Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0557
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 323 9e-89
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 299 2e-81
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 299 2e-81
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 139 2e-33
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 138 3e-33
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 136 1e-32
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 136 1e-32
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 112 2e-25
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 106 1e-23
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 105 3e-23
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 95 3e-20
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 93 1e-19
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 93 1e-19
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 74 1e-13
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 74 1e-13
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 74 1e-13
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 74 1e-13
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 74 1e-13
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 73 3e-13
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 67 1e-11
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 66 2e-11
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 65 6e-11
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 63 2e-10
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 62 5e-10
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 61 7e-10
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 61 9e-10
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 60 2e-09
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 54 8e-08
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 54 1e-07
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 54 1e-07
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 51 1e-06
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 51 1e-06
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 47 2e-05
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 47 2e-05
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 47 2e-05
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 36 0.039
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 36 0.039
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans nonsense-medi... 31 0.83
AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor wi... 31 0.83
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 30 1.5
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 30 1.5
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 30 1.9
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 30 1.9
Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical pr... 29 2.5
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 29 2.5
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 29 3.4
AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical ... 29 3.4
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81069-4|CAB02991.1| 370|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF083232-1|AAD03690.1| 392|Caenorhabditis elegans nuclear recep... 28 7.8
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 28 7.8
AF016438-10|AAK84533.2| 394|Caenorhabditis elegans Nuclear horm... 28 7.8
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 323 bits (793), Expect = 9e-89
Identities = 154/193 (79%), Positives = 169/193 (87%)
Frame = +3
Query: 144 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 323
R Y+ TK+++ Q VA+KSQN+RRLQAQRNELN KVRML+ GSYVGEV K M
Sbjct: 31 RKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVSKAM 90
Query: 324 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 503
DKKKVLVKVHPEGK+VVD+DK++DIN + RVALR +SY LHK+LPNKVDPLVSLMMV
Sbjct: 91 DKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMV 150
Query: 504 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 683
EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLL+GPPGTGKTLLA
Sbjct: 151 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLA 210
Query: 684 RAVAHHTECTFIR 722
RAVAHHTECTFIR
Sbjct: 211 RAVAHHTECTFIR 223
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 299 bits (733), Expect = 2e-81
Identities = 142/193 (73%), Positives = 164/193 (84%)
Frame = +3
Query: 144 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 323
RPY+ TK+E+ + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 26 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 85
Query: 324 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 503
DKKKVLVK HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 86 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 145
Query: 504 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 683
EKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 146 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 205
Query: 684 RAVAHHTECTFIR 722
RAVAHHTECTFIR
Sbjct: 206 RAVAHHTECTFIR 218
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 299 bits (733), Expect = 2e-81
Identities = 142/193 (73%), Positives = 164/193 (84%)
Frame = +3
Query: 144 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 323
RPY+ TK+E+ + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 47 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 106
Query: 324 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 503
DKKKVLVK HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 107 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 166
Query: 504 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 683
EKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 167 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 226
Query: 684 RAVAHHTECTFIR 722
RAVAHHTECTFIR
Sbjct: 227 RAVAHHTECTFIR 239
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 139 bits (337), Expect = 2e-33
Identities = 77/190 (40%), Positives = 114/190 (60%), Gaps = 3/190 (1%)
Frame = +3
Query: 162 KIEELQLIVAEKSQNLRRLQAQ---RNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKK 332
+I++ L+ E QN RL+ Q + E AKV LR VG + + +D +
Sbjct: 70 RIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMA-------VGSLEEIIDDQ 122
Query: 333 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 512
+V + + V++ VD + C V L ++++ + +L + DP+VS+M +EK
Sbjct: 123 HAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKA 182
Query: 513 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 692
P TY VGGLD+QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AV
Sbjct: 183 PQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAV 242
Query: 693 AHHTECTFIR 722
A+ T TF+R
Sbjct: 243 ANQTSATFLR 252
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 138 bits (335), Expect = 3e-33
Identities = 67/130 (51%), Positives = 86/130 (66%)
Frame = +3
Query: 333 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 512
+ L+ V KFVVDL +V D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171
Query: 513 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 692
PD TY VGG QI++++EV+E P+ HPE + LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 693 AHHTECTFIR 722
A+ T+ FIR
Sbjct: 232 ANRTDACFIR 241
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 136 bits (330), Expect = 1e-32
Identities = 69/174 (39%), Positives = 107/174 (61%)
Frame = +3
Query: 201 QNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 380
Q L+ L+ + +E+ + G VGEV+K + ++K +VK ++VV
Sbjct: 33 QKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGC 92
Query: 381 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 560
++++ ++ RV+L + T+ + LP +VDPLV M E + +Y VGGL +QI+
Sbjct: 93 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIR 152
Query: 561 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 722
E++EV+ELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA +C F++
Sbjct: 153 ELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLK 206
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 136 bits (330), Expect = 1e-32
Identities = 69/174 (39%), Positives = 107/174 (61%)
Frame = +3
Query: 201 QNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 380
Q L+ L+ + +E+ + G VGEV+K + ++K +VK ++VV
Sbjct: 41 QKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGC 100
Query: 381 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 560
++++ ++ RV+L + T+ + LP +VDPLV M E + +Y VGGL +QI+
Sbjct: 101 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIR 160
Query: 561 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 722
E++EV+ELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA +C F++
Sbjct: 161 ELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLK 214
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 112 bits (270), Expect = 2e-25
Identities = 53/141 (37%), Positives = 86/141 (60%)
Frame = +3
Query: 300 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 479
+G+ ++ +D+ +V + V + +D + C VAL S L +LP + D
Sbjct: 85 IGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEAD 144
Query: 480 PLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 659
+ ++ ++ PD +Y +GGLD Q +E++E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 145 SSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPP 204
Query: 660 GTGKTLLARAVAHHTECTFIR 722
G GKT+LA+AVA +T +FIR
Sbjct: 205 GCGKTMLAKAVAANTAASFIR 225
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 106 bits (255), Expect = 1e-23
Identities = 47/88 (53%), Positives = 64/88 (72%)
Frame = +3
Query: 459 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 638
+L +K+D VEK P T++ +GG + QI+E+KE +ELP+ HPE ++ +GI PKG
Sbjct: 160 VLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKG 219
Query: 639 VLLYGPPGTGKTLLARAVAHHTECTFIR 722
V+LYG PGTGKTLLA+AVA+ T TFIR
Sbjct: 220 VILYGEPGTGKTLLAKAVANSTSATFIR 247
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 105 bits (252), Expect = 3e-23
Identities = 52/131 (39%), Positives = 79/131 (60%)
Frame = +3
Query: 330 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 509
K ++K + + + VD +++ V + +SY + + LP + D V M V++
Sbjct: 111 KCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDE 170
Query: 510 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 689
P Y +GG DKQI+E+ E + LP+ H + F LGI PKGVL+YGPPGTGKT++ARA
Sbjct: 171 RPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARA 230
Query: 690 VAHHTECTFIR 722
VA T+ TF++
Sbjct: 231 VAAQTKSTFLK 241
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 95.5 bits (227), Expect = 3e-20
Identities = 42/80 (52%), Positives = 60/80 (75%)
Frame = +3
Query: 477 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 656
DP+ E + D Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+GI P+G+LL+GP
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 657 PGTGKTLLARAVAHHTECTF 716
PGTGKTL+ARAVA+ T F
Sbjct: 253 PGTGKTLIARAVANETGSFF 272
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Frame = +3
Query: 390 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 563
+D+ D + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 436 IDLEDDQIDAEV-LNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 494
Query: 564 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 719
++E+++ PV+HPE + G+ +GVL YGPPG GKTLLA+A+A+ + FI
Sbjct: 495 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFI 546
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 93.5 bits (222), Expect = 1e-19
Identities = 40/80 (50%), Positives = 60/80 (75%)
Frame = +3
Query: 477 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 656
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 657 PGTGKTLLARAVAHHTECTF 716
PGTGKTL+ARAVA+ T F
Sbjct: 252 PGTGKTLIARAVANETGAFF 271
Score = 81.0 bits (191), Expect = 8e-16
Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Frame = +3
Query: 390 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 563
+D+ D T + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 435 IDLEDDTIDAEV-LNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 493
Query: 564 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 719
++E+++ PV+HPE + G+ +GVL YGPPG GKTLLA+A+A+ + FI
Sbjct: 494 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFI 545
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 93.5 bits (222), Expect = 1e-19
Identities = 40/80 (50%), Positives = 60/80 (75%)
Frame = +3
Query: 477 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 656
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 657 PGTGKTLLARAVAHHTECTF 716
PGTGKTL+ARAVA+ T F
Sbjct: 252 PGTGKTLIARAVANETGAFF 271
Score = 81.0 bits (191), Expect = 8e-16
Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Frame = +3
Query: 390 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 563
+D+ D T + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 435 IDLEDDTIDAEV-LNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 493
Query: 564 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 719
++E+++ PV+HPE + G+ +GVL YGPPG GKTLLA+A+A+ + FI
Sbjct: 494 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFI 545
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +3
Query: 525 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 704
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 447
Query: 705 EC 710
EC
Sbjct: 448 EC 449
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +3
Query: 525 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 704
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 445
Query: 705 EC 710
EC
Sbjct: 446 EC 447
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +3
Query: 525 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 704
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 447
Query: 705 EC 710
EC
Sbjct: 448 EC 449
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +3
Query: 525 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 704
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 447
Query: 705 EC 710
EC
Sbjct: 448 EC 449
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +3
Query: 525 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 704
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 445
Query: 705 EC 710
EC
Sbjct: 446 EC 447
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +3
Query: 525 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 704
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 447
Query: 705 EC 710
EC
Sbjct: 448 EC 449
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +3
Query: 525 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 704
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN-- 447
Query: 705 EC 710
EC
Sbjct: 448 EC 449
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 72.5 bits (170), Expect = 3e-13
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +3
Query: 471 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 650
++ P + +VP+ ++ +GG ++ EI++ + P KHPE F+ GI P G+LLY
Sbjct: 440 RIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLY 499
Query: 651 GPPGTGKTLLARAVAHHTECTFI 719
GPPG KTL+ARA+A + F+
Sbjct: 500 GPPGCSKTLIARALASEAKMNFL 522
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 630 PKGVLLYGPPGTGKTLLARAVA 695
P VL++G PG+GKTLL + VA
Sbjct: 272 PCSVLIWGLPGSGKTLLLKEVA 293
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +3
Query: 534 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 713
V GL+ K ++E++ LP K P++F + A PKGVLL+GPPGTGKT++ R VA + T
Sbjct: 318 VAGLEGAKKALREIVVLPFKRPDVFTGIR-APPKGVLLFGPPGTGKTMIGRCVASQCKAT 376
Query: 714 F 716
F
Sbjct: 377 F 377
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI-AQPKGVLLYGPPGTGKTLLAR 686
VPD +++ +G L + K+++ I P+K + F ALGI +P+G+LL GPPG GKTLLA+
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAK 586
Query: 687 AVAHHTECTFI 719
AVA+ T FI
Sbjct: 587 AVANETGMNFI 597
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +3
Query: 525 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 695
+E +GG D+Q E+ + + +K P+ F LG+ P+G +++GPPG GKT+ A+AVA
Sbjct: 205 FEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVA 260
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 64.9 bits (151), Expect = 6e-11
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +3
Query: 510 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI-AQPKGVLLYGPPGTGKTLLAR 686
VPD +++ +G L + K+++ I P+K + F ALGI +P+G+LL GPPG GKTLLA+
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAK 586
Query: 687 AVAHHTECTF 716
AVA+ T F
Sbjct: 587 AVANETGMNF 596
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +3
Query: 525 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 695
+E +GG D+Q E+ + + +K P+ F LG+ P+G +++GPPG GKT+ A+AVA
Sbjct: 205 FEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVA 260
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/65 (43%), Positives = 44/65 (67%)
Frame = +3
Query: 525 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 704
++ +GG ++ + E+K+ I LP++ + ++ P+G+LLYGPPG GKTLLA+AVA
Sbjct: 79 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 138
Query: 705 ECTFI 719
C FI
Sbjct: 139 GCRFI 143
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/65 (43%), Positives = 44/65 (67%)
Frame = +3
Query: 525 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 704
++ +GG ++ + E+K+ I LP++ + ++ P+G+LLYGPPG GKTLLA+AVA
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 141
Query: 705 ECTFI 719
C FI
Sbjct: 142 GCRFI 146
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/66 (43%), Positives = 46/66 (69%)
Frame = +3
Query: 522 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 701
T E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A +
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISN 785
Query: 702 TECTFI 719
+ + +
Sbjct: 786 SNFSVV 791
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/66 (43%), Positives = 46/66 (69%)
Frame = +3
Query: 522 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 701
T E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A +
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISN 785
Query: 702 TECTFI 719
+ + +
Sbjct: 786 SNFSVV 791
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/64 (43%), Positives = 45/64 (70%)
Frame = +3
Query: 528 EMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 707
E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A ++
Sbjct: 2 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 61
Query: 708 CTFI 719
+ +
Sbjct: 62 FSVV 65
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 61.3 bits (142), Expect = 7e-10
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Frame = +3
Query: 462 LPNKVDPLVSLMMVEKVPDST---YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP 632
L N VD ++ ++++V D+T + V G ++E + LP +P LF G+ QP
Sbjct: 153 LLNGVDKVIGERLLDEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFK--GLRQP 210
Query: 633 -KGVLLYGPPGTGKTLLARAVAHHTECTF 716
KG+LL+GPPG GKTLLA+AVA ++ F
Sbjct: 211 VKGILLFGPPGNGKTLLAKAVAGESKQMF 239
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 60.9 bits (141), Expect = 9e-10
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = +3
Query: 543 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTF 716
+D+ E++E+++ +K PE + LG PKGVLL GPPGTGKTLLARA+A + F
Sbjct: 206 MDEAKLEVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPF 262
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Frame = +3
Query: 477 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 653
D L +++EK P+ + + GL+ + +KE + LP+K P+LF G +P +G+LL+G
Sbjct: 102 DKLSGAIVMEK-PNVKWTDIAGLEGAKEALKEAVILPIKFPQLFT--GNRKPWQGILLFG 158
Query: 654 PPGTGKTLLARAVAHHT-ECTF 716
PPGTGK+ +A+AVA E TF
Sbjct: 159 PPGTGKSYIAKAVATEAGESTF 180
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 54.4 bits (125), Expect = 8e-08
Identities = 28/62 (45%), Positives = 37/62 (59%)
Frame = +3
Query: 534 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 713
V G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 295 VAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVP 353
Query: 714 FI 719
FI
Sbjct: 354 FI 355
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/65 (43%), Positives = 40/65 (61%)
Frame = +3
Query: 525 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 704
++ V G + EI+E ++ +K+P F LG P+G LL GPPG GKTLLA+A+A +
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 705 ECTFI 719
FI
Sbjct: 343 TVPFI 347
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/65 (43%), Positives = 40/65 (61%)
Frame = +3
Query: 525 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 704
++ V G + EI+E ++ +K+P F LG P+G LL GPPG GKTLLA+A+A +
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 705 ECTFI 719
FI
Sbjct: 343 TVPFI 347
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +3
Query: 513 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 683
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 288 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
Query: 684 RAV 692
R +
Sbjct: 348 RQI 350
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +3
Query: 513 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 683
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 288 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
Query: 684 RAV 692
R +
Sbjct: 348 RQI 350
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +3
Query: 513 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 683
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 222 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 281
Query: 684 RAV 692
R +
Sbjct: 282 RQI 284
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +3
Query: 528 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 701
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 702 TECTF 716
+ TF
Sbjct: 250 SSSTF 254
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +3
Query: 528 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 701
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 702 TECTF 716
+ TF
Sbjct: 250 SSSTF 254
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +3
Query: 528 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 701
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 702 TECTF 716
+ TF
Sbjct: 250 SSSTF 254
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/71 (36%), Positives = 42/71 (59%)
Frame = +3
Query: 507 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 686
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 687 AVAHHTECTFI 719
AVA + F+
Sbjct: 512 AVATEFKIAFL 522
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/71 (36%), Positives = 42/71 (59%)
Frame = +3
Query: 507 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 686
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 687 AVAHHTECTFI 719
AVA + F+
Sbjct: 512 AVATEFKIAFL 522
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/71 (36%), Positives = 42/71 (59%)
Frame = +3
Query: 507 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 686
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 687 AVAHHTECTFI 719
AVA + F+
Sbjct: 512 AVATEFKIAFL 522
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +3
Query: 633 KGVLLYGPPGTGKTLLARAVAHHT 704
+ V+ YGPPGTGKTL A+++A H+
Sbjct: 343 RNVMFYGPPGTGKTLFAKSLAQHS 366
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 35.5 bits (78), Expect = 0.039
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 618 GIAQPKGVLLYGPPGTGKTLLARAVAHH 701
G+ +G L YGPPGTGK+ A+A H
Sbjct: 193 GVPYRRGYLFYGPPGTGKSSFISALASH 220
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 35.5 bits (78), Expect = 0.039
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 618 GIAQPKGVLLYGPPGTGKTLLARAVAHH 701
G+ +G L YGPPGTGK+ A+A H
Sbjct: 239 GVPYRRGYLFYGPPGTGKSSFISALASH 266
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 639 VLLYGPPGTGKTLLARAVAHH 701
+LL GPPGTGKT L + +A H
Sbjct: 175 ILLTGPPGTGKTSLCKGLAQH 195
>AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans
nonsense-mediated mRNA decay trans-acting factor
protein.
Length = 1069
Score = 31.1 bits (67), Expect = 0.83
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 642 LLYGPPGTGKTLLARAVAHH 701
L+ GPPGTGKT+++ + +H
Sbjct: 464 LIQGPPGTGKTVVSATIVYH 483
>AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 2 protein.
Length = 1069
Score = 31.1 bits (67), Expect = 0.83
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 642 LLYGPPGTGKTLLARAVAHH 701
L+ GPPGTGKT+++ + +H
Sbjct: 464 LIQGPPGTGKTVVSATIVYH 483
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 588 VKHPELFDALGIAQPKGVLLYGPPGTGKTL 677
V+H E+ A +A+ K ++L GPPG+GKT+
Sbjct: 2517 VRH-EMLLAAWLAEHKPLVLCGPPGSGKTM 2545
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 588 VKHPELFDALGIAQPKGVLLYGPPGTGKTL 677
V+H E+ A +A+ K ++L GPPG+GKT+
Sbjct: 2517 VRH-EMLLAAWLAEHKPLVLCGPPGSGKTM 2545
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 699 GERQHELIMSFQCPEAHTVRLLLVAQSQGHQTALGASQAAQSPL 568
G H++I + P +++ A S+GH A AS+ AQ P+
Sbjct: 213 GVAPHQVIQQVRAPNIGASQMVQQAPSRGHTGAAPASRMAQQPV 256
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 699 GERQHELIMSFQCPEAHTVRLLLVAQSQGHQTALGASQAAQSPL 568
G H++I + P +++ A S+GH A AS+ AQ P+
Sbjct: 213 GVAPHQVIQQVRAPNIGASQMVQQAPSRGHTGAAPASRMAQQPV 256
>Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical
protein F36A2.9b protein.
Length = 565
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 303 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 389
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical
protein F36A2.9a protein.
Length = 528
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 303 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 389
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 639 VLLYGPPGTGKTLLARAVA 695
+L YGPPGTGKT A A
Sbjct: 65 LLFYGPPGTGKTTTVLAAA 83
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 639 VLLYGPPGTGKTLLARA 689
+L YGPPGTGKT A A
Sbjct: 51 LLFYGPPGTGKTSAALA 67
>AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical
protein C30F12.2 protein.
Length = 445
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 609 DALGIAQPKGVLLYGPPGTGKTLL 680
D I P+G+ LYG G GKT+L
Sbjct: 83 DTPKIISPRGIYLYGSVGCGKTML 106
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = +3
Query: 633 KGVLLY--GPPGTGKTLLARAVA 695
KG++L GPPG GKT +A+A+A
Sbjct: 328 KGMILCFTGPPGIGKTSIAKAIA 350
>Z81069-4|CAB02991.1| 370|Caenorhabditis elegans Hypothetical
protein F25H9.4 protein.
Length = 370
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -2
Query: 239 EFITLGLKTTKI-LRFFGDNEL*LFNLGYVVRAKTLTLHRVHFHFSRESHIALLTLM 72
E IT G KT K+ L DN L+NL YV + T H F F+ E+ + +++++
Sbjct: 203 ELITDG-KTVKVCLALLADNSPILYNLFYVEKPGQTTFH--IFDFTYEAILGMVSIL 256
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 633 KGVLLYGPPGTGKTLLARAVA 695
+ VL+ GPP TGKT +A A++
Sbjct: 83 RAVLIAGPPATGKTAIALAMS 103
>Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical
protein T08G11.4 protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 NDVTANCRVALRNESYTLHK-ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEV 575
N++T C V HK IL N ++ M+EK P+ST+E + K K IK+
Sbjct: 155 NELTKQCEVMKPIYPIDQHKDILENPDYQQITKTMIEKNPESTFEDI--YTKHCKLIKKQ 212
Query: 576 IE 581
E
Sbjct: 213 SE 214
>AF083232-1|AAD03690.1| 392|Caenorhabditis elegans nuclear receptor
NHR-18 protein.
Length = 392
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +3
Query: 393 DINDVTANC-RVALRN-ESYTLHKI-LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 563
D D T N +V N Y + K+ L N L LM + + ++ + KQI +
Sbjct: 316 DALDATENLVQVQANNLHKYYVEKLKLANYSSRLTQLMRITRTLEADIR-IRIEKKQIAD 374
Query: 564 IKEVIELPVKHPELFDA 614
+ ++++ HPE+F+A
Sbjct: 375 VFNIMKIDFSHPEMFEA 391
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 633 KGVLLYGPPGTGKTLLARAVA 695
K + +GPPG GKT +A+++A
Sbjct: 506 KILCFHGPPGVGKTSIAKSIA 526
>AF016438-10|AAK84533.2| 394|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 18 protein.
Length = 394
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +3
Query: 393 DINDVTANC-RVALRN-ESYTLHKI-LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 563
D D T N +V N Y + K+ L N L LM + + ++ + KQI +
Sbjct: 318 DALDATENLVQVQANNLHKYYVEKLKLANYSSRLTQLMRITRTLEADIR-IRIEKKQIAD 376
Query: 564 IKEVIELPVKHPELFDA 614
+ ++++ HPE+F+A
Sbjct: 377 VFNIMKIDFSHPEMFEA 393
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,187,664
Number of Sequences: 27780
Number of extensions: 301798
Number of successful extensions: 1045
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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