Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0541
(728 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 167 1e-42
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 73 6e-14
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 66 6e-12
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 58 1e-09
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 45 1e-05
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 43 5e-05
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 42 9e-05
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 42 1e-04
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 41 2e-04
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 38 0.001
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 37 0.003
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 37 0.003
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 36 0.008
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 33 0.032
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 28 1.6
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 27 2.7
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 2.7
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.7
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 4.8
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 26 6.3
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 26 6.3
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 6.3
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 6.3
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 8.4
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 8.4
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 167 bits (406), Expect = 1e-42
Identities = 89/171 (52%), Positives = 114/171 (66%), Gaps = 3/171 (1%)
Frame = +2
Query: 224 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 400
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 401 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXT 580
++S WRGN ANV+RYFPTQALNFAFKDK+K++F G ++ + ++F
Sbjct: 87 VISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-GYKKERDGYAKWFAGNLASGGAAGAA 145
Query: 581 SLCFVYPLDFARTRLAADV--GKGDGQREFSGLGNCISKIFKSDGLIGLYR 727
SL FVY LD+ARTRLA D K G+R+F+GL + K ++SDGL GLYR
Sbjct: 146 SLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYR 196
Score = 40.3 bits (90), Expect = 3e-04
Identities = 38/168 (22%), Positives = 66/168 (39%)
Frame = +2
Query: 224 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 403
FA + +GG + A S V ++ + L S + ++++ G+VD + + + GL
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGL 191
Query: 404 LSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTS 583
+RG +V+ + L F D K V L G + F F S
Sbjct: 192 RGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVG-PLEGNFLASFLLGWAVTTGSGVAS 250
Query: 584 LCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYR 727
YPLD R R+ G+ ++S C +I +G ++
Sbjct: 251 ----YPLDTIRRRMMMTSGEA---VKYSSSFECGRQILAKEGARSFFK 291
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 72.5 bits (170), Expect = 6e-14
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Frame = +2
Query: 239 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 418
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+R
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFR 77
Query: 419 GNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC-FV 595
GN N +R FP A+ FA + KQ L K + C
Sbjct: 78 GNGTNCLRAFPYGAVQFATFNMLKQRAL----KNRSHQNLENHERLLFGAIAGAASCATT 133
Query: 596 YPLDFARTRLAAD 634
YPLD ARTRL+ +
Sbjct: 134 YPLDIARTRLSIE 146
Score = 43.6 bits (98), Expect = 3e-05
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +2
Query: 194 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDA 373
K + AD AF K FL GG + + +T P + ++ QV + YK I A
Sbjct: 217 KFFSNADLTAFQKLFL-GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSA 272
Query: 374 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 469
I K +G+ F+RG +N+++ P ++ +
Sbjct: 273 IFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 65.7 bits (153), Expect = 6e-12
Identities = 41/133 (30%), Positives = 66/133 (49%)
Frame = +2
Query: 230 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 409
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHG 77
Query: 410 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC 589
++G+ A + R FP + F ++ ++V + + +T R+ S+
Sbjct: 78 LYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRFL-----SGSLAGTCSVF 132
Query: 590 FVYPLDFARTRLA 628
F YPL+ R RLA
Sbjct: 133 FTYPLELIRVRLA 145
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 58.0 bits (134), Expect = 1e-09
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Frame = +2
Query: 212 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 391
DP F++GGI+ VS+T AP++R+K++L + + + + ++ +
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWN 181
Query: 392 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXX 571
G+ SF+ GN NV++ P ++ F + K+V G+ ++
Sbjct: 182 RNGIRSFFVGNGINVLKVMPESSIKFGTYEAMKRVL--GISSSSENHSPLYSYLAGGMAG 239
Query: 572 XXTSLCFVYPLDFARTRL-AADVGKGDGQREFSGLGNCISKIFKSDGLIGLYR 727
+ F+YP+D + R+ +D+ +G + L N +++KS G+ G YR
Sbjct: 240 SVAQM-FIYPVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYR 289
Score = 48.0 bits (109), Expect = 1e-06
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Frame = +2
Query: 236 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSF 412
+LAGG++ +V++ + P++ +K +Q +S+ Q K I+ + + + K G+ +
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGY 287
Query: 413 WRGNFANVIRYFPTQALNFAFKDKYKQVFLG------GVDKKTQFWRYFXXXXXXXXXXX 574
+RG ++ FP A + + K+ ++G VD +
Sbjct: 288 YRGVLVGILGMFPYSATDLGTFEGLKRTWIGILASRDNVDPQ-DVKLPNGLVMAFGALSG 346
Query: 575 XTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYR 727
T V+PL+ RTRL G + G +C K K++G GLY+
Sbjct: 347 STGATIVFPLNVIRTRLQTQ-GTSAHPATYDGFIDCFYKTTKNEGFRGLYK 396
Score = 41.9 bits (94), Expect = 9e-05
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +2
Query: 245 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 424
G +S + T V P+ ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGL 398
Query: 425 FANVIRYFPTQALNFAFKDKYKQ 493
N+++ P+ A+++ + K+
Sbjct: 399 SPNLLKVAPSVAISYLVYENCKK 421
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 45.2 bits (102), Expect = 1e-05
Identities = 41/171 (23%), Positives = 69/171 (40%)
Frame = +2
Query: 212 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 391
D + F F AG ++ + P++ VK +Q+ V K Y G D +I K
Sbjct: 4 DNIPFPVTFAAGAVAGISEVLTLYPLDVVKTRMQLS-VGKS-----DYNGTFDCLKKIVK 57
Query: 392 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXX 571
+G +RG ++ P +AL FA D Y +++ +K
Sbjct: 58 NEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLWRKVFKRKDS---SPALSILTGSCA 114
Query: 572 XXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 724
T V P + + RL DV +++G +C +KI K + ++ LY
Sbjct: 115 GFTETFVVVPFELMKIRL-QDVKNAS---KYNGTVDCFTKIVKQERILALY 161
Score = 39.5 bits (88), Expect = 5e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 593 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYR 727
+YPLD +TR+ VGK D ++G +C+ KI K++G LYR
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYR 66
Score = 34.3 bits (75), Expect = 0.018
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 227 AKDFLAGGISAAVSKTAVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGL 403
A L G + V P E +K+ LQ V++ SK Y G VD F +I K++ +
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERI 157
Query: 404 LSFWRGNFANVIRYFPTQALNFAFKDKYK 490
L+ + G A + R+ A F K +
Sbjct: 158 LALYNGFEATMWRHVVWNAGYFGVIQKIR 186
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 42.7 bits (96), Expect = 5e-05
Identities = 27/96 (28%), Positives = 52/96 (54%)
Frame = +2
Query: 239 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 418
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G+ SF++
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFK 267
Query: 419 GNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQ 526
G ++ P A+++A + K++ + V K +Q
Sbjct: 268 GIRPRMVVAMPATAVSWAAYEAGKEILI-RVSKTSQ 302
Score = 41.1 bits (92), Expect = 2e-04
Identities = 33/163 (20%), Positives = 72/163 (44%), Gaps = 1/163 (0%)
Frame = +2
Query: 239 LAGGISAAVSKTAVAPIERVKLLLQVQH-VSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 415
LAG S + + + P++ +K +Q+ + VS+ ++ + IV++ ++I +G+ S W
Sbjct: 24 LAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN-----IVNSVIKISSTEGVYSLW 78
Query: 416 RGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFV 595
RG + ++ P+ A+ F+ + +K D+ S F+
Sbjct: 79 RGISSVIMGAGPSHAIYFSVLEFFKSKINASPDRP-------LASALAGACAITISDAFM 131
Query: 596 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 724
P D + R+ R++ +C + +F+++GL Y
Sbjct: 132 TPFDVIKQRMQLP------SRKYKSALHCATTVFRNEGLGAFY 168
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 41.9 bits (94), Expect = 9e-05
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Frame = +2
Query: 221 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 397
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 398 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXX 577
GL +F++G ++ ++ F + K+ F T Y
Sbjct: 70 GLAAFYKGTVLPLLGIGFCVSIQFTTFEYCKRFFSRDGTPVTMPQYY-----VSGAISGL 124
Query: 578 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYR 727
+ V P++ R RL GK + G +CI KI GL G+ +
Sbjct: 125 ANSFLVGPVEHVRIRLQIQTGK---NVLYHGPWDCIKKISSQYGLSGIMK 171
Score = 34.7 bits (76), Expect = 0.014
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 215 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKE 394
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 395 QGLLSFWRG 421
GL +G
Sbjct: 164 YGLSGIMKG 172
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 41.5 bits (93), Expect = 1e-04
Identities = 46/197 (23%), Positives = 78/197 (39%), Gaps = 12/197 (6%)
Frame = +2
Query: 173 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS----KQIA 340
V +T +N SN P + F+AGG++ + A AP++ VK LQ KQ A
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTA 90
Query: 341 ADQ-----RYKGIVDAFV---RIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
+ Y+ +D + + +G + +RG N+I P +++NF K++
Sbjct: 91 KSKSPLTAAYRHFMDTCIILKNVKVHEGTRALFRGLGPNLIGTIPARSINFFSYGNGKRI 150
Query: 497 FLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLG 676
D + P+ +TRL D G + S +
Sbjct: 151 L---ADLFNNGQENSQIHLMAAAIAGVITSAATNPIWLVKTRLQLDKKSGQAAQYRSSI- 206
Query: 677 NCISKIFKSDGLIGLYR 727
+CI K + +G GLY+
Sbjct: 207 DCIIKTIRLEGFRGLYK 223
Score = 30.3 bits (65), Expect = 0.29
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +2
Query: 248 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 427
GI+ ++ P E V+ L+ S I +Y G++ F + EQG++ + G
Sbjct: 280 GIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLT 336
Query: 428 ANVIRYFPTQALNF 469
A+++R P + F
Sbjct: 337 AHLLRVVPNACILF 350
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 40.7 bits (91), Expect = 2e-04
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +2
Query: 230 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQR---YKGIVDAFVRIPKEQG 400
KD +AGG + S VAP++ VK Q Q + G + + I +G
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEG 66
Query: 401 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 520
+ +RG ++ Y P+ ++ F +K K +F GV+KK
Sbjct: 67 IAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNKK 104
Score = 29.5 bits (63), Expect = 0.51
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +2
Query: 338 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDK 517
A Y DAF +I K +GL +F+RG F ++ + F + +K K
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHV-GIQFPLYEYFKSFLDDFFGK 283
Query: 518 KTQF 529
K+ F
Sbjct: 284 KSNF 287
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 37.9 bits (84), Expect = 0.001
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +2
Query: 236 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 415
FL G ++ ++ PI+ VK +Q ++A + YK + +I + GLL FW
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFW 260
Query: 416 RGNFANVIRYFPTQALNFAFKDKYKQV 496
G + R + + F +K ++
Sbjct: 261 SGATPRLARLILSGGIVFTVYEKVMEI 287
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 37.1 bits (82), Expect = 0.003
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 3/137 (2%)
Frame = +2
Query: 326 SKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA---FKDKYKQV 496
+KQ A Q KG F + KE+G+ RG A +R A F +K +
Sbjct: 134 AKQAATGQEVKGTFRVFADLYKEKGIRGINRGVNAVALRQMTNWGSRLALSRFLEKPIRY 193
Query: 497 FLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLG 676
F G +T+ C+ PL+ AR + + + KG Q G+
Sbjct: 194 FTG----RTEAEPLTTGQRFVASVSAGALSCWNQPLEVARVEMQS-LTKGI-QHSSPGIM 247
Query: 677 NCISKIFKSDGLIGLYR 727
I I+K++G+ GLYR
Sbjct: 248 QTIMSIYKNNGIKGLYR 264
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 236 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 412
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I + +G+
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGL 86
Query: 413 WRG 421
RG
Sbjct: 87 QRG 89
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 35.5 bits (78), Expect = 0.008
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +2
Query: 239 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 418
LAGGIS+ + + +AP + +K+ +Q+ S + F +++G+ + WR
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS-----------LRPVFKETVQKEGVRALWR 69
Query: 419 GNFANVIRYFPTQALNFAFKDKYKQV 496
GN + Y A F K K +
Sbjct: 70 GNVVAELLYLVYGAAEFVAFSKLKHL 95
Score = 28.7 bits (61), Expect = 0.90
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +2
Query: 239 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 418
L+G I+ A SK + P++ V LQ YK D F+ I + G+ +R
Sbjct: 197 LSGVIAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYR 248
Query: 419 GNFANVIRYFP 451
G ++++ P
Sbjct: 249 GLSVSMLKVAP 259
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 33.5 bits (73), Expect = 0.032
Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 6/104 (5%)
Frame = +2
Query: 230 KDFLAGGISAAVSKT--AVAPIERVKLLLQVQHVSK-QIAADQRYKGIVDAFVRIPKEQG 400
KD L GG + V K P + +QV K + A K + D + G
Sbjct: 167 KDHLVGGCADGVIKVWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVSADSSG 226
Query: 401 LLSFWRGNFANVIRYFP---TQALNFAFKDKYKQVFLGGVDKKT 523
+ FW G F + + F AL VF G+D+KT
Sbjct: 227 AVKFWNGKFFTLSQSFKLHLADALCLGVSANGDMVFSSGIDRKT 270
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = -1
Query: 659 HAGHLPYRHRRQDGYVRSQGGTRSTERWLRRHHRRPDYQRSNARTASSCQRRR 501
H P R R +D RS +RS R HR DY RS ++ + RR
Sbjct: 140 HQSRSPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRR 189
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 2.7
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +2
Query: 239 LAGGISAAVSKTAVAPIERVKLLLQV--QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 412
+AG + +S T V+PIE + +Q H A + + + D + ++G+L+
Sbjct: 141 IAGASARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANE-VFDGLKLMIHQKGILNL 199
Query: 413 WRGNFANVIRYFPTQALNFAFKDKYKQVFLG 505
W G + R P A + ++ + LG
Sbjct: 200 WSGVSVTLWRDVPFSAFYWWSYERIRLFLLG 230
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.1 bits (57), Expect = 2.7
Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 2/114 (1%)
Frame = +2
Query: 194 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDA 373
K L P + L G ++ + +A+ P++ +K QV Y G +
Sbjct: 13 KTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVN--------PNIYPGNIAG 64
Query: 374 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD--KYKQVFLGGVDKKTQF 529
F I ++GL + G +I Y + F + K+K L G K ++
Sbjct: 65 FKTILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEY 118
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 591 SCTPLTSHVPVLPPMSVREMASVNSPVSETASARSSSP 704
S TP+T P +PP S ++ P S +++ SSSP
Sbjct: 297 STTPVT---PTVPPTSTSSTSTPPPPASTSSTGTSSSP 331
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 591 SCTPLTSHVPVLPPMSVREMASVNSPVSETASARSSSP 704
S TP+T P +PP S ++ P S +++ SSSP
Sbjct: 351 STTPVT---PTVPPTSTSSTSTPPPPASTSSTGTSSSP 385
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 73 YEITPNLLFKNQELVFRDPPSACAATPTSTY 165
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 591 SCTPLTSHVP--VLPPMSVREMASVNSPVSETASARSSSPTV 710
S TPL+S LPP+ + S N P S +S SP+V
Sbjct: 360 SLTPLSSRPAHTSLPPIPTVQTTSSNVPPVNRPSLKSKSPSV 401
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 588 ASCTPLTSHVPVLPPMSVREMASVNSPVSETASARSSS 701
+S TP+T+ VP + SPV T+S +SS
Sbjct: 94 SSSTPITASVPTSSSILSNSTIPTTSPVPTTSSTPTSS 131
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 591 SCTPLTSHVPVLPPMSVREMASVNSPVSETASARSSSPTV 710
S T T++VP++P A +PVS S S PTV
Sbjct: 711 SATSPTTNVPIVPEAVHLSTAFSTAPVSTIVSNISPLPTV 750
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 378 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 271
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.4 bits (53), Expect = 8.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 597 TPLTSHVPVLPPMSVREMASVNSPVSETASARSSSP 704
TP H P PP VR S + P + A SS+P
Sbjct: 737 TPAVKHHP--PPPPVRSSISPSMPPAPLTHANSSTP 770
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 362 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 454
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,770,306
Number of Sequences: 5004
Number of extensions: 54611
Number of successful extensions: 248
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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