Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0554
         (783 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   6.1  
AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    24   6.1  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 17/77 (22%), Positives = 35/77 (45%)
 Frame = +3

Query: 543  FFSFFQGVIITILVYCGVLKTIFDISDTDTVKIISSKLQDFLICIEMVSGGDSASL*FLV 722
            +F +F   + TI +   ++   F   D    +   + L   ++C+ ++S   S+    ++
Sbjct: 891  YFDYFFTSVFTIELLLKLVSYGFLFHDGAFCRSAFNLLDLLVVCVSLISMFFSSGAISVI 950

Query: 723  QALRVAIGTRRLRVLAR 773
            + LRV    R LR + R
Sbjct: 951  KILRVLRVLRPLRAINR 967


>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 469 KSTKQYIATNCDRL 428
           ++TKQY+AT+C  L
Sbjct: 201 EATKQYVATHCPHL 214


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,412
Number of Sequences: 2352
Number of extensions: 16140
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)