Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0540
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    25   2.1  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    25   2.8  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       23   8.4  

>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = +2

Query: 152 LHFYMMVGLIPAGALIFYCNVFIGPAQLT----PIPEGYTPK 265
           L +YM   LI    +  +CN       LT    P+PEGY PK
Sbjct: 232 LFYYMHQQLIARYNVERFCNRLARVRPLTNLREPLPEGYFPK 273


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = +2

Query: 152 LHFYMMVGLIPAGALIFYCNVFIGPAQLT----PIPEGYTPK 265
           L +YM   LI    +  +CN       LT    P+PEGY PK
Sbjct: 233 LFYYMHQQLIARYNVDRFCNRLSRVRPLTSLREPLPEGYFPK 274


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
 Frame = +2

Query: 146 DMLHFYMMVGLIPAGALIFYCNVFIGPAQL-TPIPEGYTPKYWEYHRHPITRFIARYIHN 322
           D LH +   G       I +C + +  +    P P   TP  +E+H +    F+ R   +
Sbjct: 314 DDLHVFHDSGRTRLNGFIQHCYLAVSESGSGIPAPPD-TPSEFEFHANRPFMFLIRRTMD 372

Query: 323 NPQQDYEKFMHFLDEEQQ 376
                   F  ++D ++Q
Sbjct: 373 GNVLQVGNFSKYIDPDEQ 390


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,093
Number of Sequences: 2352
Number of extensions: 15781
Number of successful extensions: 69
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)