Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0556
(439 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4RED6 Cluster: Chromosome 10 SCAF15123, whole genome s... 36 0.29
UniRef50_Q9H7D0 Cluster: Dedicator of cytokinesis protein 5; n=5... 35 0.87
UniRef50_Q0S0X8 Cluster: Putative uncharacterized protein; n=1; ... 33 2.7
UniRef50_Q5ZEH3 Cluster: Putative uncharacterized protein P0504H... 33 3.5
UniRef50_A7QG52 Cluster: Chromosome undetermined scaffold_91, wh... 33 3.5
UniRef50_Q5K9I1 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_Q0JJP4 Cluster: Os01g0726700 protein; n=4; Oryza sativa... 32 4.7
UniRef50_Q3A5P6 Cluster: Putative uncharacterized protein; n=1; ... 32 6.2
UniRef50_Q2SNE7 Cluster: Putative uncharacterized protein; n=1; ... 32 6.2
UniRef50_A7IF76 Cluster: AsmA family protein precursor; n=1; Xan... 32 6.2
UniRef50_Q69L88 Cluster: Putative high-affinity potassium transp... 32 6.2
UniRef50_Q2QV87 Cluster: Expressed protein; n=3; Oryza sativa|Re... 32 6.2
UniRef50_Q5H1U8 Cluster: Homoserine dehydrogenase; n=1; Xanthomo... 31 8.1
UniRef50_Q2RI87 Cluster: Putative uncharacterized protein precur... 31 8.1
UniRef50_A6WF00 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
UniRef50_A4JM99 Cluster: Putative uncharacterized protein; n=3; ... 31 8.1
UniRef50_Q5KL12 Cluster: Putative uncharacterized protein; n=2; ... 31 8.1
>UniRef50_Q4RED6 Cluster: Chromosome 10 SCAF15123, whole genome
shotgun sequence; n=3; Euteleostomi|Rep: Chromosome 10
SCAF15123, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1195
Score = 36.3 bits (80), Expect = 0.29
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = -1
Query: 322 QAERQDHRE*GQRRPPPTWSARPACRAPLLPVTCQTYTQSFRRGKR 185
+A+ ++H G PPP S R AC APL P+ T+ +SF+R R
Sbjct: 972 RADSEEHLVFGPALPPPV-SQRQACHAPLNPLV-NTHLESFKRNPR 1015
>UniRef50_Q9H7D0 Cluster: Dedicator of cytokinesis protein 5; n=51;
Euteleostomi|Rep: Dedicator of cytokinesis protein 5 -
Homo sapiens (Human)
Length = 1870
Score = 34.7 bits (76), Expect = 0.87
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 438 SQTASGKLQSAVSEHQSPTRPGFDGSVTPP-LSSAEPSGARPSARTTASEASEGR 277
S T+S S+ S +P+RPG DGS+ P L SGAR + E SE R
Sbjct: 1674 SVTSSVVSTSSNSSDNAPSRPGSDGSILEPLLERRASSGARVEDLSLREENSENR 1728
>UniRef50_Q0S0X8 Cluster: Putative uncharacterized protein; n=1;
Rhodococcus sp. RHA1|Rep: Putative uncharacterized
protein - Rhodococcus sp. (strain RHA1)
Length = 556
Score = 33.1 bits (72), Expect = 2.7
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 402 SEHQSPTRPGFDGSVTPPLSSAEPSGARPSARTTASEAS 286
S QS +RP PPL EP RPS+R ++S+ S
Sbjct: 321 SWRQSSSRPSSSEPYPPPLPPPEPPSRRPSSRLSSSQPS 359
Score = 31.5 bits (68), Expect = 8.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -2
Query: 402 SEHQSPTRPGFDGSVTPPLSSAEPSGARPSARTTASEASEGR 277
S QS +RP PPL EP RPS+R ++S R
Sbjct: 215 SWRQSSSRPSSSEPYPPPLPPPEPPSRRPSSRLSSSREPSPR 256
>UniRef50_Q5ZEH3 Cluster: Putative uncharacterized protein
P0504H10.12; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0504H10.12 - Oryza sativa subsp. japonica (Rice)
Length = 103
Score = 32.7 bits (71), Expect = 3.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 292 GQRRPPPTWSARPACRAPLLPVTCQTYTQSFRR 194
G+ RP P+ RP AP+ P T TYT + R
Sbjct: 28 GRPRPAPSLLTRPLLTAPMCPATSHTYTAASTR 60
>UniRef50_A7QG52 Cluster: Chromosome undetermined scaffold_91, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_91, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 608
Score = 32.7 bits (71), Expect = 3.5
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 426 SGKLQSAVSEHQSPTRPGFDGSVTPPLSSAEPSGARPSARTTASEASEG 280
S +QS + +Q P P S T ++SA P + SA AS SEG
Sbjct: 204 SEAIQSLIIPNQKPISPSSSSSSTSSIASAVPICPKQSAHEAASAISEG 252
>UniRef50_Q5K9I1 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 486
Score = 32.7 bits (71), Expect = 3.5
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Frame = -3
Query: 221 PNIYPVISAWKAALCTGLARVVPCRIEPYSPLQHVSNSRAA-----ASESRVTGEA-HFL 60
P+ P +SA A TG +R PC I+P P H+S+S + A +S TG++ FL
Sbjct: 389 PSTAP-LSAEAAVSATG-SRPQPCPIQPLDPSSHMSSSSSTSNSEKAMKSTSTGQSTSFL 446
Query: 59 SN*DNVRSRNLLGTG 15
++ + S +L G+G
Sbjct: 447 TDNTSKTSNSLGGSG 461
>UniRef50_Q0JJP4 Cluster: Os01g0726700 protein; n=4; Oryza
sativa|Rep: Os01g0726700 protein - Oryza sativa subsp.
japonica (Rice)
Length = 662
Score = 32.3 bits (70), Expect = 4.7
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = -2
Query: 402 SEHQSPTRPGFDGSVTPPLSSAEPSGARPSARTTASEAS 286
S SPT PG G TP S PS + S+RTT S
Sbjct: 238 SSGSSPTTPGGGGGYTPTPSDTPPSPSSGSSRTTPGGCS 276
>UniRef50_Q3A5P6 Cluster: Putative uncharacterized protein; n=1;
Pelobacter carbinolicus DSM 2380|Rep: Putative
uncharacterized protein - Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1)
Length = 712
Score = 31.9 bits (69), Expect = 6.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 399 EHQSPTRPGFDGSVTPPLSSAEPSGARPSARTTASEASE 283
E +P P DG+ PP+ A ARP+A + S+
Sbjct: 462 EETAPVTPSADGAEAPPMQQACTGAARPTAAAAPEDTSD 500
>UniRef50_Q2SNE7 Cluster: Putative uncharacterized protein; n=1;
Hahella chejuensis KCTC 2396|Rep: Putative
uncharacterized protein - Hahella chejuensis (strain
KCTC 2396)
Length = 506
Score = 31.9 bits (69), Expect = 6.2
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 166 PGLCLAELNLIPLCNMCQTPAPRPPNHASREKRIFFQIKTMFVRGTCWARAR 11
PG AEL +P N C+ + P H RE + + ++ TC ARAR
Sbjct: 419 PGNACAELETLPPPNRCEVAVTKCPAH-PRENWLDATYGSNVIQSTCAARAR 469
>UniRef50_A7IF76 Cluster: AsmA family protein precursor; n=1;
Xanthobacter autotrophicus Py2|Rep: AsmA family protein
precursor - Xanthobacter sp. (strain Py2)
Length = 1331
Score = 31.9 bits (69), Expect = 6.2
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -2
Query: 390 SPTRPGFDGSVTPPLSSAEPSGARPSARTTASEASE 283
+PT G G+ TP S A+ S +RP AR T EA+E
Sbjct: 1243 APTASGAAGTATPAESQAQSSPSRPEARAT-PEAAE 1277
>UniRef50_Q69L88 Cluster: Putative high-affinity potassium
transporter; n=6; Oryza sativa|Rep: Putative
high-affinity potassium transporter - Oryza sativa
subsp. japonica (Rice)
Length = 808
Score = 31.9 bits (69), Expect = 6.2
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 438 SQTASGKLQSAVSEHQSPTRPGFD-GSVTPPLSSAEPSGARPSARTTASEAS 286
S S S+ S SP R S +PP + PSG+R S+RT A AS
Sbjct: 98 SSPTSRPRTSSTSTSASPPRSAAPPSSASPPPPRSAPSGSRTSSRTAAPSAS 149
>UniRef50_Q2QV87 Cluster: Expressed protein; n=3; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 1174
Score = 31.9 bits (69), Expect = 6.2
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -2
Query: 417 LQSAVSEHQSPTRPGFDGSVTPPLSSAEPSGARPSARTT 301
LQS+ +SPT PG + ++TPP S P+ R SA ++
Sbjct: 187 LQSSTPSRRSPTPPG-NKTLTPPRRSPSPASRRMSATSS 224
>UniRef50_Q5H1U8 Cluster: Homoserine dehydrogenase; n=1; Xanthomonas
oryzae pv. oryzae|Rep: Homoserine dehydrogenase -
Xanthomonas oryzae pv. oryzae
Length = 367
Score = 31.5 bits (68), Expect = 8.1
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = -2
Query: 198 GVESGSLHRTSQGCALQN*TLFPSATCVKLPRRGLRITRH-GRSAFSFKLRQCSFAELAG 22
GV + ++ QG AL +A CV RR LR RH GR + R C
Sbjct: 119 GVHVVTANKLGQGTALSRAQALHAACCVSCQRRALRRQRHRGRWVAGVEQRACVGRRRRS 178
Query: 21 HGRD 10
H D
Sbjct: 179 HSFD 182
>UniRef50_Q2RI87 Cluster: Putative uncharacterized protein
precursor; n=1; Moorella thermoacetica ATCC 39073|Rep:
Putative uncharacterized protein precursor - Moorella
thermoacetica (strain ATCC 39073)
Length = 439
Score = 31.5 bits (68), Expect = 8.1
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = -2
Query: 420 KLQSAVSEHQSPTRPGFDGSVTPPLSSAEPSGARPSARTTASEASE 283
++ S+ Q+PT+PG GS PP +S++PS AR S S+ +E
Sbjct: 225 QVNSSQGSQQAPTKPGPAGS--PPPASSQPS-ARTSPSAAPSQPAE 267
>UniRef50_A6WF00 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 242
Score = 31.5 bits (68), Expect = 8.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 390 SPTRPGFDGSVTPPLS--SAEPSGARPSARTTASEASEG 280
SP RPG G V+PP + +A P RP RT A G
Sbjct: 32 SPGRPGPPGPVSPPAAGRAARPPAPRPRRRTPADPPRPG 70
>UniRef50_A4JM99 Cluster: Putative uncharacterized protein; n=3;
Burkholderia cepacia complex|Rep: Putative
uncharacterized protein - Burkholderia vietnamiensis
(strain G4 / LMG 22486) (Burkholderiacepacia (strain
R1808))
Length = 717
Score = 31.5 bits (68), Expect = 8.1
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 381 RPGFDGSVTPPLSSAEPSGA-RPSARTTASEASEGR 277
RPG S TPP+ SA+PS P TT ++ S G+
Sbjct: 261 RPGAAASSTPPVGSAKPSTTPLPKKGTTIAKGSSGK 296
>UniRef50_Q5KL12 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 589
Score = 31.5 bits (68), Expect = 8.1
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 123 LQRGIRFNS-ARHNPG*SGAKSRFPRRNDWVYVWHVTGSKGARHAGRALQVGGGL 284
LQR R+N +H+ + AK + +ND V WH A HA LQ G GL
Sbjct: 86 LQREARWNDLVKHSQEVTYAKDQLDNKNDVVSRWH-----RAAHAASRLQTGDGL 135
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,478,148
Number of Sequences: 1657284
Number of extensions: 8582807
Number of successful extensions: 30709
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 29004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30670
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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