjct: 495 APVDAAPSEAQEAE--PSVAASEAVVALPVSDTAAGKRVRVDDESSKKKKTKKKTSGS 550
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 538 DAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLA-DNPVDEDKPADI 714
DA D+ I P + NV DAAA + DAP+ + D V D A +
Sbjct: 438 DAAAPVDAGLISPRAAPEASRDGNVIPDAAAPVDAGLISLRDAPEASRDGNVIPDAAAPV 497
Query: 715 SPDAPKAEAKSADDSATTAK 774
DA +EA+ A+ S ++
Sbjct: 498 --DAAPSEAQEAEPSVAASE 515
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 31.1 bits (67), Expect = 0.85
Identities = 22/88 (25%), Positives = 43/88 (48%)
Frame = +1
Query: 400 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 579
+ E+ EA+ D + E+ + +D KTEV + +EEK AE ++ A++
Sbjct: 57 NEEVVVEEAEKKDEETEKKTEE-KDEKTEVITETPVVEEEEK----KAEEVTETPAVVEE 111
Query: 580 MVKKIDLAPNVESDAAAVPEIKTPEAAD 663
KK ++ +++ AA E+ +A +
Sbjct: 112 -EKKTEVVEEKQTEVAAAEEVAVEKAEE 138
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 406 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 585
E D + + +++VE+P+ + SK V+ + K+++PS A+GSA S +
Sbjct: 320 EKTDTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPS---AKGSARSGEKSSKQI 376
Query: 586 KKIDLAP 606
K +P
Sbjct: 377 AKSTSSP 383
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439: Bromodomain
Length = 1210
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 592 IDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATTA 771
ID A + + + E+ +P+AA+ A +P D D+ P P EA + D S +
Sbjct: 1075 IDSAADKSQNQDSGQEMPSPDAANPQSAAPSPTDGDREDQSEP--PSKEASAEDMSGDSC 1132
Query: 772 K 774
K
Sbjct: 1133 K 1133
>At2g37390.1 68415.m04585 heavy-metal-associated domain-containing
protein contains Pfam PF00403: Heavy-metal-associated
domain; similar to copper homeostasis factor (CCH)
(ATX1) (GB:U88711) (TIGR_Ath1:At3g56240) [Arabidopsis
thaliana]
Length = 259
Score = 29.9 bits (64), Expect = 2.0
Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 10/130 (7%)
Frame = +1
Query: 409 IPDAEAKSAD--IKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM 582
I D AD IK+ A E S +++ S + S T G +AA++ +
Sbjct: 46 IKDGRRSFADDFIKLPTSAEDGEMSNKKLEIYKGRRSITGRRS-TGGGGGGGAAALLKLI 104
Query: 583 VKKIDLAPNVESDAA--AVPEIKTPEAADAPKLADNP------VDEDKPADISPDAPKAE 738
I LA S A A IKTP + L +P VD+D + +AP E
Sbjct: 105 TNDIGLARKSFSCVARPACDLIKTPVGSTRYLLGSDPDSITGSVDQDPAKTVEAEAPAGE 164
Query: 739 AKSADDSATT 768
K+ + TT
Sbjct: 165 DKTLTEKKTT 174
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Frame = +1
Query: 454 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI--DLAPNVESDAA 627
P++ PE+ ++ E+ PS++ S + P + +P S +
Sbjct: 71 PSSSPEEDSPLAPSSSPEVDSPLAPSSSPEVDSPQPPSSSPEADSPLPPSSSPEANSPQS 130
Query: 628 AVPEIKTPEAADAPKLADNPVDEDKPADIS-PDAPKAEAKSADDS 759
K AD+P P + P+ S P+ A S DDS
Sbjct: 131 PASSPKPESLADSPSPPPPPPQPESPSSPSYPEPAPVPAPSDDDS 175
>At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to
DEIH-box RNA/DNA helicase GB:BAA84364 GI:5881579
[Arabidopsis thaliana]
Length = 1576
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Frame = +1
Query: 514 KEEKPSATDAEGSADSAAIIPNMVK-----KIDLAPNVESDAAAVPEIK---TPEAADAP 669
K+E S + + ++ +I N+V +++AP ++ AA PE K + +
Sbjct: 1306 KKEPKSVSKLDLGSEKVSIPSNLVNGNEQHDLNIAPGEDASAAKQPEKKRSRSKKRKSGN 1365
Query: 670 KLADNPVDEDKPADISPDAPKAEAKSADD 756
L +++ KP+D++ + + E KSA++
Sbjct: 1366 NLDLGKMEKSKPSDLANENEQTEPKSANN 1394
>At5g03380.1 68418.m00291 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP2
[GI:4097545]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 392
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/86 (20%), Positives = 38/86 (44%)
Frame = +1
Query: 499 VAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLA 678
V ++ + K + G+ D + + KI + S A P+ +TP ++ +
Sbjct: 51 VEDVKIDYKSNKLTVIGNVDPVEVRDKVADKIKRPVELVSTVAP-PKKETPPSSGGAEKK 109
Query: 679 DNPVDEDKPADISPDAPKAEAKSADD 756
+P E+KPA+ P A + + ++
Sbjct: 110 PSPAAEEKPAEKKPAAVEKPGEKKEE 135
>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
contains weak similarity to vacuolar calcium binding
protein [Raphanus sativus] gi|9049359|dbj|BAA99394
Length = 152
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKV-EEPA 459
E P + E KKD+ AP ++ + K E+ + + + A + V EE
Sbjct: 73 ETPEVVEIKKDEEAPVETPVV---VEDESKTEEVVEAKKEEEVEEKKTEEAPVVVEEEKK 129
Query: 460 AQPEDSKTEVQATV-AEISKEEK 525
+ E+ K V+A+V A + K ++
Sbjct: 130 PEAEEEKPAVEASVTAPVEKADE 152
>At1g20530.1 68414.m02558 hypothetical protein
Length = 614
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 592 IDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSAD 753
++ P+VES+A PE +PE+ + + D D P D + E + D
Sbjct: 60 VESPPDVESEADESPETYSPESCSSAHSVTSS-DSDLPPKFDSDCEEGEGTNCD 112
>At3g43530.1 68416.m04621 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 615
Score = 29.1 bits (62), Expect = 3.4
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Frame = +1
Query: 415 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDA-EGS---------ADSA 564
+ E + + ++++ AQ D++ EV EI KE +D +G+ A+S
Sbjct: 441 EREVREKETEIDKEVAQG-DNEREVGEKETEIDKEVGQGDSDIFDGNKDMELNKEVAEST 499
Query: 565 AIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAK 744
+ K ++ + + A EI PE+ ++AD+ D++ P D D K
Sbjct: 500 IGVAESEKDKEVTESEKDKEVAESEIGVPESEKDIEVADSEKDKEVPQDDEMDGGKVTEP 559
Query: 745 S 747
S
Sbjct: 560 S 560
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 442 KVEEPAAQPEDSKTE-VQATVAEISKEEKPSATDAEG--SADSAAIIPNMVKKIDLAPNV 612
K E + P+ + + V E SK+ K + + +A A ++P+ I AP+V
Sbjct: 344 KPSESTSHPDSLNDKTISENVQESSKDAKVDSEACQNHPTASPATVVPDQDSTITAAPSV 403
Query: 613 ESDAAAVPEIKTP 651
+ +A KTP
Sbjct: 404 TQEDSAFNTEKTP 416
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 442 KVEEPAAQPEDSKTE-VQATVAEISKEEKPSATDAEG--SADSAAIIPNMVKKIDLAPNV 612
K E + P+ + + V E SK+ K + + +A A ++P+ I AP+V
Sbjct: 605 KPSESTSHPDSLNDKTISENVQESSKDAKVDSEACQNHPTASPATVVPDQDSTITAAPSV 664
Query: 613 ESDAAAVPEIKTP 651
+ +A KTP
Sbjct: 665 TQEDSAFNTEKTP 677
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +1
Query: 598 LAPNVESDAAAVPEIKTPEA----ADAPK-LADNPVDEDKPADISPDAP 729
L+P S A VP +P+ AD P+ L+ P D KP+ S +AP
Sbjct: 127 LSPKPPSPRAEVPRSLSPKPPSPRADLPRSLSPKPFDRSKPSSASANAP 175
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +1
Query: 598 LAPNVESDAAAVPEIKTPEA----ADAPK-LADNPVDEDKPADISPDAP 729
L+P S A VP +P+ AD P+ L+ P D KP+ S +AP
Sbjct: 126 LSPKPPSPRAEVPRSLSPKPPSPRADLPRSLSPKPFDRSKPSSASANAP 174
>At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putative
similar to SP|P50855 Riboflavin biosynthesis protein
ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25);
3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
synthase)] {Actinobacillus pleuropneumoniae}; contains
Pfam profiles PF00925: GTP cyclohydrolase II, PF00926:
3,4-dihydroxy-2-butanone 4-phosphate synthase
Length = 476
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 544 EGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPD 723
EG S++ I+L P++ S E+ P D+P++ D D D+P D
Sbjct: 50 EGDVFSSSKSNGSSMGIELQPDLVSFGTLAAEM-IPTTMDSPEVEDEEFDLDRPTDGFAS 108
Query: 724 APKA 735
P+A
Sbjct: 109 IPQA 112
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = +1
Query: 397 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 576
K+ E E + D + E+ + +D KTEV + +EEK AE ++ A++
Sbjct: 22 KTVEETVVETEKKDEETEKKTEE-KDEKTEVITETPVVEEEEK----KAEEVTETPAVVE 76
Query: 577 NMVKKIDLAPNVESDAAAVPEIKTPEAAD 663
KK ++ +++ AA E+ +A +
Sbjct: 77 E-EKKTEVVEEKQTEVAAAEEVAVEKAEE 104
>At2g45800.1 68415.m05696 LIM domain-containing protein similar to
PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain
protein PLIM1 [Nicotiana tabacum] GI:5932418; contains
Pfam profile PF00412: LIM domain
Length = 226
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 280 DEVPAIPEAKKDDIAPE 330
D+ +IPEAK+DD APE
Sbjct: 197 DDTASIPEAKEDDAAPE 213
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = +1
Query: 394 AKSSEIPDAEAKSADIKVEEPAAQPED-------SKTEVQATVAEISKEEKPSATDAEGS 552
A E P AE ++ VEE AAQPE + E + A K++K + E
Sbjct: 308 AALGETPAAERPASSTPVEEKAAQPEPVAPVENAGEKEGEEETAAAKKKKKKKEKEKEKK 367
Query: 553 ADSAAIIPNMVK 588
A +AA + V+
Sbjct: 368 AAAAAAATSSVE 379
>At5g61610.1 68418.m07731 glycine-rich protein / oleosin similar to
variable surface lipoprotein Vsp422-3 (GI:15384285)
[Mycoplasma bovis]; similar to glycine-rich protein
atGRP-6, Arabidopsis thaliana, PIR:T49893
Length = 225
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +1
Query: 514 KEEKPSATDAEGSADSAAIIPNMVK--KIDLAPNVESDAAAVPEIKTPEAADAPKLADNP 687
KE+KP D D + N++K K + ++ P+ P P D P
Sbjct: 119 KEDKPPERDKLPRKDKPSKEDNLLKGDKPVEEDKLPAEEEKPPQKDKPAEGHKPPQKDKP 178
Query: 688 VDEDKPADISPDAPKAEAKSAD 753
+ DKP + D P + K A+
Sbjct: 179 AEGDKP--VEEDKPPQKDKPAE 198
>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1158
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 3/117 (2%)
Frame = +1
Query: 421 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATD---AEGSADSAAIIPNMVKK 591
E ADI++ + ++ D+ +A +E + +PS D E + +S + V +
Sbjct: 735 EIADADIEMVDNPSEARDASASTEANGSESEETYEPSDGDTAHVEAAGESKLV---TVME 791
Query: 592 IDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSA 762
+++ SD + E+ T D D V ++P + + D A
Sbjct: 792 VEIPEKTHSD--VIRELDTKAVGDLAAATDLEVVMEEPCIVEGSVETEDPNPGSDEA 846
>At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containing
protein low similarity to CRP1 [Zea mays] GI:3289002;
contains Pfam profile PF01535: PPR repeat
Length = 793
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 416 MLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQKKKNL 529
M K+N+ + K+K ++L LK K YK + K Q + L
Sbjct: 740 MEKKNMFVDKYKYRMLFLKYHKTAYKGKAPKVQSESQL 777
>At5g09480.1 68418.m01097 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family members At5g09530,
At5g09520, At1g44222 [Arabidopsis thaliana]
Length = 144
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 559 SAAIIPNMVKKI-DLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKA 735
S +++ VKK+ + E + PE+ +PE + P+ + P + + P + P+ P+
Sbjct: 35 SHSLVQEEVKKVPEYTEPEEPEVPEEPELPSPEEPEIPEEPEIPEEPEVPGE--PEVPEE 92
Query: 736 EAKSADDSATT 768
+ + +T
Sbjct: 93 PEEPEEPEGST 103
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 27.9 bits (59), Expect = 7.9
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +1
Query: 448 EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAA 627
EE + ++K + +++ E SK+ + T+ + +S++ M K+ + VES +
Sbjct: 426 EESKGKESETKDKEESSSQEESKDRE---TETKEKEESSSQEETMDKETEAKEKVESSSQ 482
Query: 628 AVPEIKTPEAADAPKLAD--NPVDEDKPADISPDAPKAEAKSAD 753
E K E ++ L + DE K + S K E K +
Sbjct: 483 EKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETE 526
>At2g02170.1 68415.m00153 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 486
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 415 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA 564
+AE K ++KVE + +D + AT+ E EEK +A +A+ +A
Sbjct: 411 EAEMKKTEVKVERIKGRAQDRLMKKLATI-ERKAEEKRAAAEAKKDHQAA 459
>At1g04810.1 68414.m00477 26S proteasome regulatory subunit, putative
contains similarity to 26S proteasome regulatory subunit
S1 SP:O88761, GI:3288594 from [Rattus norvegicus]
Length = 1001
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 604 PNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATTAK 774
P +A + K + A+ A+N +E A+ + D +AE+ D +ATT +
Sbjct: 839 PTAVLSTSAKAKAKAKKEAEQKAKAENSGNEAGKANAASDEKEAESMQVDSTATTVE 895
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.310 0.126 0.342
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,034,763
Number of Sequences: 28952
Number of extensions: 197622
Number of successful extensions: 598
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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